RNA–Protein interactions for RNA: ENST00000509297.5

SMAD5-205, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 854 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-205ENST00000509297 IRAK3Q9Y616 596 aa17.25■□□□□ 0.35
SMAD5-205ENST00000509297 CTDNEP1O95476 244 aa17.24■□□□□ 0.35
SMAD5-205ENST00000509297 TECP42680 631 aa17.24■□□□□ 0.35
SMAD5-205ENST00000509297 NPEPPSP55786 919 aa17.24■□□□□ 0.35
SMAD5-205ENST00000509297 SPIRE1Q08AE8 756 aa17.24■□□□□ 0.35
SMAD5-205ENST00000509297 GIT2Q14161 759 aa17.24■□□□□ 0.35
SMAD5-205ENST00000509297 PCBP1Q15365 356 aaKnown RBP eCLIP17.24■□□□□ 0.35
SMAD5-205ENST00000509297 TRIM67Q6ZTA4 783 aa17.24■□□□□ 0.35
SMAD5-205ENST00000509297 PIK3AP1Q6ZUJ8 805 aa17.24■□□□□ 0.35
SMAD5-205ENST00000509297 OTUD6AQ7L8S5 288 aa17.24■□□□□ 0.35
SMAD5-205ENST00000509297 SRGAP1Q7Z6B7 1085 aa17.24■□□□□ 0.35
SMAD5-205ENST00000509297 KSR1Q8IVT5 923 aa17.24■□□□□ 0.35
SMAD5-205ENST00000509297 OXER1Q8TDS5 423 aa17.24■□□□□ 0.35
SMAD5-205ENST00000509297 PRPF31Q8WWY3 499 aaKnown RBP17.24■□□□□ 0.35
SMAD5-205ENST00000509297 PSPC1Q8WXF1 523 aaKnown RBP17.24■□□□□ 0.35
SMAD5-205ENST00000509297 PGBD4Q96DM1 585 aa17.24■□□□□ 0.35
SMAD5-205ENST00000509297 TMEM169Q96HH4 297 aa17.24■□□□□ 0.35
SMAD5-205ENST00000509297 CEP170P1Q96L14 293 aa17.24■□□□□ 0.35
SMAD5-205ENST00000509297 NLRP4Q96MN2 994 aa17.24■□□□□ 0.35
SMAD5-205ENST00000509297 ZSWIM4Q9H7M6 989 aa17.24■□□□□ 0.35
SMAD5-205ENST00000509297 WRAP73Q9P2S5 460 aaPredicted RBP17.24■□□□□ 0.35
SMAD5-205ENST00000509297 ORC3Q9UBD5 711 aaPredicted RBP17.24■□□□□ 0.35
SMAD5-205ENST00000509297 STK39Q9UEW8 545 aa17.24■□□□□ 0.35
SMAD5-205ENST00000509297 ASAP2O43150 1006 aa17.23■□□□□ 0.35
SMAD5-205ENST00000509297 YWHABP31946 246 aaKnown RBP17.23■□□□□ 0.35
SMAD5-205ENST00000509297 ZXDAP98168 799 aa17.23■□□□□ 0.35
SMAD5-205ENST00000509297 TPRNQ4KMQ1 711 aa17.23■□□□□ 0.35
SMAD5-205ENST00000509297 NOMO2Q5JPE7 1267 aa17.23■□□□□ 0.35
SMAD5-205ENST00000509297 MRPL10Q7Z7H8 261 aaKnown RBP17.23■□□□□ 0.35
SMAD5-205ENST00000509297 DDX53Q86TM3 631 aaKnown RBP17.23■□□□□ 0.35
SMAD5-205ENST00000509297 TCP11Q8WWU5 503 aa17.23■□□□□ 0.35
SMAD5-205ENST00000509297 TNFRSF25Q93038 417 aa17.23■□□□□ 0.35
SMAD5-205ENST00000509297 NECTIN4Q96NY8 510 aa17.23■□□□□ 0.35
SMAD5-205ENST00000509297 LXNQ9BS40 222 aa17.23■□□□□ 0.35
SMAD5-205ENST00000509297 GJB4Q9NTQ9 266 aa17.23■□□□□ 0.35
SMAD5-205ENST00000509297 TBC1D13Q9NVG8 400 aa17.23■□□□□ 0.35
SMAD5-205ENST00000509297 HCFC2Q9Y5Z7 792 aa17.23■□□□□ 0.35
SMAD5-205ENST00000509297 TECTAO75443 2155 aa17.23■□□□□ 0.35
SMAD5-205ENST00000509297 ZNF318Q5VUA4 2279 aa17.23■□□□□ 0.35
SMAD5-205ENST00000509297 CNTNAP2Q9UHC6 1331 aa17.22■□□□□ 0.35
SMAD5-205ENST00000509297 CLASP2O75122 1294 aaKnown RBP17.22■□□□□ 0.35
SMAD5-205ENST00000509297 OFD1O75665 1012 aa17.22■□□□□ 0.35
SMAD5-205ENST00000509297 LYPLA2O95372 231 aa17.22■□□□□ 0.35
SMAD5-205ENST00000509297 BAG4O95429 457 aaKnown RBP17.22■□□□□ 0.35
SMAD5-205ENST00000509297 FDPSP14324 419 aaKnown RBP17.22■□□□□ 0.35
SMAD5-205ENST00000509297 AK2P54819 239 aa17.22■□□□□ 0.35
SMAD5-205ENST00000509297 ITIH3Q06033 890 aa17.22■□□□□ 0.35
SMAD5-205ENST00000509297 LAMTOR4Q0VGL1 99 aa17.22■□□□□ 0.35
SMAD5-205ENST00000509297 POTEDQ86YR6 584 aa17.22■□□□□ 0.35
SMAD5-205ENST00000509297 ZNF579Q8NAF0 562 aaKnown RBP17.22■□□□□ 0.35
SMAD5-205ENST00000509297 LPPQ93052 612 aa17.22■□□□□ 0.35
SMAD5-205ENST00000509297 IGSF21Q96ID5 467 aa17.22■□□□□ 0.35
SMAD5-205ENST00000509297 RPGRIP1Q96KN7 1286 aa17.22■□□□□ 0.35
SMAD5-205ENST00000509297 ZBP1Q9H171 429 aa17.22■□□□□ 0.35
SMAD5-205ENST00000509297 ADAM7Q9H2U9 754 aa17.22■□□□□ 0.35
SMAD5-205ENST00000509297 BRMS1Q9HCU9 246 aa17.22■□□□□ 0.35
SMAD5-205ENST00000509297 PCDHB2Q9Y5E7 798 aa17.22■□□□□ 0.35
SMAD5-205ENST00000509297 TMEM221A6NGB7 291 aa17.21■□□□□ 0.35
SMAD5-205ENST00000509297 M0R296 226 aa17.21■□□□□ 0.35
SMAD5-205ENST00000509297 MARCH6O60337 910 aa17.21■□□□□ 0.35
SMAD5-205ENST00000509297 EIF5BO60841 1220 aaKnown RBP17.21■□□□□ 0.35
SMAD5-205ENST00000509297 ZC3H11AO75152 810 aaKnown RBP eCLIP17.21■□□□□ 0.35
SMAD5-205ENST00000509297 CXCL14O95715 111 aa17.21■□□□□ 0.35
SMAD5-205ENST00000509297 NEFLP07196 543 aa17.21■□□□□ 0.35
SMAD5-205ENST00000509297 GALTP07902 379 aa17.21■□□□□ 0.35
SMAD5-205ENST00000509297 CTSAP10619 480 aa17.21■□□□□ 0.35
SMAD5-205ENST00000509297 HOXA11P31270 313 aaPredicted RBP17.21■□□□□ 0.35
SMAD5-205ENST00000509297 KRT2P35908 639 aa17.21■□□□□ 0.35
SMAD5-205ENST00000509297 POU5F1BQ06416 359 aa17.21■□□□□ 0.35
SMAD5-205ENST00000509297 EMC2Q15006 297 aa17.21■□□□□ 0.35
SMAD5-205ENST00000509297 EARS2Q5JPH6 523 aaKnown RBP17.21■□□□□ 0.35
SMAD5-205ENST00000509297 LLGL2Q6P1M3 1020 aa17.21■□□□□ 0.35
SMAD5-205ENST00000509297 VPS52Q8N1B4 723 aa17.21■□□□□ 0.35
SMAD5-205ENST00000509297 GTF3C6Q969F1 213 aa17.21■□□□□ 0.35
SMAD5-205ENST00000509297 TMEM143Q96AN5 459 aa17.21■□□□□ 0.35
SMAD5-205ENST00000509297 NRDE2Q9H7Z3 1164 aa17.21■□□□□ 0.35
SMAD5-205ENST00000509297 DZANK1Q9NVP4 752 aa17.21■□□□□ 0.35
SMAD5-205ENST00000509297 RGL1Q9NZL6 768 aa17.21■□□□□ 0.35
SMAD5-205ENST00000509297 KANSL3Q9P2N6 904 aa17.21■□□□□ 0.35
SMAD5-205ENST00000509297 MEIS3P2A8K0S8 358 aa17.2■□□□□ 0.34
SMAD5-205ENST00000509297 NT5C1B-RDH14C9J2C7 533 aa17.2■□□□□ 0.34
SMAD5-205ENST00000509297 SLITRK3O94933 977 aa17.2■□□□□ 0.34
SMAD5-205ENST00000509297 SRGAP2CP0DJJ0 459 aa17.2■□□□□ 0.34
SMAD5-205ENST00000509297 RNASELQ05823 741 aaKnown RBP17.2■□□□□ 0.34
SMAD5-205ENST00000509297 SIGLEC14Q08ET2 396 aa17.2■□□□□ 0.34
SMAD5-205ENST00000509297 NR5A1Q13285 461 aa17.2■□□□□ 0.34
SMAD5-205ENST00000509297 MXD4Q14582 209 aaPredicted RBP17.2■□□□□ 0.34
SMAD5-205ENST00000509297 NCAPH2Q6IBW4 605 aa17.2■□□□□ 0.34
SMAD5-205ENST00000509297 CES5AQ6NT32 575 aa17.2■□□□□ 0.34
SMAD5-205ENST00000509297 AGMOQ6ZNB7 445 aa17.2■□□□□ 0.34
SMAD5-205ENST00000509297 FERMT3Q86UX7 667 aa17.2■□□□□ 0.34
SMAD5-205ENST00000509297 TMEM173Q86WV6 379 aaPredicted RBP17.2■□□□□ 0.34
SMAD5-205ENST00000509297 IFNLR1Q8IU57 520 aaPredicted RBP17.2■□□□□ 0.34
SMAD5-205ENST00000509297 CNNM3Q8NE01 707 aa17.2■□□□□ 0.34
SMAD5-205ENST00000509297 URGCPQ8TCY9 931 aa17.2■□□□□ 0.34
SMAD5-205ENST00000509297 CCDC51Q96ER9 411 aa17.2■□□□□ 0.34
SMAD5-205ENST00000509297 FBXL18Q96ME1 805 aa17.2■□□□□ 0.34
SMAD5-205ENST00000509297 HSD17B14Q9BPX1 270 aa17.2■□□□□ 0.34
SMAD5-205ENST00000509297 MINDY3Q9H8M7 445 aa17.2■□□□□ 0.34
SMAD5-205ENST00000509297 UBN1Q9NPG3 1134 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms