RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, human

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-223	ENST00000511081	PTEN	P60484	403 aa		13.53	□□□□□ -0.24
CLDND1-223	ENST00000511081	ADAM15	Q13444	863 aa		13.53	□□□□□ -0.24
CLDND1-223	ENST00000511081	PDIA5	Q14554	519 aa		13.53	□□□□□ -0.24
CLDND1-223	ENST00000511081	MXD4	Q14582	209 aa	Predicted RBP	13.53	□□□□□ -0.24
CLDND1-223	ENST00000511081	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
CLDND1-223	ENST00000511081	ZNF174	Q15697	407 aa		13.53	□□□□□ -0.24
CLDND1-223	ENST00000511081	PUS10	Q3MIT2	529 aa	Known RBP	13.53	□□□□□ -0.24
CLDND1-223	ENST00000511081	COLGALT1	Q8NBJ5	622 aa		13.53	□□□□□ -0.24
CLDND1-223	ENST00000511081	POF1B	Q8WVV4	589 aa		13.53	□□□□□ -0.24
CLDND1-223	ENST00000511081	TMX3	Q96JJ7	454 aa		13.53	□□□□□ -0.24
CLDND1-223	ENST00000511081	TBC1D32	Q96NH3	1257 aa		13.53	□□□□□ -0.24
CLDND1-223	ENST00000511081	AGPAT5	Q9NUQ2	364 aa		13.53	□□□□□ -0.24
CLDND1-223	ENST00000511081	HCST	Q9UBK5	93 aa		13.53	□□□□□ -0.24
CLDND1-223	ENST00000511081	DBR1	Q9UK59	544 aa	Known RBP	13.53	□□□□□ -0.24
CLDND1-223	ENST00000511081	LZTS1	Q9Y250	596 aa		13.53	□□□□□ -0.24
CLDND1-223	ENST00000511081	TRIO	O75962	3097 aa		13.53	□□□□□ -0.24
CLDND1-223	ENST00000511081	POTEM	A6NI47	508 aa		13.52	□□□□□ -0.25
CLDND1-223	ENST00000511081	MED24	O75448	989 aa		13.52	□□□□□ -0.25
CLDND1-223	ENST00000511081	FGF18	O76093	207 aa		13.52	□□□□□ -0.25
CLDND1-223	ENST00000511081	CD2BP2	O95400	341 aa	Known RBP	13.52	□□□□□ -0.25
CLDND1-223	ENST00000511081	OR52Z1	P0C646	297 aa		13.52	□□□□□ -0.25
CLDND1-223	ENST00000511081	SRGAP2C	P0DJJ0	459 aa		13.52	□□□□□ -0.25
CLDND1-223	ENST00000511081	LAG3	P18627	525 aa		13.52	□□□□□ -0.25
CLDND1-223	ENST00000511081	KCNA5	P22460	613 aa		13.52	□□□□□ -0.25
CLDND1-223	ENST00000511081	IRS1	P35568	1242 aa		13.52	□□□□□ -0.25
CLDND1-223	ENST00000511081	TEC	P42680	631 aa		13.52	□□□□□ -0.25
CLDND1-223	ENST00000511081	MCM2	P49736	904 aa		13.52	□□□□□ -0.25
CLDND1-223	ENST00000511081	TTC38	Q5R3I4	469 aa		13.52	□□□□□ -0.25
CLDND1-223	ENST00000511081	PDE12	Q6L8Q7	609 aa	Known RBP	13.52	□□□□□ -0.25
CLDND1-223	ENST00000511081	KCNT2	Q6UVM3	1135 aa		13.52	□□□□□ -0.25
CLDND1-223	ENST00000511081	CATSPER4	Q7RTX7	472 aa		13.52	□□□□□ -0.25
CLDND1-223	ENST00000511081	PIGO	Q8TEQ8	1089 aa		13.52	□□□□□ -0.25
CLDND1-223	ENST00000511081	NLRP4	Q96MN2	994 aa		13.52	□□□□□ -0.25
CLDND1-223	ENST00000511081	NECAB3	Q96P71	396 aa	Predicted RBP	13.52	□□□□□ -0.25
CLDND1-223	ENST00000511081	NACC1	Q96RE7	527 aa		13.52	□□□□□ -0.25
CLDND1-223	ENST00000511081	MTR	Q99707	1265 aa		13.52	□□□□□ -0.25
CLDND1-223	ENST00000511081	NFKBIZ	Q9BYH8	718 aa		13.52	□□□□□ -0.25
CLDND1-223	ENST00000511081	FAM105A	Q9NUU6	356 aa		13.52	□□□□□ -0.25
CLDND1-223	ENST00000511081	RAB27A	P51159	221 aa		13.51	□□□□□ -0.25
CLDND1-223	ENST00000511081	ERVFC1	P60507	584 aa		13.51	□□□□□ -0.25
CLDND1-223	ENST00000511081	UBXN11	Q5T124	520 aa		13.51	□□□□□ -0.25
CLDND1-223	ENST00000511081	FAM178B	Q8IXR5	827 aa		13.51	□□□□□ -0.25
CLDND1-223	ENST00000511081	LRRC43	Q8N309	656 aa		13.51	□□□□□ -0.25
CLDND1-223	ENST00000511081	RNF149	Q8NC42	400 aa		13.51	□□□□□ -0.25
CLDND1-223	ENST00000511081	UPF2	Q9HAU5	1272 aa	Known RBP	13.51	□□□□□ -0.25
CLDND1-223	ENST00000511081	PIN4	Q9Y237	131 aa	Known RBP	13.51	□□□□□ -0.25
CLDND1-223	ENST00000511081	KIF3A	Q9Y496	699 aa		13.51	□□□□□ -0.25
CLDND1-223	ENST00000511081		A0A087WWV3	80 aa		13.5	□□□□□ -0.25
CLDND1-223	ENST00000511081	SPDYE4	A6NLX3	237 aa		13.5	□□□□□ -0.25
CLDND1-223	ENST00000511081	FSCN2	O14926	492 aa		13.5	□□□□□ -0.25
CLDND1-223	ENST00000511081	OFD1	O75665	1012 aa		13.5	□□□□□ -0.25
CLDND1-223	ENST00000511081	IBSP	P21815	317 aa	Predicted RBP	13.5	□□□□□ -0.25
CLDND1-223	ENST00000511081	GLRA2	P23416	452 aa		13.5	□□□□□ -0.25
CLDND1-223	ENST00000511081	AXL	P30530	894 aa		13.5	□□□□□ -0.25
CLDND1-223	ENST00000511081	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
CLDND1-223	ENST00000511081	DLX2	Q07687	328 aa	Predicted RBP	13.5	□□□□□ -0.25
CLDND1-223	ENST00000511081	AMHR2	Q16671	573 aa		13.5	□□□□□ -0.25
CLDND1-223	ENST00000511081	SPOUT1	Q5T280	376 aa	Known RBP	13.5	□□□□□ -0.25
CLDND1-223	ENST00000511081	TWF2	Q6IBS0	349 aa	Known RBP	13.5	□□□□□ -0.25
CLDND1-223	ENST00000511081	PTCRA	Q6ISU1	281 aa	Predicted RBP	13.5	□□□□□ -0.25
CLDND1-223	ENST00000511081	AGMO	Q6ZNB7	445 aa		13.5	□□□□□ -0.25
CLDND1-223	ENST00000511081	ADGRD2	Q7Z7M1	963 aa		13.5	□□□□□ -0.25
CLDND1-223	ENST00000511081	ABI1	Q8IZP0	508 aa		13.5	□□□□□ -0.25
CLDND1-223	ENST00000511081	EFHB	Q8N7U6	833 aa		13.5	□□□□□ -0.25
CLDND1-223	ENST00000511081	IGSF22	Q8N9C0	903 aa		13.5	□□□□□ -0.25
CLDND1-223	ENST00000511081	HELQ	Q8TDG4	1101 aa		13.5	□□□□□ -0.25
CLDND1-223	ENST00000511081	MRPS27	Q92552	414 aa	Known RBP	13.5	□□□□□ -0.25
CLDND1-223	ENST00000511081	ZNF558	Q96NG5	402 aa		13.5	□□□□□ -0.25
CLDND1-223	ENST00000511081	SPG21	Q9NZD8	308 aa		13.5	□□□□□ -0.25
CLDND1-223	ENST00000511081	NOL7	Q9UMY1	257 aa	Known RBP	13.5	□□□□□ -0.25
CLDND1-223	ENST00000511081	PCDHB2	Q9Y5E7	798 aa		13.5	□□□□□ -0.25
CLDND1-223	ENST00000511081	CARNS1	A5YM72	827 aa		13.49	□□□□□ -0.25
CLDND1-223	ENST00000511081	MEIS3P2	A8K0S8	358 aa		13.49	□□□□□ -0.25
CLDND1-223	ENST00000511081		H3BQ06	376 aa	Predicted RBP	13.49	□□□□□ -0.25
CLDND1-223	ENST00000511081	EYA4	O95677	639 aa		13.49	□□□□□ -0.25
CLDND1-223	ENST00000511081	PPM1A	P35813	382 aa		13.49	□□□□□ -0.25
CLDND1-223	ENST00000511081	PTGDR	Q13258	359 aa		13.49	□□□□□ -0.25
CLDND1-223	ENST00000511081	CAPS	Q13938	189 aa		13.49	□□□□□ -0.25
CLDND1-223	ENST00000511081	KCNC3	Q14003	757 aa		13.49	□□□□□ -0.25
CLDND1-223	ENST00000511081	TFDP1	Q14186	410 aa		13.49	□□□□□ -0.25
CLDND1-223	ENST00000511081	THNSL1	Q8IYQ7	743 aa		13.49	□□□□□ -0.25
CLDND1-223	ENST00000511081	SLC39A11	Q8N1S5	342 aa		13.49	□□□□□ -0.25
CLDND1-223	ENST00000511081	RNF169	Q8NCN4	708 aa		13.49	□□□□□ -0.25
CLDND1-223	ENST00000511081	ASAP3	Q8TDY4	903 aa		13.49	□□□□□ -0.25
CLDND1-223	ENST00000511081	PPP2R3C	Q969Q6	453 aa		13.49	□□□□□ -0.25
CLDND1-223	ENST00000511081	PGBD4	Q96DM1	585 aa		13.49	□□□□□ -0.25
CLDND1-223	ENST00000511081	MSLNL	Q96KJ4	702 aa		13.49	□□□□□ -0.25
CLDND1-223	ENST00000511081	MRPL9	Q9BYD2	267 aa	Known RBP	13.49	□□□□□ -0.25
CLDND1-223	ENST00000511081	CD320	Q9NPF0	282 aa		13.49	□□□□□ -0.25
CLDND1-223	ENST00000511081	TLR9	Q9NR96	1032 aa		13.49	□□□□□ -0.25
CLDND1-223	ENST00000511081	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.49	□□□□□ -0.25
CLDND1-223	ENST00000511081	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.49	□□□□□ -0.25
CLDND1-223	ENST00000511081	CLDND1	Q9NY35	253 aa		13.49	□□□□□ -0.25
CLDND1-223	ENST00000511081	PUF60	Q9UHX1	559 aa	Known RBP	13.49	□□□□□ -0.25
CLDND1-223	ENST00000511081	PCDHB6	Q9Y5E3	794 aa		13.49	□□□□□ -0.25
CLDND1-223	ENST00000511081	LAD1	O00515	517 aa		13.48	□□□□□ -0.25
CLDND1-223	ENST00000511081	INPPL1	O15357	1258 aa		13.48	□□□□□ -0.25
CLDND1-223	ENST00000511081	LINC01565	O15544	149 aa		13.48	□□□□□ -0.25
CLDND1-223	ENST00000511081	TSPAN1	O60635	241 aa		13.48	□□□□□ -0.25
CLDND1-223	ENST00000511081	IL9	P15248	144 aa		13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms