RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 PANK2Q9BZ23 570 aa14.21□□□□□ -0.13
COL6A6-203ENST00000511332 TSPYL2Q9H2G4 693 aaPredicted RBP14.21□□□□□ -0.13
COL6A6-203ENST00000511332 CHST12Q9NRB3 414 aa14.21□□□□□ -0.13
COL6A6-203ENST00000511332 AGPAT5Q9NUQ2 364 aa14.21□□□□□ -0.13
COL6A6-203ENST00000511332 DACT1Q9NYF0 836 aa14.21□□□□□ -0.13
COL6A6-203ENST00000511332 USP25Q9UHP3 1055 aa14.21□□□□□ -0.13
COL6A6-203ENST00000511332 KIAA1671Q9BY89 1806 aa14.2□□□□□ -0.14
COL6A6-203ENST00000511332 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.2□□□□□ -0.14
COL6A6-203ENST00000511332 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.2□□□□□ -0.14
COL6A6-203ENST00000511332 H0YCG3 227 aa14.2□□□□□ -0.14
COL6A6-203ENST00000511332 CSDE1O75534 798 aaKnown RBP14.2□□□□□ -0.14
COL6A6-203ENST00000511332 FAM13AO94988 1023 aa14.2□□□□□ -0.14
COL6A6-203ENST00000511332 PLS3P13797 630 aa14.2□□□□□ -0.14
COL6A6-203ENST00000511332 SCP2P22307 547 aa14.2□□□□□ -0.14
COL6A6-203ENST00000511332 FGFR4P22455 802 aa14.2□□□□□ -0.14
COL6A6-203ENST00000511332 SMTNP53814 917 aa14.2□□□□□ -0.14
COL6A6-203ENST00000511332 PEX3P56589 373 aa14.2□□□□□ -0.14
COL6A6-203ENST00000511332 DEFB103AP81534 67 aa14.2□□□□□ -0.14
COL6A6-203ENST00000511332 SMAD3P84022 425 aaKnown RBP14.2□□□□□ -0.14
COL6A6-203ENST00000511332 AMPD3Q01432 767 aa14.2□□□□□ -0.14
COL6A6-203ENST00000511332 NCBP1Q09161 790 aaKnown RBP14.2□□□□□ -0.14
COL6A6-203ENST00000511332 HABP4Q5JVS0 413 aaKnown RBP14.2□□□□□ -0.14
COL6A6-203ENST00000511332 CEP57L1Q8IYX8 460 aa14.2□□□□□ -0.14
COL6A6-203ENST00000511332 MYOCDQ8IZQ8 938 aa14.2□□□□□ -0.14
COL6A6-203ENST00000511332 FSIP1Q8NA03 581 aa14.2□□□□□ -0.14
COL6A6-203ENST00000511332 ADAM2Q99965 735 aa14.2□□□□□ -0.14
COL6A6-203ENST00000511332 TMX1Q9H3N1 280 aa14.2□□□□□ -0.14
COL6A6-203ENST00000511332 MINDY3Q9H8M7 445 aa14.2□□□□□ -0.14
COL6A6-203ENST00000511332 PARVGQ9HBI0 331 aa14.2□□□□□ -0.14
COL6A6-203ENST00000511332 KMT5AQ9NQR1 393 aa14.2□□□□□ -0.14
COL6A6-203ENST00000511332 RGS18Q9NS28 235 aa14.2□□□□□ -0.14
COL6A6-203ENST00000511332 PRMT7Q9NVM4 692 aaPredicted RBP14.2□□□□□ -0.14
COL6A6-203ENST00000511332 PIN4Q9Y237 131 aaKnown RBP14.2□□□□□ -0.14
COL6A6-203ENST00000511332 NPHP3-ACAD11A0A0J9YXS1 232 aa14.19□□□□□ -0.14
COL6A6-203ENST00000511332 FAM237AA0A1B0GTK4 181 aa14.19□□□□□ -0.14
COL6A6-203ENST00000511332 A0A1B0GVL5 298 aa14.19□□□□□ -0.14
COL6A6-203ENST00000511332 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.19□□□□□ -0.14
COL6A6-203ENST00000511332 CCDC169A6NNP5 214 aa14.19□□□□□ -0.14
COL6A6-203ENST00000511332 AXLP30530 894 aa14.19□□□□□ -0.14
COL6A6-203ENST00000511332 ABCD1P33897 745 aa14.19□□□□□ -0.14
COL6A6-203ENST00000511332 SYKP43405 635 aa14.19□□□□□ -0.14
COL6A6-203ENST00000511332 NPTX2P47972 431 aa14.19□□□□□ -0.14
COL6A6-203ENST00000511332 ZNF131P52739 623 aa14.19□□□□□ -0.14
COL6A6-203ENST00000511332 CACNB1Q02641 598 aaPredicted RBP14.19□□□□□ -0.14
COL6A6-203ENST00000511332 GIT2Q14161 759 aa14.19□□□□□ -0.14
COL6A6-203ENST00000511332 RAB30Q15771 203 aa14.19□□□□□ -0.14
COL6A6-203ENST00000511332 MAPK6Q16659 721 aa14.19□□□□□ -0.14
COL6A6-203ENST00000511332 PPP4R3CPQ6ZMV5 832 aa14.19□□□□□ -0.14
COL6A6-203ENST00000511332 SLC24A5Q71RS6 500 aa14.19□□□□□ -0.14
COL6A6-203ENST00000511332 HERC6Q8IVU3 1022 aa14.19□□□□□ -0.14
COL6A6-203ENST00000511332 SLC17A8Q8NDX2 589 aa14.19□□□□□ -0.14
COL6A6-203ENST00000511332 SPIRE2Q8WWL2 714 aa14.19□□□□□ -0.14
COL6A6-203ENST00000511332 LINC01599Q8WXQ3 324 aa14.19□□□□□ -0.14
COL6A6-203ENST00000511332 DDX12PQ92771 950 aa14.19□□□□□ -0.14
COL6A6-203ENST00000511332 CCDC51Q96ER9 411 aa14.19□□□□□ -0.14
COL6A6-203ENST00000511332 KBTBD4Q9NVX7 518 aa14.19□□□□□ -0.14
COL6A6-203ENST00000511332 HPSEQ9Y251 543 aa14.19□□□□□ -0.14
COL6A6-203ENST00000511332 ADGRA3Q8IWK6 1321 aa14.18□□□□□ -0.14
COL6A6-203ENST00000511332 CNTNAP2Q9UHC6 1331 aa14.18□□□□□ -0.14
COL6A6-203ENST00000511332 TDRD15B5MCY1 1934 aaKnown RBP14.18□□□□□ -0.14
COL6A6-203ENST00000511332 MYMKA6NI61 221 aa14.18□□□□□ -0.14
COL6A6-203ENST00000511332 ENPP3O14638 875 aa14.18□□□□□ -0.14
COL6A6-203ENST00000511332 MGEA5O60502 916 aa14.18□□□□□ -0.14
COL6A6-203ENST00000511332 TSPAN1O60635 241 aa14.18□□□□□ -0.14
COL6A6-203ENST00000511332 PRKCBP05771 671 aa14.18□□□□□ -0.14
COL6A6-203ENST00000511332 SLFN14P0C7P3 912 aa14.18□□□□□ -0.14
COL6A6-203ENST00000511332 STAG3L1P0CL83 205 aa14.18□□□□□ -0.14
COL6A6-203ENST00000511332 SKIP12755 728 aa14.18□□□□□ -0.14
COL6A6-203ENST00000511332 GAP43P17677 238 aa14.18□□□□□ -0.14
COL6A6-203ENST00000511332 SARSP49591 514 aaKnown RBP14.18□□□□□ -0.14
COL6A6-203ENST00000511332 RAB27AP51159 221 aa14.18□□□□□ -0.14
COL6A6-203ENST00000511332 DSC3Q14574 896 aa14.18□□□□□ -0.14
COL6A6-203ENST00000511332 FAM187BQ17R55 369 aa14.18□□□□□ -0.14
COL6A6-203ENST00000511332 TWF2Q6IBS0 349 aaKnown RBP14.18□□□□□ -0.14
COL6A6-203ENST00000511332 NOTUMQ6P988 496 aa14.18□□□□□ -0.14
COL6A6-203ENST00000511332 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.18□□□□□ -0.14
COL6A6-203ENST00000511332 DYMQ7RTS9 669 aa14.18□□□□□ -0.14
COL6A6-203ENST00000511332 NPAS4Q8IUM7 802 aa14.18□□□□□ -0.14
COL6A6-203ENST00000511332 MYCT1Q8N699 235 aa14.18□□□□□ -0.14
COL6A6-203ENST00000511332 TMEM87AQ8NBN3 555 aa14.18□□□□□ -0.14
COL6A6-203ENST00000511332 CCDC34Q96HJ3 373 aa14.18□□□□□ -0.14
COL6A6-203ENST00000511332 ZBED2Q9BTP6 218 aa14.18□□□□□ -0.14
COL6A6-203ENST00000511332 KIFC3Q9BVG8 833 aa14.18□□□□□ -0.14
COL6A6-203ENST00000511332 CCDC113Q9H0I3 377 aa14.18□□□□□ -0.14
COL6A6-203ENST00000511332 ZHX3Q9H4I2 956 aa14.18□□□□□ -0.14
COL6A6-203ENST00000511332 POLD4Q9HCU8 107 aa14.18□□□□□ -0.14
COL6A6-203ENST00000511332 ARHGAP28Q9P2N2 729 aa14.18□□□□□ -0.14
COL6A6-203ENST00000511332 SEL1LQ9UBV2 794 aa14.18□□□□□ -0.14
COL6A6-203ENST00000511332 PCDHA11Q9Y5I1 949 aa14.18□□□□□ -0.14
COL6A6-203ENST00000511332 C9IYK1 514 aa14.17□□□□□ -0.14
COL6A6-203ENST00000511332 K7ENM7 598 aa14.17□□□□□ -0.14
COL6A6-203ENST00000511332 SLC16A4O15374 487 aa14.17□□□□□ -0.14
COL6A6-203ENST00000511332 ACTN4O43707 911 aaKnown RBP14.17□□□□□ -0.14
COL6A6-203ENST00000511332 GJB5O95377 273 aa14.17□□□□□ -0.14
COL6A6-203ENST00000511332 NDUFA8P51970 172 aa14.17□□□□□ -0.14
COL6A6-203ENST00000511332 NCKAP1LP55160 1127 aa14.17□□□□□ -0.14
COL6A6-203ENST00000511332 PRPF4BQ13523 1007 aaKnown RBP14.17□□□□□ -0.14
COL6A6-203ENST00000511332 TMEM132AQ24JP5 1023 aa14.17□□□□□ -0.14
COL6A6-203ENST00000511332 TPRNQ4KMQ1 711 aa14.17□□□□□ -0.14
COL6A6-203ENST00000511332 FAM109BQ6ICB4 259 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms