RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 GET4Q7L5D6 327 aaPredicted RBP4.45□□□□□ -1.7
RNF4-211ENST00000509206 LRRC43Q8N309 656 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 PHTF2Q8N3S3 785 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 PLPP7Q8NBV4 271 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 GLIS3Q8NEA6 775 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 AUTS2Q8WXX7 1259 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 ARHGAP45Q92619 1136 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 LSM14BQ9BX40 385 aaKnown RBP4.45□□□□□ -1.7
RNF4-211ENST00000509206 CELF4Q9BZC1 486 aaKnown RBP4.45□□□□□ -1.7
RNF4-211ENST00000509206 NAPBQ9H115 298 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 CWH43Q9H720 699 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 VAT1LQ9HCJ6 419 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 LTB4R2Q9NPC1 389 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 PXMP2Q9NR77 195 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 SLC2A4RGQ9NR83 387 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 TMEM161AQ9NX61 479 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.45□□□□□ -1.7
RNF4-211ENST00000509206 EPS15L1Q9UBC2 864 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 EXOC6BQ9Y2D4 811 aa4.45□□□□□ -1.7
RNF4-211ENST00000509206 FCF1Q9Y324 198 aaKnown RBP4.45□□□□□ -1.7
RNF4-211ENST00000509206 V9GY48 417 aaPredicted RBP4.45□□□□□ -1.7
RNF4-211ENST00000509206 MAST4O15021 2626 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 CEP295Q9C0D2 2601 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 UNC79Q9P2D8 2635 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 GCN1Q92616 2671 aaKnown RBP4.44□□□□□ -1.7
RNF4-211ENST00000509206 NAV2Q8IVL1 2488 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 RRN3P2A6NIE6 340 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 NT5C1B-RDH14C9J2C7 533 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 LZTS3O60299 673 aaPredicted RBP4.44□□□□□ -1.7
RNF4-211ENST00000509206 NMT2O60551 498 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 SSBP05455 408 aaKnown RBP eCLIP4.44□□□□□ -1.7
RNF4-211ENST00000509206 CT47B1P0C2W7 299 aaPredicted RBP4.44□□□□□ -1.7
RNF4-211ENST00000509206 MYBP10242 640 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 LAMP2P13473 410 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 CD72P21854 359 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 MARK3P27448 753 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 CNR2P34972 360 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 CCR3P51677 355 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 SP2Q02086 613 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 PPARAQ07869 468 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 MTAPQ13126 283 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 AGERQ15109 404 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 CDC37Q16543 378 aaPredicted RBP4.44□□□□□ -1.7
RNF4-211ENST00000509206 EML3Q32P44 896 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 MAP7D1Q3KQU3 841 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 LINC01559Q495D7 138 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 RRP12Q5JTH9 1297 aaKnown RBP4.44□□□□□ -1.7
RNF4-211ENST00000509206 TMEM164Q5U3C3 297 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 METTL7BQ6UX53 244 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 CYP26C1Q6V0L0 522 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 ZNF852Q6ZMS4 543 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 VSIG10LQ86VR7 867 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 BPHLQ86WA6 291 aaPredicted RBP4.44□□□□□ -1.7
RNF4-211ENST00000509206 FCHSD1Q86WN1 690 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 TRIM50Q86XT4 487 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 LURAP1LQ8IV03 231 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 IFNL3Q8IZI9 196 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 NME8Q8N427 588 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 ST13P5Q8NFI4 369 aaPredicted RBP4.44□□□□□ -1.7
RNF4-211ENST00000509206 SLC22A17Q8WUG5 538 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 SMG7Q92540 1137 aaKnown RBP4.44□□□□□ -1.7
RNF4-211ENST00000509206 BAP1Q92560 729 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 MYADMQ96S97 322 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 PDCD2LQ9BRP1 358 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 SCNM1Q9BWG6 230 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 IRX2Q9BZI1 471 aaPredicted RBP4.44□□□□□ -1.7
RNF4-211ENST00000509206 UBA5Q9GZZ9 404 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 ARRDC1-AS1Q9H2J1 176 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 WDR6Q9NNW5 1121 aaKnown RBP4.44□□□□□ -1.7
RNF4-211ENST00000509206 RGS18Q9NS28 235 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 ERAP1Q9NZ08 941 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 COL20A1Q9P218 1284 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 NOVA2Q9UNW9 492 aaKnown RBP4.44□□□□□ -1.7
RNF4-211ENST00000509206 MTF2Q9Y483 593 aaPredicted RBP4.44□□□□□ -1.7
RNF4-211ENST00000509206 NUMBLQ9Y6R0 609 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 ATG2AQ2TAZ0 1938 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 BAZ2AQ9UIF9 1905 aaKnown RBP4.44□□□□□ -1.7
RNF4-211ENST00000509206 CLUHO75153 1309 aa4.44□□□□□ -1.7
RNF4-211ENST00000509206 ASPMQ8IZT6 3477 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 MYH4Q9Y623 1939 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 INPPL1O15357 1258 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 ZBTB24O43167 697 aaPredicted RBP4.43□□□□□ -1.7
RNF4-211ENST00000509206 GPAA1O43292 621 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 CHGBP05060 677 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 ZNF806P0C7X5 589 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 GOLGA8HP0CJ92 632 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 CTSAP10619 480 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 TCF7P36402 384 aaPredicted RBP4.43□□□□□ -1.7
RNF4-211ENST00000509206 RPS9P46781 194 aaKnown RBP4.43□□□□□ -1.7
RNF4-211ENST00000509206 CXCL12P48061 93 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 POLGP54098 1239 aaPredicted RBP4.43□□□□□ -1.7
RNF4-211ENST00000509206 BCAR1P56945 870 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 ADAM17P78536 824 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 ADCY1Q08828 1119 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 ZNF543Q08ER8 600 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 PGM5Q15124 567 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 SF3A2Q15428 464 aaKnown RBP4.43□□□□□ -1.7
RNF4-211ENST00000509206 CCDC6Q16204 474 aa4.43□□□□□ -1.7
RNF4-211ENST00000509206 GPATCH4Q5T3I0 446 aaKnown RBP4.43□□□□□ -1.7
RNF4-211ENST00000509206 HEATR6Q6AI08 1181 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms