RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 DLATP10515 647 aaKnown RBP16.21■□□□□ 0.19
PHF3-209ENST00000509330 HARSP12081 509 aaKnown RBP16.21■□□□□ 0.19
PHF3-209ENST00000509330 NCKAP1LP55160 1127 aa16.21■□□□□ 0.19
PHF3-209ENST00000509330 SLC18A3Q16572 532 aa16.21■□□□□ 0.19
PHF3-209ENST00000509330 MAP7D2Q96T17 732 aa16.21■□□□□ 0.19
PHF3-209ENST00000509330 PARD6BQ9BYG5 372 aa16.21■□□□□ 0.19
PHF3-209ENST00000509330 PORCNQ9H237 461 aa16.21■□□□□ 0.19
PHF3-209ENST00000509330 AIPL1Q9NZN9 384 aa16.21■□□□□ 0.19
PHF3-209ENST00000509330 AGTPBP1Q9UPW5 1226 aa16.21■□□□□ 0.19
PHF3-209ENST00000509330 CTAGE15A4D2H0 777 aa16.2■□□□□ 0.18
PHF3-209ENST00000509330 LRRIQ4A6NIV6 560 aa16.2■□□□□ 0.18
PHF3-209ENST00000509330 TACC1O75410 805 aa16.2■□□□□ 0.18
PHF3-209ENST00000509330 CTAGE8P0CG41 777 aa16.2■□□□□ 0.18
PHF3-209ENST00000509330 MATR3P43243 847 aaKnown RBP eCLIP16.2■□□□□ 0.187e-7■■□□□ 14.2
PHF3-209ENST00000509330 MAPK8IP2Q13387 824 aaPredicted RBP16.2■□□□□ 0.18
PHF3-209ENST00000509330 PHLDB3Q6NSJ2 640 aa16.2■□□□□ 0.18
PHF3-209ENST00000509330 USP50Q70EL3 339 aaPredicted RBP16.2■□□□□ 0.18
PHF3-209ENST00000509330 RSRC2Q7L4I2 434 aaKnown RBP16.2■□□□□ 0.18
PHF3-209ENST00000509330 TRAPPC11Q7Z392 1133 aa16.2■□□□□ 0.18
PHF3-209ENST00000509330 CTAGE6Q86UF2 777 aa16.2■□□□□ 0.18
PHF3-209ENST00000509330 CTAGE4Q8IX94 777 aa16.2■□□□□ 0.18
PHF3-209ENST00000509330 GOLGA5Q8TBA6 731 aa16.2■□□□□ 0.18
PHF3-209ENST00000509330 TSGA10Q9BZW7 698 aa16.2■□□□□ 0.18
PHF3-209ENST00000509330 NUCKS1Q9H1E3 243 aaKnown RBP16.2■□□□□ 0.18
PHF3-209ENST00000509330 TAF1DQ9H5J8 278 aaPredicted RBP16.2■□□□□ 0.18
PHF3-209ENST00000509330 ATP6V0A4Q9HBG4 840 aa16.2■□□□□ 0.18
PHF3-209ENST00000509330 SYNGAP1Q96PV0 1343 aa16.2■□□□□ 0.18
PHF3-209ENST00000509330 EVI5O60447 810 aa16.2■□□□□ 0.18
PHF3-209ENST00000509330 CLSTN1O94985 981 aa16.2■□□□□ 0.18
PHF3-209ENST00000509330 DRP2Q13474 957 aa16.2■□□□□ 0.18
PHF3-209ENST00000509330 EMC2Q15006 297 aa16.2■□□□□ 0.18
PHF3-209ENST00000509330 KCTD19Q17RG1 926 aaPredicted RBP16.2■□□□□ 0.18
PHF3-209ENST00000509330 GJC2Q5T442 439 aaPredicted RBP16.2■□□□□ 0.18
PHF3-209ENST00000509330 MTERF4Q7Z6M4 381 aaKnown RBP16.2■□□□□ 0.18
PHF3-209ENST00000509330 CEP112Q8N8E3 955 aa16.2■□□□□ 0.18
PHF3-209ENST00000509330 PROCA1Q8NCQ7 364 aaPredicted RBP16.2■□□□□ 0.18
PHF3-209ENST00000509330 EHBP1Q8NDI1 1231 aa16.2■□□□□ 0.18
PHF3-209ENST00000509330 DNERQ8NFT8 737 aa16.2■□□□□ 0.18
PHF3-209ENST00000509330 MKNK1Q9BUB5 465 aa16.2■□□□□ 0.18
PHF3-209ENST00000509330 ACP6Q9NPH0 428 aa16.2■□□□□ 0.18
PHF3-209ENST00000509330 PTPRFP10586 1907 aa16.2■□□□□ 0.18
PHF3-209ENST00000509330 MYH10P35580 1976 aa16.2■□□□□ 0.18
PHF3-209ENST00000509330 RNASE9P60153 205 aaKnown RBP16.2■□□□□ 0.18
PHF3-209ENST00000509330 SNRNP35Q16560 246 aaKnown RBP16.2■□□□□ 0.18
PHF3-209ENST00000509330 SLC39A4Q6P5W5 647 aa16.2■□□□□ 0.18
PHF3-209ENST00000509330 ARHGEF19Q8IW93 802 aa16.2■□□□□ 0.18
PHF3-209ENST00000509330 COG1Q8WTW3 980 aa16.2■□□□□ 0.18
PHF3-209ENST00000509330 IWS1Q96ST2 819 aa16.2■□□□□ 0.18
PHF3-209ENST00000509330 UBE2TQ9NPD8 197 aaPredicted RBP16.2■□□□□ 0.18
PHF3-209ENST00000509330 FBXO40Q9UH90 709 aa16.2■□□□□ 0.18
PHF3-209ENST00000509330 LCTP09848 1927 aa16.19■□□□□ 0.18
PHF3-209ENST00000509330 DGAT1O75907 488 aa16.19■□□□□ 0.18
PHF3-209ENST00000509330 FARP2O94887 1054 aaPredicted RBP16.19■□□□□ 0.18
PHF3-209ENST00000509330 TCF7P36402 384 aaPredicted RBP16.19■□□□□ 0.18
PHF3-209ENST00000509330 HSDL1Q3SXM5 330 aa16.19■□□□□ 0.18
PHF3-209ENST00000509330 SEZ6Q53EL9 994 aa16.19■□□□□ 0.18
PHF3-209ENST00000509330 GLYCTKQ8IVS8 523 aa16.19■□□□□ 0.18
PHF3-209ENST00000509330 U2AF1L4Q8WU68 220 aaKnown RBP16.19■□□□□ 0.18
PHF3-209ENST00000509330 SENP7Q9BQF6 1050 aa16.19■□□□□ 0.18
PHF3-209ENST00000509330 NFASCO94856 1347 aa16.19■□□□□ 0.18
PHF3-209ENST00000509330 PDE2AO00408 941 aaPredicted RBP16.19■□□□□ 0.18
PHF3-209ENST00000509330 LCA5LO95447 670 aa16.19■□□□□ 0.18
PHF3-209ENST00000509330 OATP04181 439 aa16.19■□□□□ 0.18
PHF3-209ENST00000509330 H2AFXP16104 143 aaPredicted RBP16.19■□□□□ 0.18
PHF3-209ENST00000509330 NOP2P46087 812 aaKnown RBP16.19■□□□□ 0.18
PHF3-209ENST00000509330 KCTD2Q14681 263 aa16.19■□□□□ 0.18
PHF3-209ENST00000509330 XKR3Q5GH77 459 aa16.19■□□□□ 0.18
PHF3-209ENST00000509330 ARMC9Q7Z3E5 817 aa16.19■□□□□ 0.18
PHF3-209ENST00000509330 ASAP3Q8TDY4 903 aa16.19■□□□□ 0.18
PHF3-209ENST00000509330 SYN2Q92777 582 aaPredicted RBP16.19■□□□□ 0.18
PHF3-209ENST00000509330 GLG1Q92896 1179 aa16.19■□□□□ 0.18
PHF3-209ENST00000509330 SLC10A4Q96EP9 437 aa16.19■□□□□ 0.18
PHF3-209ENST00000509330 PNKPQ96T60 521 aa16.19■□□□□ 0.18
PHF3-209ENST00000509330 FAM213AQ9BRX8 229 aa16.19■□□□□ 0.18
PHF3-209ENST00000509330 PLEKHA4Q9H4M7 779 aa16.19■□□□□ 0.18
PHF3-209ENST00000509330 SUGCTQ9HAC7 445 aa16.19■□□□□ 0.18
PHF3-209ENST00000509330 PDGFCQ9NRA1 345 aa16.19■□□□□ 0.18
PHF3-209ENST00000509330 GSTTP1A0A1W2PQM5 241 aa16.18■□□□□ 0.18
PHF3-209ENST00000509330 GLTPD2A6NH11 291 aa16.18■□□□□ 0.18
PHF3-209ENST00000509330 F8VZ95 297 aa16.18■□□□□ 0.18
PHF3-209ENST00000509330 PALMO75781 387 aa16.18■□□□□ 0.18
PHF3-209ENST00000509330 ZMYND10O75800 440 aa16.18■□□□□ 0.18
PHF3-209ENST00000509330 ABCB4P21439 1286 aa16.18■□□□□ 0.18
PHF3-209ENST00000509330 MOGSQ13724 837 aa16.18■□□□□ 0.18
PHF3-209ENST00000509330 C1orf220Q5T0J3 134 aa16.18■□□□□ 0.18
PHF3-209ENST00000509330 INTS8Q75QN2 995 aaKnown RBP16.18■□□□□ 0.18
PHF3-209ENST00000509330 TRIM58Q8NG06 486 aa16.18■□□□□ 0.18
PHF3-209ENST00000509330 RDM1Q8NG50 284 aa16.18■□□□□ 0.18
PHF3-209ENST00000509330 KIFAP3Q92845 792 aa16.18■□□□□ 0.18
PHF3-209ENST00000509330 ALS2CR12Q96Q35 445 aa16.18■□□□□ 0.18
PHF3-209ENST00000509330 PCYT2Q99447 389 aa16.18■□□□□ 0.18
PHF3-209ENST00000509330 MMP19Q99542 508 aa16.18■□□□□ 0.18
PHF3-209ENST00000509330 CCDC94Q9BW85 323 aaPredicted RBP16.18■□□□□ 0.18
PHF3-209ENST00000509330 CXCL11O14625 94 aa16.18■□□□□ 0.18
PHF3-209ENST00000509330 MAPTP10636 758 aaKnown RBP16.18■□□□□ 0.18
PHF3-209ENST00000509330 C2orf54Q08AI8 447 aa16.18■□□□□ 0.18
PHF3-209ENST00000509330 PPIL2Q13356 520 aa16.18■□□□□ 0.18
PHF3-209ENST00000509330 ALKBH5Q6P6C2 394 aaKnown RBP16.18■□□□□ 0.18
PHF3-209ENST00000509330 ZBTB45Q96K62 511 aaPredicted RBP16.18■□□□□ 0.18
PHF3-209ENST00000509330 IFT74Q96LB3 600 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms