RNA–Protein interactions for RNA: ENST00000511914.1

HOXA4-203, Transcript of homeobox A4, humanhuman

TSL 1 (best)

Gene HOXA4, Length 982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-203ENST00000511914 CERS4Q9HA82 394 aa11.5□□□□□ -0.57
HOXA4-203ENST00000511914 VTA1Q9NP79 307 aa11.5□□□□□ -0.57
HOXA4-203ENST00000511914 TRMT13Q9NUP7 481 aaKnown RBP11.5□□□□□ -0.57
HOXA4-203ENST00000511914 IMPACTQ9P2X3 320 aa11.5□□□□□ -0.57
HOXA4-203ENST00000511914 CTNND2Q9UQB3 1225 aa11.5□□□□□ -0.57
HOXA4-203ENST00000511914 PPME1Q9Y570 386 aa11.5□□□□□ -0.57
HOXA4-203ENST00000511914 PCDHA2Q9Y5H9 948 aa11.5□□□□□ -0.57
HOXA4-203ENST00000511914 SLC4A7Q9Y6M7 1214 aa11.5□□□□□ -0.57
HOXA4-203ENST00000511914 COL4A4P53420 1690 aaPredicted RBP11.49□□□□□ -0.57
HOXA4-203ENST00000511914 IGKV6D-21A0A0A0MT36 114 aa11.49□□□□□ -0.57
HOXA4-203ENST00000511914 RFXAPO00287 272 aa11.49□□□□□ -0.57
HOXA4-203ENST00000511914 EIF3DO15371 548 aaKnown RBP eCLIP11.49□□□□□ -0.57
HOXA4-203ENST00000511914 TBCAO75347 108 aaKnown RBP11.49□□□□□ -0.57
HOXA4-203ENST00000511914 SERPINC1P01008 464 aa11.49□□□□□ -0.57
HOXA4-203ENST00000511914 SUPT20HL2P0C7V6 817 aa11.49□□□□□ -0.57
HOXA4-203ENST00000511914 CYP2C9P11712 490 aa11.49□□□□□ -0.57
HOXA4-203ENST00000511914 SCP2P22307 547 aa11.49□□□□□ -0.57
HOXA4-203ENST00000511914 YWHABP31946 246 aaKnown RBP11.49□□□□□ -0.57
HOXA4-203ENST00000511914 RARRES1P49788 294 aa11.49□□□□□ -0.57
HOXA4-203ENST00000511914 UBASH3AP57075 661 aa11.49□□□□□ -0.57
HOXA4-203ENST00000511914 NKX3-2P78367 333 aa11.49□□□□□ -0.57
HOXA4-203ENST00000511914 ALCAMQ13740 583 aa11.49□□□□□ -0.57
HOXA4-203ENST00000511914 SKIV2LQ15477 1246 aaKnown RBP11.49□□□□□ -0.57
HOXA4-203ENST00000511914 CCDC62Q6P9F0 684 aa11.49□□□□□ -0.57
HOXA4-203ENST00000511914 METTL7BQ6UX53 244 aa11.49□□□□□ -0.57
HOXA4-203ENST00000511914 SEPT14Q6ZU15 432 aa11.49□□□□□ -0.57
HOXA4-203ENST00000511914 BANK1Q8NDB2 785 aa11.49□□□□□ -0.57
HOXA4-203ENST00000511914 SCFD2Q8WU76 684 aa11.49□□□□□ -0.57
HOXA4-203ENST00000511914 REEP2Q9BRK0 252 aa11.49□□□□□ -0.57
HOXA4-203ENST00000511914 RUSC1Q9BVN2 902 aa11.49□□□□□ -0.57
HOXA4-203ENST00000511914 SLC39A2Q9NP94 309 aa11.49□□□□□ -0.57
HOXA4-203ENST00000511914 PKD2L1Q9P0L9 805 aa11.49□□□□□ -0.57
HOXA4-203ENST00000511914 WRAP73Q9P2S5 460 aaPredicted RBP11.49□□□□□ -0.57
HOXA4-203ENST00000511914 LIMA1Q9UHB6 759 aaKnown RBP11.49□□□□□ -0.57
HOXA4-203ENST00000511914 KCNG1Q9UIX4 513 aa11.49□□□□□ -0.57
HOXA4-203ENST00000511914 LOXHD1Q8IVV2 1947 aa11.48□□□□□ -0.57
HOXA4-203ENST00000511914 TRIP12Q14669 1992 aaPredicted RBP11.48□□□□□ -0.57
HOXA4-203ENST00000511914 RBM47A0AV96 593 aaKnown RBP11.48□□□□□ -0.57
HOXA4-203ENST00000511914 FAM13AO94988 1023 aa11.48□□□□□ -0.57
HOXA4-203ENST00000511914 PTMAP06454 111 aaKnown RBP11.48□□□□□ -0.57
HOXA4-203ENST00000511914 MYL3P08590 195 aa11.48□□□□□ -0.57
HOXA4-203ENST00000511914 PRKCSHP14314 528 aaPredicted RBP11.48□□□□□ -0.57
HOXA4-203ENST00000511914 ATP2A2P16615 1042 aaKnown RBP11.48□□□□□ -0.57
HOXA4-203ENST00000511914 UBA1P22314 1058 aaKnown RBP11.48□□□□□ -0.57
HOXA4-203ENST00000511914 EEF1GP26641 437 aaKnown RBP11.48□□□□□ -0.57
HOXA4-203ENST00000511914 ABCD1P33897 745 aa11.48□□□□□ -0.57
HOXA4-203ENST00000511914 KCNQ1P51787 676 aa11.48□□□□□ -0.57
HOXA4-203ENST00000511914 GSDMDP57764 484 aa11.48□□□□□ -0.57
HOXA4-203ENST00000511914 SP2Q02086 613 aa11.48□□□□□ -0.57
HOXA4-203ENST00000511914 TTLL4Q14679 1199 aa11.48□□□□□ -0.57
HOXA4-203ENST00000511914 BMT2Q1RMZ1 405 aa11.48□□□□□ -0.57
HOXA4-203ENST00000511914 FILIP1LQ4L180 1135 aa11.48□□□□□ -0.57
HOXA4-203ENST00000511914 XKR3Q5GH77 459 aa11.48□□□□□ -0.57
HOXA4-203ENST00000511914 IQSEC1Q6DN90 963 aa11.48□□□□□ -0.57
HOXA4-203ENST00000511914 PADI6Q6TGC4 694 aa11.48□□□□□ -0.57
HOXA4-203ENST00000511914 EPM2AIP1Q7L775 607 aaPredicted RBP11.48□□□□□ -0.57
HOXA4-203ENST00000511914 EXOC8Q8IYI6 725 aa11.48□□□□□ -0.57
HOXA4-203ENST00000511914 RPUSD2Q8IZ73 545 aaKnown RBP11.48□□□□□ -0.57
HOXA4-203ENST00000511914 SEPT1Q8WYJ6 367 aa11.48□□□□□ -0.57
HOXA4-203ENST00000511914 VWCEQ96DN2 955 aa11.48□□□□□ -0.57
HOXA4-203ENST00000511914 TSG101Q99816 390 aa11.48□□□□□ -0.57
HOXA4-203ENST00000511914 C17orf75Q9HAS0 396 aa11.48□□□□□ -0.57
HOXA4-203ENST00000511914 PARVGQ9HBI0 331 aa11.48□□□□□ -0.57
HOXA4-203ENST00000511914 SAMSN1Q9NSI8 373 aaKnown RBP11.48□□□□□ -0.57
HOXA4-203ENST00000511914 IFNKQ9P0W0 207 aa11.48□□□□□ -0.57
HOXA4-203ENST00000511914 DDX41Q9UJV9 622 aaKnown RBP11.48□□□□□ -0.57
HOXA4-203ENST00000511914 MAFBQ9Y5Q3 323 aaPredicted RBP11.48□□□□□ -0.57
HOXA4-203ENST00000511914 UBE4BO95155 1302 aa11.48□□□□□ -0.57
HOXA4-203ENST00000511914 IGSF9BQ9UPX0 1349 aa11.47□□□□□ -0.57
HOXA4-203ENST00000511914 A0A1B0GTH6 734 aa11.47□□□□□ -0.57
HOXA4-203ENST00000511914 CA3P07451 260 aa11.47□□□□□ -0.57
HOXA4-203ENST00000511914 ATP1A3P13637 1013 aa11.47□□□□□ -0.57
HOXA4-203ENST00000511914 SLC26A2P50443 739 aa11.47□□□□□ -0.57
HOXA4-203ENST00000511914 STX17P56962 302 aa11.47□□□□□ -0.57
HOXA4-203ENST00000511914 CHMP4BP1P59074 171 aa11.47□□□□□ -0.57
HOXA4-203ENST00000511914 FKBP3Q00688 224 aaKnown RBP11.47□□□□□ -0.57
HOXA4-203ENST00000511914 EDRF1Q3B7T1 1238 aa11.47□□□□□ -0.57
HOXA4-203ENST00000511914 ZCWPW2Q504Y3 356 aa11.47□□□□□ -0.57
HOXA4-203ENST00000511914 TCP11X2Q5H9J9 407 aa11.47□□□□□ -0.57
HOXA4-203ENST00000511914 FAM47CQ5HY64 1035 aa11.47□□□□□ -0.57
HOXA4-203ENST00000511914 CELF3Q5SZQ8 465 aaKnown RBP11.47□□□□□ -0.57
HOXA4-203ENST00000511914 FAM160B1Q5W0V3 765 aa11.47□□□□□ -0.57
HOXA4-203ENST00000511914 ANKRD40Q6AI12 368 aa11.47□□□□□ -0.57
HOXA4-203ENST00000511914 SWSAP1Q6NVH7 229 aa11.47□□□□□ -0.57
HOXA4-203ENST00000511914 CYFIP1Q7L576 1253 aa11.47□□□□□ -0.57
HOXA4-203ENST00000511914 DRC7Q8IY82 874 aa11.47□□□□□ -0.57
HOXA4-203ENST00000511914 CSGALNACT2Q8N6G5 542 aa11.47□□□□□ -0.57
HOXA4-203ENST00000511914 ZNF507Q8TCN5 953 aa11.47□□□□□ -0.57
HOXA4-203ENST00000511914 AFAP1L1Q8TED9 768 aa11.47□□□□□ -0.57
HOXA4-203ENST00000511914 DRC1Q96MC2 740 aa11.47□□□□□ -0.57
HOXA4-203ENST00000511914 CEP63Q96MT8 703 aa11.47□□□□□ -0.57
HOXA4-203ENST00000511914 CCDC43Q96MW1 224 aaKnown RBP11.47□□□□□ -0.57
HOXA4-203ENST00000511914 DUSP9Q99956 384 aaKnown RBP11.47□□□□□ -0.57
HOXA4-203ENST00000511914 XPO4Q9C0E2 1151 aaKnown RBP11.47□□□□□ -0.57
HOXA4-203ENST00000511914 ST6GALNAC4Q9H4F1 302 aa11.47□□□□□ -0.57
HOXA4-203ENST00000511914 LARSQ9P2J5 1176 aaKnown RBP11.47□□□□□ -0.57
HOXA4-203ENST00000511914 MAGEC2Q9UBF1 373 aaPredicted RBP11.47□□□□□ -0.57
HOXA4-203ENST00000511914 MAPK8IP1Q9UQF2 711 aa11.47□□□□□ -0.57
HOXA4-203ENST00000511914 PCDHA11Q9Y5I1 949 aa11.47□□□□□ -0.57
HOXA4-203ENST00000511914 NPHP3-ACAD11A0A0J9YXS1 232 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms