RNA–Protein interactions for RNA: ENST00000511171.5

LEMD2-209, Transcript of LEM domain containing 2, humanhuman

TSL 2

Gene LEMD2, Length 4,870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-209ENST00000511171 BCL9LQ86UU0 1499 aa13.7□□□□□ -0.22
LEMD2-209ENST00000511171 TARSL2A2RTX5 802 aaKnown RBP13.69□□□□□ -0.22
LEMD2-209ENST00000511171 ICAM1P05362 532 aa13.69□□□□□ -0.22
LEMD2-209ENST00000511171 ZNF564Q8TBZ8 553 aaPredicted RBP13.69□□□□□ -0.22
LEMD2-209ENST00000511171 RUNDC3BQ96NL0 473 aa13.69□□□□□ -0.22
LEMD2-209ENST00000511171 AGPAT1Q99943 283 aa13.69□□□□□ -0.22
LEMD2-209ENST00000511171 NUP85Q9BW27 656 aa13.69□□□□□ -0.22
LEMD2-209ENST00000511171 KIAA1586Q9HCI6 787 aa13.69□□□□□ -0.22
LEMD2-209ENST00000511171 PLAAQ9Y263 795 aa13.69□□□□□ -0.22
LEMD2-209ENST00000511171 SYNGAP1Q96PV0 1343 aa13.69□□□□□ -0.22
LEMD2-209ENST00000511171 COL14A1Q05707 1796 aaKnown RBP13.69□□□□□ -0.22
LEMD2-209ENST00000511171 GRID2IPA4D2P6 1211 aa13.69□□□□□ -0.22
LEMD2-209ENST00000511171 KRT1P04264 644 aa13.69□□□□□ -0.22
LEMD2-209ENST00000511171 IFNAR2P48551 515 aa13.69□□□□□ -0.22
LEMD2-209ENST00000511171 TSNARE1Q96NA8 513 aa13.69□□□□□ -0.22
LEMD2-209ENST00000511171 DNAJC17Q9NVM6 304 aaKnown RBP13.69□□□□□ -0.22
LEMD2-209ENST00000511171 KLRC4O43908 158 aa13.69□□□□□ -0.22
LEMD2-209ENST00000511171 RFX1P22670 979 aa13.69□□□□□ -0.22
LEMD2-209ENST00000511171 STX2P32856 288 aa13.69□□□□□ -0.22
LEMD2-209ENST00000511171 MAPK6Q16659 721 aa13.69□□□□□ -0.22
LEMD2-209ENST00000511171 TMEM119Q4V9L6 283 aa13.69□□□□□ -0.22
LEMD2-209ENST00000511171 CEP57Q86XR8 500 aa13.69□□□□□ -0.22
LEMD2-209ENST00000511171 PNKPQ96T60 521 aa13.69□□□□□ -0.22
LEMD2-209ENST00000511171 AGPAT3Q9NRZ7 376 aa13.69□□□□□ -0.22
LEMD2-209ENST00000511171 RBM12Q9NTZ6 932 aaKnown RBP13.69□□□□□ -0.22
LEMD2-209ENST00000511171 NOVA2Q9UNW9 492 aaKnown RBP13.69□□□□□ -0.22
LEMD2-209ENST00000511171 LRRC10BA6NIK2 292 aa13.69□□□□□ -0.22
LEMD2-209ENST00000511171 NR1D1P20393 614 aa13.69□□□□□ -0.22
LEMD2-209ENST00000511171 DYNLT1P63172 113 aa13.69□□□□□ -0.22
LEMD2-209ENST00000511171 CXCL9Q07325 125 aa13.69□□□□□ -0.22
LEMD2-209ENST00000511171 NAB2Q15742 525 aa13.69□□□□□ -0.22
LEMD2-209ENST00000511171 Q4G0T1 1027 aa13.69□□□□□ -0.22
LEMD2-209ENST00000511171 HHATQ5VTY9 493 aa13.69□□□□□ -0.22
LEMD2-209ENST00000511171 ARMC9Q7Z3E5 817 aa13.69□□□□□ -0.22
LEMD2-209ENST00000511171 GPD1LQ8N335 351 aa13.69□□□□□ -0.22
LEMD2-209ENST00000511171 GLIS3Q8NEA6 775 aa13.69□□□□□ -0.22
LEMD2-209ENST00000511171 GGA3Q9NZ52 723 aa13.69□□□□□ -0.22
LEMD2-209ENST00000511171 NFIBO00712 420 aa13.68□□□□□ -0.22
LEMD2-209ENST00000511171 BUB1BO60566 1050 aaPredicted RBP13.68□□□□□ -0.22
LEMD2-209ENST00000511171 CYP4F22Q6NT55 531 aa13.68□□□□□ -0.22
LEMD2-209ENST00000511171 NLRP7Q8WX94 980 aa13.68□□□□□ -0.22
LEMD2-209ENST00000511171 RNF34Q969K3 372 aa13.68□□□□□ -0.22
LEMD2-209ENST00000511171 TMEM143Q96AN5 459 aa13.68□□□□□ -0.22
LEMD2-209ENST00000511171 AMACRQ9UHK6 382 aa13.68□□□□□ -0.22
LEMD2-209ENST00000511171 FAM169AQ9Y6X4 670 aa13.68□□□□□ -0.22
LEMD2-209ENST00000511171 LRRD1A4D1F6 860 aa13.68□□□□□ -0.22
LEMD2-209ENST00000511171 H2AFXP16104 143 aaPredicted RBP13.68□□□□□ -0.22
LEMD2-209ENST00000511171 MAN1A1P33908 653 aa13.68□□□□□ -0.22
LEMD2-209ENST00000511171 SNRNP35Q16560 246 aaKnown RBP13.68□□□□□ -0.22
LEMD2-209ENST00000511171 SPATA20Q8TB22 786 aa13.68□□□□□ -0.22
LEMD2-209ENST00000511171 KIFC3Q9BVG8 833 aa13.68□□□□□ -0.22
LEMD2-209ENST00000511171 SLC5A4Q9NY91 659 aa13.68□□□□□ -0.22
LEMD2-209ENST00000511171 HACL1Q9UJ83 578 aa13.68□□□□□ -0.22
LEMD2-209ENST00000511171 AGO2Q9UKV8 859 aaKnown RBP13.68□□□□□ -0.22
LEMD2-209ENST00000511171 C5P01031 1676 aa13.68□□□□□ -0.22
LEMD2-209ENST00000511171 CTNND1O60716 968 aaKnown RBP13.68□□□□□ -0.22
LEMD2-209ENST00000511171 AKAP3O75969 853 aa13.68□□□□□ -0.22
LEMD2-209ENST00000511171 NEDD9Q14511 834 aa13.68□□□□□ -0.22
LEMD2-209ENST00000511171 FAM47CQ5HY64 1035 aa13.68□□□□□ -0.22
LEMD2-209ENST00000511171 ZKSCAN4Q969J2 545 aaPredicted RBP13.68□□□□□ -0.22
LEMD2-209ENST00000511171 MKNK1Q9BUB5 465 aa13.68□□□□□ -0.22
LEMD2-209ENST00000511171 HEMGNQ9BXL5 484 aa13.68□□□□□ -0.22
LEMD2-209ENST00000511171 RBAKQ9NYW8 714 aaPredicted RBP13.68□□□□□ -0.22
LEMD2-209ENST00000511171 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.68□□□□□ -0.22
LEMD2-209ENST00000511171 PHRF1Q9P1Y6 1649 aaKnown RBP13.68□□□□□ -0.22
LEMD2-209ENST00000511171 SGK1O00141 431 aa13.68□□□□□ -0.22
LEMD2-209ENST00000511171 DGAT1O75907 488 aa13.68□□□□□ -0.22
LEMD2-209ENST00000511171 TFRCP02786 760 aaKnown RBP13.68□□□□□ -0.22
LEMD2-209ENST00000511171 ADCY1Q08828 1119 aa13.68□□□□□ -0.22
LEMD2-209ENST00000511171 TRAPPC11Q7Z392 1133 aa13.68□□□□□ -0.22
LEMD2-209ENST00000511171 CTAGE3PQ8IX95 158 aa13.68□□□□□ -0.22
LEMD2-209ENST00000511171 CCDC13Q8IYE1 715 aa13.68□□□□□ -0.22
LEMD2-209ENST00000511171 CACNA2D3Q8IZS8 1091 aa13.68□□□□□ -0.22
LEMD2-209ENST00000511171 PSPC1Q8WXF1 523 aaKnown RBP13.68□□□□□ -0.22
LEMD2-209ENST00000511171 A0A0U1RQJ8 604 aa13.67□□□□□ -0.22
LEMD2-209ENST00000511171 EXOC8Q8IYI6 725 aa13.67□□□□□ -0.22
LEMD2-209ENST00000511171 RNF169Q8NCN4 708 aa13.67□□□□□ -0.22
LEMD2-209ENST00000511171 SLC35G2Q8TBE7 412 aa13.67□□□□□ -0.22
LEMD2-209ENST00000511171 FBF1Q8TES7 1133 aa13.67□□□□□ -0.22
LEMD2-209ENST00000511171 RPF1Q9H9Y2 349 aaKnown RBP13.67□□□□□ -0.22
LEMD2-209ENST00000511171 GPRC5CQ9NQ84 441 aa13.67□□□□□ -0.22
LEMD2-209ENST00000511171 PON1P27169 355 aa13.67□□□□□ -0.22
LEMD2-209ENST00000511171 SSTR3P32745 418 aaPredicted RBP13.67□□□□□ -0.22
LEMD2-209ENST00000511171 HNRNPH2P55795 449 aaKnown RBP13.67□□□□□ -0.22
LEMD2-209ENST00000511171 PDCLQ13371 301 aa13.67□□□□□ -0.22
LEMD2-209ENST00000511171 TKFCQ3LXA3 575 aa13.67□□□□□ -0.22
LEMD2-209ENST00000511171 PALM2Q8IXS6 379 aa13.67□□□□□ -0.22
LEMD2-209ENST00000511171 C4orf32Q8N8J7 132 aa13.67□□□□□ -0.22
LEMD2-209ENST00000511171 PROCA1Q8NCQ7 364 aaPredicted RBP13.67□□□□□ -0.22
LEMD2-209ENST00000511171 SYN2Q92777 582 aaPredicted RBP13.67□□□□□ -0.22
LEMD2-209ENST00000511171 HAS1Q92839 578 aa13.67□□□□□ -0.22
LEMD2-209ENST00000511171 ANAPC5Q9UJX4 755 aa13.67□□□□□ -0.22
LEMD2-209ENST00000511171 M0QZ92 97 aa13.67□□□□□ -0.22
LEMD2-209ENST00000511171 ACOT2P49753 483 aa13.67□□□□□ -0.22
LEMD2-209ENST00000511171 LIG3P49916 1009 aa13.67□□□□□ -0.22
LEMD2-209ENST00000511171 BSPRYQ5W0U4 402 aa13.67□□□□□ -0.22
LEMD2-209ENST00000511171 CASC4Q6P4E1 433 aa13.67□□□□□ -0.22
LEMD2-209ENST00000511171 SPATS2Q86XZ4 545 aaKnown RBP13.67□□□□□ -0.22
LEMD2-209ENST00000511171 BBOF1Q8ND07 529 aa13.67□□□□□ -0.22
LEMD2-209ENST00000511171 FAM167AQ96KS9 214 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms