RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 OR6P1Q8NGX9 317 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 PGBD4Q96DM1 585 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 ZNF302Q9NR11 478 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 TXLNGQ9NUQ3 528 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 PCDHA5Q9Y5H7 936 aa6.16□□□□□ -1.42
USP38-203ENST00000511739 CLTAP09496 248 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 DCCP43146 1447 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 PLTPP55058 493 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 NME3Q13232 169 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 MED21Q13503 144 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 ARHGEF7Q14155 803 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 TFDP2Q14188 446 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 ELF2Q15723 593 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 ARHGAP15Q53QZ3 475 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 AARS2Q5JTZ9 985 aaKnown RBP6.15□□□□□ -1.42
USP38-203ENST00000511739 SPATA1Q5VX52 437 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 FAM129AQ9BZQ8 928 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 ALDH8A1Q9H2A2 487 aaPredicted RBP6.15□□□□□ -1.42
USP38-203ENST00000511739 RUBCNLQ9H714 662 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 ADCY9O60503 1353 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 HIST1H2AGP0C0S8 130 aaPredicted RBP6.15□□□□□ -1.42
USP38-203ENST00000511739 HIST1H2ADP20671 130 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 SPP2Q13103 211 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 NECTIN1Q15223 517 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 TRIP13Q15645 432 aaPredicted RBP6.15□□□□□ -1.42
USP38-203ENST00000511739 ZKSCAN8Q15776 578 aaPredicted RBP6.15□□□□□ -1.42
USP38-203ENST00000511739 UBE2SQ16763 222 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 EFHC2Q5JST6 749 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 CENPUQ71F23 418 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 SYNE4Q8N205 404 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 TMEM35BQ8NCS4 154 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 HIST1H2AHQ96KK5 128 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 HIST1H2AJQ99878 128 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 H2AFJQ9BTM1 129 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 OSBPL10Q9BXB5 764 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 AAASQ9NRG9 546 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 RNF146Q9NTX7 359 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 EHD2Q9NZN4 543 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 KIAA1468Q9P260 1216 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 SEL1LQ9UBV2 794 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 FEM1BQ9UK73 627 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 EXOC1LA0A1B0GW35 172 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 WDR91A4D1P6 747 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 IGSF3O75054 1194 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 C6orf222P0C671 652 aaPredicted RBP6.15□□□□□ -1.42
USP38-203ENST00000511739 CENPAP49450 140 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 DAB2P98082 770 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 KRT72Q14CN4 511 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 CCDC85BQ15834 202 aaPredicted RBP6.15□□□□□ -1.42
USP38-203ENST00000511739 RBBP7Q16576 425 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 BRINP3Q76B58 766 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 PIP4K2CQ8TBX8 421 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 DESI2Q9BSY9 194 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 KIAA1586Q9HCI6 787 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 EMILIN3Q9NT22 766 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 HEY1Q9Y5J3 304 aa6.15□□□□□ -1.42
USP38-203ENST00000511739 A8MXQ7 604 aa6.15□□□□□ -1.43
USP38-203ENST00000511739 E9PMD0 336 aa6.15□□□□□ -1.43
USP38-203ENST00000511739 NDUFB5O43674 189 aa6.15□□□□□ -1.43
USP38-203ENST00000511739 PLA2G4BP0C869 781 aa6.15□□□□□ -1.43
USP38-203ENST00000511739 KCNA2P16389 499 aa6.15□□□□□ -1.43
USP38-203ENST00000511739 ADORA2BP29275 332 aa6.15□□□□□ -1.43
USP38-203ENST00000511739 SDC4P31431 198 aa6.15□□□□□ -1.43
USP38-203ENST00000511739 COPB1P53618 953 aaKnown RBP6.15□□□□□ -1.43
USP38-203ENST00000511739 FAM83BQ5T0W9 1011 aa6.15□□□□□ -1.43
USP38-203ENST00000511739 B4GALNT2Q8NHY0 566 aa6.15□□□□□ -1.43
USP38-203ENST00000511739 DHTKD1Q96HY7 919 aaPredicted RBP6.15□□□□□ -1.43
USP38-203ENST00000511739 SPATA16Q9BXB7 569 aa6.15□□□□□ -1.43
USP38-203ENST00000511739 ZC4H2Q9NQZ6 224 aa6.15□□□□□ -1.43
USP38-203ENST00000511739 TBK1Q9UHD2 729 aa6.15□□□□□ -1.43
USP38-203ENST00000511739 EPN1Q9Y6I3 576 aaPredicted RBP6.15□□□□□ -1.43
USP38-203ENST00000511739 PNMA6FA0A0J9YX94 578 aa6.15□□□□□ -1.43
USP38-203ENST00000511739 C5orf58C9J3I9 102 aa6.15□□□□□ -1.43
USP38-203ENST00000511739 CYP27B1O15528 508 aa6.15□□□□□ -1.43
USP38-203ENST00000511739 DDHD2O94830 711 aa6.15□□□□□ -1.43
USP38-203ENST00000511739 EPB42P16452 691 aa6.15□□□□□ -1.43
USP38-203ENST00000511739 SMARCA1P28370 1054 aa6.15□□□□□ -1.43
USP38-203ENST00000511739 AARSP49588 968 aaKnown RBP eCLIP6.15□□□□□ -1.43
USP38-203ENST00000511739 LIG3P49916 1009 aa6.15□□□□□ -1.43
USP38-203ENST00000511739 PSMC1P62191 440 aaKnown RBP6.15□□□□□ -1.43
USP38-203ENST00000511739 PPP1R14AQ96A00 147 aa6.15□□□□□ -1.43
USP38-203ENST00000511739 ZNF560Q96MR9 790 aa6.15□□□□□ -1.43
USP38-203ENST00000511739 KIF2CQ99661 725 aa6.15□□□□□ -1.43
USP38-203ENST00000511739 SCOCQ9UIL1 159 aa6.15□□□□□ -1.43
USP38-203ENST00000511739 TPX2Q9ULW0 747 aaKnown RBP6.15□□□□□ -1.43
USP38-203ENST00000511739 TRAF3IP3Q9Y228 551 aa6.15□□□□□ -1.43
USP38-203ENST00000511739 KPNA7A9QM74 516 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 HMGB3O15347 200 aaKnown RBP6.14□□□□□ -1.43
USP38-203ENST00000511739 ZMYND10O75800 440 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 CAPN15O75808 1086 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 KRT37O76014 449 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 TJP3O95049 919 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 GUCA1CO95843 209 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 HSPA1AP0DMV8 641 aaKnown RBP6.14□□□□□ -1.43
USP38-203ENST00000511739 HSPA1BP0DMV9 641 aaKnown RBP6.14□□□□□ -1.43
USP38-203ENST00000511739 OAS2P29728 719 aaKnown RBP6.14□□□□□ -1.43
USP38-203ENST00000511739 GUCA1AP43080 201 aaPredicted RBP6.14□□□□□ -1.43
USP38-203ENST00000511739 CRKP46108 304 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 RASGRF1Q13972 1273 aa6.14□□□□□ -1.43
USP38-203ENST00000511739 TMEM132BQ14DG7 1078 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms