RNA–Protein interactions for RNA: ENST00000509564.1

SDHA-211, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 630 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-211ENST00000509564 RARRES1P49788 294 aa13.4□□□□□ -0.26
SDHA-211ENST00000509564 FAM189BP81408 668 aa13.4□□□□□ -0.26
SDHA-211ENST00000509564 MXD4Q14582 209 aaPredicted RBP13.4□□□□□ -0.26
SDHA-211ENST00000509564 POTEGQ6S5H5 508 aa13.4□□□□□ -0.26
SDHA-211ENST00000509564 GLB1LQ6UWU2 654 aa13.4□□□□□ -0.26
SDHA-211ENST00000509564 ZNF598Q86UK7 904 aaKnown RBP13.4□□□□□ -0.26
SDHA-211ENST00000509564 SPPL3Q8TCT6 385 aa13.4□□□□□ -0.26
SDHA-211ENST00000509564 CASD1Q96PB1 797 aa13.4□□□□□ -0.26
SDHA-211ENST00000509564 TRAIPQ9BWF2 469 aa13.4□□□□□ -0.26
SDHA-211ENST00000509564 POLR3FQ9H1D9 316 aaPredicted RBP13.4□□□□□ -0.26
SDHA-211ENST00000509564 XPNPEP1Q9NQW7 623 aa13.4□□□□□ -0.26
SDHA-211ENST00000509564 VWA8A3KMH1 1905 aa13.4□□□□□ -0.26
SDHA-211ENST00000509564 KMT2EQ8IZD2 1858 aa13.4□□□□□ -0.26
SDHA-211ENST00000509564 CNTNAP2Q9UHC6 1331 aa13.39□□□□□ -0.27
SDHA-211ENST00000509564 MUC3AQ02505 3323 aa13.39□□□□□ -0.27
SDHA-211ENST00000509564 ASAP2O43150 1006 aa13.39□□□□□ -0.27
SDHA-211ENST00000509564 ZC3H11AO75152 810 aaKnown RBP eCLIP13.39□□□□□ -0.275e-7■□□□□ 11.2
SDHA-211ENST00000509564 SRGAP2CP0DJJ0 459 aa13.39□□□□□ -0.27
SDHA-211ENST00000509564 PBX3P40426 434 aa13.39□□□□□ -0.27
SDHA-211ENST00000509564 CAPSQ13938 189 aa13.39□□□□□ -0.27
SDHA-211ENST00000509564 CAMK1Q14012 370 aa13.39□□□□□ -0.27
SDHA-211ENST00000509564 PCBP1Q15365 356 aaKnown RBP eCLIP13.39□□□□□ -0.27
SDHA-211ENST00000509564 PLPP4Q5VZY2 271 aa13.39□□□□□ -0.27
SDHA-211ENST00000509564 KCNT2Q6UVM3 1135 aa13.39□□□□□ -0.27
SDHA-211ENST00000509564 URGCPQ8TCY9 931 aa13.39□□□□□ -0.27
SDHA-211ENST00000509564 PRPF31Q8WWY3 499 aaKnown RBP13.39□□□□□ -0.27
SDHA-211ENST00000509564 PGBD4Q96DM1 585 aa13.39□□□□□ -0.27
SDHA-211ENST00000509564 HSD17B14Q9BPX1 270 aa13.39□□□□□ -0.27
SDHA-211ENST00000509564 RAB34Q9BZG1 259 aa13.39□□□□□ -0.27
SDHA-211ENST00000509564 LZTS1Q9Y250 596 aa13.39□□□□□ -0.27
SDHA-211ENST00000509564 INPP5FQ9Y2H2 1132 aa13.39□□□□□ -0.27
SDHA-211ENST00000509564 ANK1P16157 1881 aa13.39□□□□□ -0.27
SDHA-211ENST00000509564 CARNS1A5YM72 827 aa13.38□□□□□ -0.27
SDHA-211ENST00000509564 INO80B-WBP1J3KQ70 363 aa13.38□□□□□ -0.27
SDHA-211ENST00000509564 ZBTB39O15060 712 aa13.38□□□□□ -0.27
SDHA-211ENST00000509564 GTF2F1P35269 517 aaKnown RBP eCLIP13.38□□□□□ -0.27
SDHA-211ENST00000509564 TECP42680 631 aa13.38□□□□□ -0.27
SDHA-211ENST00000509564 NRIP1P48552 1158 aa13.38□□□□□ -0.27
SDHA-211ENST00000509564 MCM2P49736 904 aa13.38□□□□□ -0.27
SDHA-211ENST00000509564 RNASELQ05823 741 aaKnown RBP13.38□□□□□ -0.27
SDHA-211ENST00000509564 SMAD4Q13485 552 aaKnown RBP13.38□□□□□ -0.27
SDHA-211ENST00000509564 NBR1Q14596 966 aa13.38□□□□□ -0.27
SDHA-211ENST00000509564 ZNF174Q15697 407 aa13.38□□□□□ -0.27
SDHA-211ENST00000509564 CLUL1Q15846 466 aa13.38□□□□□ -0.27
SDHA-211ENST00000509564 PDE12Q6L8Q7 609 aaKnown RBP13.38□□□□□ -0.27
SDHA-211ENST00000509564 NOTUMQ6P988 496 aa13.38□□□□□ -0.27
SDHA-211ENST00000509564 MCPH1Q8NEM0 835 aa13.38□□□□□ -0.27
SDHA-211ENST00000509564 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.38□□□□□ -0.27
SDHA-211ENST00000509564 PIGOQ8TEQ8 1089 aa13.38□□□□□ -0.27
SDHA-211ENST00000509564 MRPS27Q92552 414 aaKnown RBP13.38□□□□□ -0.27
SDHA-211ENST00000509564 LPPQ93052 612 aa13.38□□□□□ -0.27
SDHA-211ENST00000509564 CCDC51Q96ER9 411 aa13.38□□□□□ -0.27
SDHA-211ENST00000509564 TBC1D32Q96NH3 1257 aa13.38□□□□□ -0.27
SDHA-211ENST00000509564 TCF25Q9BQ70 676 aa13.38□□□□□ -0.27
SDHA-211ENST00000509564 IGFLR1Q9H665 355 aa13.38□□□□□ -0.27
SDHA-211ENST00000509564 MINDY3Q9H8M7 445 aa13.38□□□□□ -0.27
SDHA-211ENST00000509564 PCDHGC5Q9Y5F6 944 aa13.38□□□□□ -0.27
SDHA-211ENST00000509564 TCHHQ07283 1943 aa13.38□□□□□ -0.27
SDHA-211ENST00000509564 TSC2P49815 1807 aa13.37□□□□□ -0.27
SDHA-211ENST00000509564 ARHGEF35A5YM69 484 aa13.37□□□□□ -0.27
SDHA-211ENST00000509564 LRRIQ4A6NIV6 560 aa13.37□□□□□ -0.27
SDHA-211ENST00000509564 LINC01565O15544 149 aa13.37□□□□□ -0.27
SDHA-211ENST00000509564 TSPAN1O60635 241 aa13.37□□□□□ -0.27
SDHA-211ENST00000509564 MED24O75448 989 aa13.37□□□□□ -0.27
SDHA-211ENST00000509564 U2AF2P26368 475 aaKnown RBP eCLIP13.37□□□□□ -0.27
SDHA-211ENST00000509564 SSTR3P32745 418 aaPredicted RBP13.37□□□□□ -0.27
SDHA-211ENST00000509564 CA8P35219 290 aa13.37□□□□□ -0.27
SDHA-211ENST00000509564 FXR2P51116 673 aaKnown RBP eCLIP13.37□□□□□ -0.271e-6■■■□□ 16.6
SDHA-211ENST00000509564 PLCB3Q01970 1234 aa13.37□□□□□ -0.27
SDHA-211ENST00000509564 KRT17Q04695 432 aa13.37□□□□□ -0.27
SDHA-211ENST00000509564 MBTD1Q05BQ5 628 aa13.37□□□□□ -0.27
SDHA-211ENST00000509564 CTC1Q2NKJ3 1217 aa13.37□□□□□ -0.27
SDHA-211ENST00000509564 LONRF3Q496Y0 759 aa13.37□□□□□ -0.27
SDHA-211ENST00000509564 MCTP1Q6DN14 999 aa13.37□□□□□ -0.27
SDHA-211ENST00000509564 LRRC55Q6ZSA7 311 aa13.37□□□□□ -0.27
SDHA-211ENST00000509564 ZBTB8OSQ8IWT0 167 aa13.37□□□□□ -0.27
SDHA-211ENST00000509564 SLC39A11Q8N1S5 342 aa13.37□□□□□ -0.27
SDHA-211ENST00000509564 EFHBQ8N7U6 833 aa13.37□□□□□ -0.27
SDHA-211ENST00000509564 ASAP3Q8TDY4 903 aa13.37□□□□□ -0.27
SDHA-211ENST00000509564 MICAL1Q8TDZ2 1067 aa13.37□□□□□ -0.27
SDHA-211ENST00000509564 TMEM169Q96HH4 297 aa13.37□□□□□ -0.27
SDHA-211ENST00000509564 TMX3Q96JJ7 454 aa13.37□□□□□ -0.27
SDHA-211ENST00000509564 POLR3CQ9BUI4 534 aaPredicted RBP13.37□□□□□ -0.27
SDHA-211ENST00000509564 TRIM6Q9C030 488 aaPredicted RBP13.37□□□□□ -0.27
SDHA-211ENST00000509564 RSAD1Q9HA92 442 aa13.37□□□□□ -0.27
SDHA-211ENST00000509564 TBC1D13Q9NVG8 400 aa13.37□□□□□ -0.27
SDHA-211ENST00000509564 SPG21Q9NZD8 308 aa13.37□□□□□ -0.27
SDHA-211ENST00000509564 PUF60Q9UHX1 559 aaKnown RBP13.37□□□□□ -0.27
SDHA-211ENST00000509564 CD207Q9UJ71 328 aa13.37□□□□□ -0.27
SDHA-211ENST00000509564 DBR1Q9UK59 544 aaKnown RBP13.37□□□□□ -0.27
SDHA-211ENST00000509564 PCDHB2Q9Y5E7 798 aa13.37□□□□□ -0.27
SDHA-211ENST00000509564 ZMYM2Q9UBW7 1377 aa13.36□□□□□ -0.27
SDHA-211ENST00000509564 GRXCR2A6NFK2 248 aa13.36□□□□□ -0.27
SDHA-211ENST00000509564 H3BQV1 296 aa13.36□□□□□ -0.27
SDHA-211ENST00000509564 LAD1O00515 517 aa13.36□□□□□ -0.27
SDHA-211ENST00000509564 FSCN2O14926 492 aa13.36□□□□□ -0.27
SDHA-211ENST00000509564 CD2BP2O95400 341 aaKnown RBP13.36□□□□□ -0.27
SDHA-211ENST00000509564 SPATA31C1P0DKV0 1188 aa13.36□□□□□ -0.27
SDHA-211ENST00000509564 GLRA2P23416 452 aa13.36□□□□□ -0.27
SDHA-211ENST00000509564 RPA1P27694 616 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms