RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 DRG2P55039 364 aaKnown RBP4.24□□□□□ -1.73
NEDD4-209ENST00000508871 GFPT1Q06210 699 aaPredicted RBP4.24□□□□□ -1.73
NEDD4-209ENST00000508871 TEFQ10587 303 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 FASTKD5Q7L8L6 764 aaKnown RBP4.24□□□□□ -1.73
NEDD4-209ENST00000508871 GSTA5Q7RTV2 222 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 GALNT7Q86SF2 657 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 ALDH16A1Q8IZ83 802 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 PHC3Q8NDX5 983 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 ZUFSPQ96AP4 578 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 PLIN2Q99541 437 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 TEX13AQ9BXU3 409 aaPredicted RBP4.24□□□□□ -1.73
NEDD4-209ENST00000508871 OCEL1Q9H607 264 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 DDX21Q9NR30 783 aaKnown RBP eCLIP4.24□□□□□ -1.73
NEDD4-209ENST00000508871 COX16Q9P0S2 106 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 SAMD15Q9P1V8 674 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 PCDHGB4Q9UN71 923 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 EDARQ9UNE0 448 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 RASA4BC9J798 803 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 KERAO60938 352 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 IGHDP01880 384 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 SNRPB2P08579 225 aaKnown RBP4.24□□□□□ -1.73
NEDD4-209ENST00000508871 NCAM1P13591 858 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 IL2RBP14784 551 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 GNAT2P19087 354 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 HMGB2P26583 209 aaKnown RBP4.24□□□□□ -1.73
NEDD4-209ENST00000508871 EEF1DP29692 281 aaKnown RBP4.24□□□□□ -1.73
NEDD4-209ENST00000508871 VEPH1Q14D04 833 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 PRPF40BQ6NWY9 871 aaKnown RBP4.24□□□□□ -1.73
NEDD4-209ENST00000508871 FAM117BQ6P1L5 589 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 MFSD6Q6ZSS7 791 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 KIAA0907Q7Z7F0 614 aaPredicted RBP4.24□□□□□ -1.73
NEDD4-209ENST00000508871 TTC6Q86TZ1 520 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 PPP1R14BQ96C90 147 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 ERLEC1Q96DZ1 483 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 MS4A3Q96HJ5 214 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 LRCH3Q96II8 777 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 PIGSQ96S52 555 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 TSG101Q99816 390 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 PIMREGQ9BSJ6 248 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 DRC3Q9H069 523 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 MRPL15Q9P015 296 aaKnown RBP4.24□□□□□ -1.73
NEDD4-209ENST00000508871 PCDHA4Q9UN74 947 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 DUOX1Q9NRD9 1551 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 NUP98P52948 1817 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 DDX39AO00148 427 aaKnown RBP4.24□□□□□ -1.73
NEDD4-209ENST00000508871 GSTA4O15217 222 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 TADA3O75528 432 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 GHRHP01286 108 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 PGRP06401 933 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 MTHFD1P11586 935 aaKnown RBP4.24□□□□□ -1.73
NEDD4-209ENST00000508871 FDPSP14324 419 aaKnown RBP4.24□□□□□ -1.73
NEDD4-209ENST00000508871 PHKA2P46019 1235 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 MRPL12P52815 198 aaKnown RBP4.24□□□□□ -1.73
NEDD4-209ENST00000508871 HSPA2P54652 639 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 MAMLD1Q13495 774 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 GPR68Q15743 365 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 MAPK11Q15759 364 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 NFIL3Q16649 462 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 FILIP1LQ4L180 1135 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 FAM209BQ5JX69 171 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 GPR158Q5T848 1215 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 ATPAF1Q5TC12 328 aaPredicted RBP4.24□□□□□ -1.73
NEDD4-209ENST00000508871 CWF19L1Q69YN2 538 aaKnown RBP4.24□□□□□ -1.73
NEDD4-209ENST00000508871 RUFY4Q6ZNE9 571 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 PDZD4Q76G19 769 aaPredicted RBP4.24□□□□□ -1.73
NEDD4-209ENST00000508871 SYTL4Q96C24 671 aaPredicted RBP4.24□□□□□ -1.73
NEDD4-209ENST00000508871 THUMPD3Q9BV44 507 aaKnown RBP4.24□□□□□ -1.73
NEDD4-209ENST00000508871 LSM14BQ9BX40 385 aaKnown RBP4.24□□□□□ -1.73
NEDD4-209ENST00000508871 PACSIN1Q9BY11 444 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 TMEM39AQ9NV64 488 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 RAI14Q9P0K7 980 aa4.24□□□□□ -1.73
NEDD4-209ENST00000508871 DBF4Q9UBU7 674 aaPredicted RBP4.24□□□□□ -1.73
NEDD4-209ENST00000508871 PNMA8BQ9ULN7 279 aaPredicted RBP4.24□□□□□ -1.73
NEDD4-209ENST00000508871 MAST2Q6P0Q8 1798 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 FAM47DPA6NHR8 397 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 H7C1D1 291 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 FKBP9O95302 570 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 CUL4AQ13619 759 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 ACAP1Q15027 740 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 FKBP9P1Q75LS8 142 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 CNTROBQ8N137 903 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 OR8H3Q8N146 312 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 STAG2Q8N3U4 1231 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 EHBP1Q8NDI1 1231 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 OR6P1Q8NGX9 317 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 TBC1D22AQ8WUA7 517 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 SNX21Q969T3 373 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 TMEM87BQ96K49 555 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 ZFYVE1Q9HBF4 777 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 SARS2Q9NP81 518 aaKnown RBP4.23□□□□□ -1.73
NEDD4-209ENST00000508871 COMMD8Q9NX08 183 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 DACT1Q9NYF0 836 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 GPR34Q9UPC5 381 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 SPATA31A6Q5VVP1 1343 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 BTAF1O14981 1849 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 LINC00854A0A1B0GVQ3 168 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.23□□□□□ -1.73
NEDD4-209ENST00000508871 C2CD2LO14523 706 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 ULK1O75385 1050 aa4.23□□□□□ -1.73
NEDD4-209ENST00000508871 GNAI2P04899 355 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms