RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 LRFN2Q9ULH4 789 aa11.71□□□□□ -0.53
PDLIM5-217ENST00000512274 PCDHB12Q9Y5F1 795 aa11.71□□□□□ -0.53
PDLIM5-217ENST00000512274 VPS13AQ96RL7 3174 aa11.71□□□□□ -0.53
PDLIM5-217ENST00000512274 FNDC1Q4ZHG4 1894 aaPredicted RBP11.7□□□□□ -0.54
PDLIM5-217ENST00000512274 FRMPD4Q14CM0 1322 aa11.7□□□□□ -0.54
PDLIM5-217ENST00000512274 A0A1B0GVL5 298 aa11.7□□□□□ -0.54
PDLIM5-217ENST00000512274 NOP56O00567 594 aaKnown RBP11.7□□□□□ -0.54
PDLIM5-217ENST00000512274 NEMFO60524 1076 aa11.7□□□□□ -0.54
PDLIM5-217ENST00000512274 MYL1P05976 194 aa11.7□□□□□ -0.54
PDLIM5-217ENST00000512274 OR52Z1P0C646 297 aa11.7□□□□□ -0.54
PDLIM5-217ENST00000512274 STAG3L1P0CL83 205 aa11.7□□□□□ -0.54
PDLIM5-217ENST00000512274 CD52P31358 61 aa11.7□□□□□ -0.54
PDLIM5-217ENST00000512274 FXR2P51116 673 aaKnown RBP eCLIP11.7□□□□□ -0.54
PDLIM5-217ENST00000512274 HSD17B4P51659 736 aa11.7□□□□□ -0.54
PDLIM5-217ENST00000512274 ATXN1P54253 815 aaKnown RBP11.7□□□□□ -0.54
PDLIM5-217ENST00000512274 MGAT3Q09327 533 aa11.7□□□□□ -0.54
PDLIM5-217ENST00000512274 PDIA5Q14554 519 aa11.7□□□□□ -0.54
PDLIM5-217ENST00000512274 ZNF174Q15697 407 aa11.7□□□□□ -0.54
PDLIM5-217ENST00000512274 FBXO47Q5MNV8 452 aa11.7□□□□□ -0.54
PDLIM5-217ENST00000512274 NT5DC1Q5TFE4 455 aa11.7□□□□□ -0.54
PDLIM5-217ENST00000512274 CES5AQ6NT32 575 aa11.7□□□□□ -0.54
PDLIM5-217ENST00000512274 KRBA2Q6ZNG9 492 aa11.7□□□□□ -0.54
PDLIM5-217ENST00000512274 NPAS4Q8IUM7 802 aa11.7□□□□□ -0.54
PDLIM5-217ENST00000512274 SIX5Q8N196 739 aa11.7□□□□□ -0.54
PDLIM5-217ENST00000512274 KCTD17Q8N5Z5 321 aa11.7□□□□□ -0.54
PDLIM5-217ENST00000512274 SPATA20Q8TB22 786 aa11.7□□□□□ -0.54
PDLIM5-217ENST00000512274 RASGRP4Q8TDF6 673 aa11.7□□□□□ -0.54
PDLIM5-217ENST00000512274 RTP3Q9BQQ7 232 aa11.7□□□□□ -0.54
PDLIM5-217ENST00000512274 CSRNP2Q9H175 543 aa11.7□□□□□ -0.54
PDLIM5-217ENST00000512274 CUEDC2Q9H467 287 aa11.7□□□□□ -0.54
PDLIM5-217ENST00000512274 AGO3Q9H9G7 860 aaKnown RBP11.7□□□□□ -0.54
PDLIM5-217ENST00000512274 MAGEF1Q9HAY2 307 aa11.7□□□□□ -0.54
PDLIM5-217ENST00000512274 ERVK-5Q9HDB9 667 aa11.7□□□□□ -0.54
PDLIM5-217ENST00000512274 CDY2AQ9Y6F7 541 aa11.7□□□□□ -0.54
PDLIM5-217ENST00000512274 DCDC2BA2VCK2 349 aa11.69□□□□□ -0.54
PDLIM5-217ENST00000512274 HIDE1A8MVS5 230 aa11.69□□□□□ -0.54
PDLIM5-217ENST00000512274 FSCN2O14926 492 aa11.69□□□□□ -0.54
PDLIM5-217ENST00000512274 SLFN14P0C7P3 912 aa11.69□□□□□ -0.54
PDLIM5-217ENST00000512274 HOXB8P17481 243 aaPredicted RBP11.69□□□□□ -0.54
PDLIM5-217ENST00000512274 MCM7P33993 719 aa11.69□□□□□ -0.54
PDLIM5-217ENST00000512274 ADAM17P78536 824 aa11.69□□□□□ -0.54
PDLIM5-217ENST00000512274 UBE3AQ05086 875 aa11.69□□□□□ -0.54
PDLIM5-217ENST00000512274 Q4G0T1 1027 aa11.69□□□□□ -0.54
PDLIM5-217ENST00000512274 TPRNQ4KMQ1 711 aa11.69□□□□□ -0.54
PDLIM5-217ENST00000512274 CT47A1Q5JQC4 288 aaPredicted RBP11.69□□□□□ -0.54
PDLIM5-217ENST00000512274 KCNV1Q6PIU1 500 aa11.69□□□□□ -0.54
PDLIM5-217ENST00000512274 DTHD1Q6ZMT9 781 aa11.69□□□□□ -0.54
PDLIM5-217ENST00000512274 TSHZ1Q6ZSZ6 1077 aa11.69□□□□□ -0.54
PDLIM5-217ENST00000512274 MCF2L2Q86YR7 1114 aa11.69□□□□□ -0.54
PDLIM5-217ENST00000512274 CRIPAKQ8N1N5 446 aa11.69□□□□□ -0.54
PDLIM5-217ENST00000512274 C12orf76Q8N812 135 aaPredicted RBP11.69□□□□□ -0.54
PDLIM5-217ENST00000512274 IGSF22Q8N9C0 903 aa11.69□□□□□ -0.54
PDLIM5-217ENST00000512274 TDRD5Q8NAT2 981 aaKnown RBP11.69□□□□□ -0.54
PDLIM5-217ENST00000512274 DNAJB3Q8WWF6 145 aa11.69□□□□□ -0.54
PDLIM5-217ENST00000512274 CLIC6Q96NY7 704 aa11.69□□□□□ -0.54
PDLIM5-217ENST00000512274 ANO3Q9BYT9 981 aa11.69□□□□□ -0.54
PDLIM5-217ENST00000512274 ENTPD7Q9NQZ7 604 aa11.69□□□□□ -0.54
PDLIM5-217ENST00000512274 KIAA1468Q9P260 1216 aa11.69□□□□□ -0.54
PDLIM5-217ENST00000512274 TELO2Q9Y4R8 837 aa11.69□□□□□ -0.54
PDLIM5-217ENST00000512274 GVINP1Q7Z2Y8 2422 aa11.69□□□□□ -0.54
PDLIM5-217ENST00000512274 DMXL1Q9Y485 3027 aa11.68□□□□□ -0.54
PDLIM5-217ENST00000512274 TBKBP1A7MCY6 615 aa11.68□□□□□ -0.54
PDLIM5-217ENST00000512274 ACTN4O43707 911 aaKnown RBP11.68□□□□□ -0.54
PDLIM5-217ENST00000512274 HOXA13P31271 388 aaPredicted RBP11.68□□□□□ -0.54
PDLIM5-217ENST00000512274 TXLNAP40222 546 aa11.68□□□□□ -0.54
PDLIM5-217ENST00000512274 SP4Q02446 784 aa11.68□□□□□ -0.54
PDLIM5-217ENST00000512274 E2F4Q16254 413 aa11.68□□□□□ -0.54
PDLIM5-217ENST00000512274 SPECC1Q5M775 1068 aa11.68□□□□□ -0.54
PDLIM5-217ENST00000512274 RARS2Q5T160 578 aaKnown RBP11.68□□□□□ -0.54
PDLIM5-217ENST00000512274 KIAA0319Q5VV43 1072 aa11.68□□□□□ -0.54
PDLIM5-217ENST00000512274 JAKMIP3Q5VZ66 844 aa11.68□□□□□ -0.54
PDLIM5-217ENST00000512274 ZDHHC14Q8IZN3 488 aa11.68□□□□□ -0.54
PDLIM5-217ENST00000512274 TRIML1Q8N9V2 468 aa11.68□□□□□ -0.54
PDLIM5-217ENST00000512274 COLGALT1Q8NBJ5 622 aa11.68□□□□□ -0.54
PDLIM5-217ENST00000512274 IL31RAQ8NI17 732 aa11.68□□□□□ -0.54
PDLIM5-217ENST00000512274 FAM200AQ8TCP9 573 aa11.68□□□□□ -0.54
PDLIM5-217ENST00000512274 CASP10Q92851 521 aa11.68□□□□□ -0.54
PDLIM5-217ENST00000512274 TCF25Q9BQ70 676 aa11.68□□□□□ -0.54
PDLIM5-217ENST00000512274 BPIFA3Q9BQP9 254 aa11.68□□□□□ -0.54
PDLIM5-217ENST00000512274 PDCD2LQ9BRP1 358 aa11.68□□□□□ -0.54
PDLIM5-217ENST00000512274 RAB34Q9BZG1 259 aa11.68□□□□□ -0.54
PDLIM5-217ENST00000512274 ADAM7Q9H2U9 754 aa11.68□□□□□ -0.54
PDLIM5-217ENST00000512274 KCNMB3Q9NPA1 279 aa11.68□□□□□ -0.54
PDLIM5-217ENST00000512274 AAASQ9NRG9 546 aa11.68□□□□□ -0.54
PDLIM5-217ENST00000512274 DBR1Q9UK59 544 aaKnown RBP11.68□□□□□ -0.54
PDLIM5-217ENST00000512274 STK24Q9Y6E0 443 aa11.68□□□□□ -0.54
PDLIM5-217ENST00000512274 FANCMQ8IYD8 2048 aa11.68□□□□□ -0.54
PDLIM5-217ENST00000512274 SPDYE3A6NKU9 549 aa11.67□□□□□ -0.54
PDLIM5-217ENST00000512274 GCOM1H8Y6P7 765 aaPredicted RBP11.67□□□□□ -0.54
PDLIM5-217ENST00000512274 CCNT1O60563 726 aaKnown RBP11.67□□□□□ -0.54
PDLIM5-217ENST00000512274 POLR2MP0CAP2 368 aa11.67□□□□□ -0.54
PDLIM5-217ENST00000512274 RFX1P22670 979 aa11.67□□□□□ -0.54
PDLIM5-217ENST00000512274 CA8P35219 290 aa11.67□□□□□ -0.54
PDLIM5-217ENST00000512274 DEKP35659 375 aaKnown RBP11.67□□□□□ -0.54
PDLIM5-217ENST00000512274 MTHFRP42898 656 aa11.67□□□□□ -0.54
PDLIM5-217ENST00000512274 GRIN1Q05586 938 aa11.67□□□□□ -0.54
PDLIM5-217ENST00000512274 TYRO3Q06418 890 aa11.67□□□□□ -0.54
PDLIM5-217ENST00000512274 PGM5Q15124 567 aa11.67□□□□□ -0.54
PDLIM5-217ENST00000512274 IL17AQ16552 155 aa11.67□□□□□ -0.54
PDLIM5-217ENST00000512274 LETM2Q2VYF4 491 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms