RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 KBTBD13C9JR72 458 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 TGFB1I1O43294 461 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 MYL1P05976 194 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 CCNE1P24864 410 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 TMOD1P28289 359 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 MRE11P49959 708 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 CDR1P51861 262 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 EHHADHQ08426 723 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 PTGISQ16647 500 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 ZBTB41Q5SVQ8 909 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 THNSL1Q8IYQ7 743 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 POMGNT1Q8WZA1 660 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 KIFAP3Q92845 792 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 ZNF830Q96NB3 372 aaPredicted RBP8.85□□□□□ -0.99
SMAD1-209ENST00000511125 TBX20Q9UMR3 447 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 A0A1W2PQ45 241 aaPredicted RBP8.85□□□□□ -0.99
SMAD1-209ENST00000511125 A0A1W2PQY0 241 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 SMTNL1A8MU46 457 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 TEX33O43247 280 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 ZEB2O60315 1214 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 EXOC3O60645 756 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 GAP43P17677 238 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 ARL2P36404 184 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 LIG4P49917 911 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 FANCCQ00597 558 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 APBA1Q02410 837 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 ZNF484Q5JVG2 852 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 TTI2Q6NXR4 508 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 TAS1R3Q7RTX0 852 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 CEP120Q8N960 986 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 RNF169Q8NCN4 708 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 U2AF1L4Q8WU68 220 aaKnown RBP8.85□□□□□ -0.99
SMAD1-209ENST00000511125 PCMTD1Q96MG8 357 aaPredicted RBP8.85□□□□□ -0.99
SMAD1-209ENST00000511125 POP1Q99575 1024 aaKnown RBP8.85□□□□□ -0.99
SMAD1-209ENST00000511125 XPO4Q9C0E2 1151 aaKnown RBP8.85□□□□□ -0.99
SMAD1-209ENST00000511125 HES2Q9Y543 173 aa8.85□□□□□ -0.99
SMAD1-209ENST00000511125 FRMD3A2A2Y4 597 aa8.84□□□□□ -0.99
SMAD1-209ENST00000511125 KCNJ18B7U540 433 aa8.84□□□□□ -0.99
SMAD1-209ENST00000511125 GNRH1P01148 92 aa8.84□□□□□ -0.99
SMAD1-209ENST00000511125 MUTP22033 750 aa8.84□□□□□ -0.99
SMAD1-209ENST00000511125 SLC26A2P50443 739 aa8.84□□□□□ -0.99
SMAD1-209ENST00000511125 UBASH3AP57075 661 aa8.84□□□□□ -0.99
SMAD1-209ENST00000511125 STRN3Q13033 797 aa8.84□□□□□ -0.99
SMAD1-209ENST00000511125 KCNJ12Q14500 433 aa8.84□□□□□ -0.99
SMAD1-209ENST00000511125 SPATA1Q5VX52 437 aa8.84□□□□□ -0.99
SMAD1-209ENST00000511125 ARMCX5Q6P1M9 558 aa8.84□□□□□ -0.99
SMAD1-209ENST00000511125 ELOA2Q8IYF1 753 aaPredicted RBP8.84□□□□□ -0.99
SMAD1-209ENST00000511125 GUF1Q8N442 669 aaKnown RBP8.84□□□□□ -0.99
SMAD1-209ENST00000511125 TMEM40Q8WWA1 233 aa8.84□□□□□ -0.99
SMAD1-209ENST00000511125 TSG101Q99816 390 aa8.84□□□□□ -0.99
SMAD1-209ENST00000511125 PPP1R12CQ9BZL4 782 aa8.84□□□□□ -0.99
SMAD1-209ENST00000511125 GBP3Q9H0R5 595 aa8.84□□□□□ -0.99
SMAD1-209ENST00000511125 NRBP1Q9UHY1 535 aa8.84□□□□□ -0.99
SMAD1-209ENST00000511125 RWDD2AQ9UIY3 292 aa8.84□□□□□ -0.99
SMAD1-209ENST00000511125 NR3C1P04150 777 aa8.84□□□□□ -0.99
SMAD1-209ENST00000511125 TRIM49P0CI25 452 aa8.84□□□□□ -0.99
SMAD1-209ENST00000511125 TRIM49CP0CI26 452 aa8.84□□□□□ -0.99
SMAD1-209ENST00000511125 RFC5P40937 340 aa8.84□□□□□ -0.99
SMAD1-209ENST00000511125 ZNF131P52739 623 aa8.84□□□□□ -0.99
SMAD1-209ENST00000511125 PSMD2Q13200 908 aa8.84□□□□□ -0.99
SMAD1-209ENST00000511125 IER5Q5VY09 327 aa8.84□□□□□ -0.99
SMAD1-209ENST00000511125 ANP32BQ92688 251 aaKnown RBP8.84□□□□□ -0.99
SMAD1-209ENST00000511125 FAM213AQ9BRX8 229 aa8.84□□□□□ -0.99
SMAD1-209ENST00000511125 KCTD10Q9H3F6 313 aa8.84□□□□□ -0.99
SMAD1-209ENST00000511125 MAGEC2Q9UBF1 373 aaPredicted RBP8.84□□□□□ -0.99
SMAD1-209ENST00000511125 CEP290O15078 2479 aa8.84□□□□□ -0.99
SMAD1-209ENST00000511125 MYH11P35749 1972 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 WDR81Q562E7 1941 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 NRCAMQ92823 1304 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 N4BP3O15049 544 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 DLATP10515 647 aaKnown RBP8.83□□□□□ -1
SMAD1-209ENST00000511125 KLK7P49862 253 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 TPM4P67936 248 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 EEF1DP3Q658K8 133 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 HS2ST1Q7LGA3 356 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 IRF2BP1Q8IU81 584 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 PCSK9Q8NBP7 692 aaKnown RBP8.83□□□□□ -1
SMAD1-209ENST00000511125 KLHDC9Q8NEP7 349 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 ENOX1Q8TC92 643 aaKnown RBP8.83□□□□□ -1
SMAD1-209ENST00000511125 DHTKD1Q96HY7 919 aaPredicted RBP8.83□□□□□ -1
SMAD1-209ENST00000511125 PAWRQ96IZ0 340 aaKnown RBP8.83□□□□□ -1
SMAD1-209ENST00000511125 CNOT6LQ96LI5 555 aaKnown RBP8.83□□□□□ -1
SMAD1-209ENST00000511125 ACCSQ96QU6 501 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 ATP11BQ9Y2G3 1177 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 AKAP3O75969 853 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 PRKCBP05771 671 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 PTMAP06454 111 aaKnown RBP8.83□□□□□ -1
SMAD1-209ENST00000511125 GHRP10912 638 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 CCL23P55773 120 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 CENPPQ6IPU0 288 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 CBWD2Q8IUF1 395 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 ARRDC4Q8NCT1 418 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 MCOLN1Q9GZU1 580 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 IFT122Q9HBG6 1241 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 PRDM5Q9NQX1 630 aaPredicted RBP8.83□□□□□ -1
SMAD1-209ENST00000511125 OLFML3Q9NRN5 406 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 AGPAT3Q9NRZ7 376 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 KCND2Q9NZV8 630 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 B4GALT4O60513 344 aa8.83□□□□□ -1
SMAD1-209ENST00000511125 LRRN2O75325 713 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms