RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 TMEM206Q9H813 350 aa12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 DMAC2Q9NW81 257 aa12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 VPS18Q9P253 973 aa12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 ADAM21Q9UKJ8 722 aa12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 PCDHGC5Q9Y5F6 944 aa12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 GRID2IPA4D2P6 1211 aa12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 ERICH4A6NGS2 130 aa12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 TMEM88BA6NKF7 163 aa12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 LRRIQ3A6PVS8 624 aaPredicted RBP12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 BUB1O43683 1085 aa12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 PLS3P13797 630 aa12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 COPB2P35606 906 aa12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 PSMC2P35998 433 aaKnown RBP12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 KCNA1Q09470 495 aa12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 STXBP2Q15833 593 aa12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 CCNI2Q6ZMN8 369 aaPredicted RBP12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 OTUD6AQ7L8S5 288 aa12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 GPIHBP1Q8IV16 184 aa12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 C12orf56Q8IXR9 622 aa12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 ATP6V0A1Q93050 837 aa12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 CCDC43Q96MW1 224 aaKnown RBP12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 TLR10Q9BXR5 811 aa12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 BCAS3Q9H6U6 928 aa12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 CALCOCO1Q9P1Z2 691 aa12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 DAAM1Q9Y4D1 1078 aa12.59□□□□□ -0.39
PRPF40B-203ENST00000508736 A0A087X0T9 212 aa12.58□□□□□ -0.4
PRPF40B-203ENST00000508736 UNCXA6NJT0 531 aa12.58□□□□□ -0.4
PRPF40B-203ENST00000508736 PSAPP07602 524 aa12.58□□□□□ -0.4
PRPF40B-203ENST00000508736 FAM228BP0C875 321 aa12.58□□□□□ -0.4
PRPF40B-203ENST00000508736 PON1P27169 355 aa12.58□□□□□ -0.4
PRPF40B-203ENST00000508736 PRKCIP41743 596 aa12.58□□□□□ -0.4
PRPF40B-203ENST00000508736 UGCGQ16739 394 aa12.58□□□□□ -0.4
PRPF40B-203ENST00000508736 ZC2HC1CQ53FD0 456 aaPredicted RBP12.58□□□□□ -0.4
PRPF40B-203ENST00000508736 C8orf74Q6P047 294 aa12.58□□□□□ -0.4
PRPF40B-203ENST00000508736 FAM186BQ8IYM0 893 aa12.58□□□□□ -0.4
PRPF40B-203ENST00000508736 ANKRD35Q8N283 1001 aa12.58□□□□□ -0.4
PRPF40B-203ENST00000508736 OTUD5Q96G74 571 aa12.58□□□□□ -0.4
PRPF40B-203ENST00000508736 SPATC1LQ9H0A9 340 aa12.58□□□□□ -0.4
PRPF40B-203ENST00000508736 C17orf75Q9HAS0 396 aa12.58□□□□□ -0.4
PRPF40B-203ENST00000508736 JPH1Q9HDC5 661 aaPredicted RBP12.58□□□□□ -0.4
PRPF40B-203ENST00000508736 GCNT4Q9P109 453 aa12.58□□□□□ -0.4
PRPF40B-203ENST00000508736 BTBD7Q9P203 1132 aa12.58□□□□□ -0.4
PRPF40B-203ENST00000508736 SLC9A2Q9UBY0 812 aa12.58□□□□□ -0.4
PRPF40B-203ENST00000508736 ADAMTS1Q9UHI8 967 aa12.58□□□□□ -0.4
PRPF40B-203ENST00000508736 SALL4Q9UJQ4 1053 aa12.58□□□□□ -0.4
PRPF40B-203ENST00000508736 ABT1Q9ULW3 272 aaKnown RBP12.58□□□□□ -0.4
PRPF40B-203ENST00000508736 HPCAL4Q9UM19 191 aa12.58□□□□□ -0.4
PRPF40B-203ENST00000508736 AGTPBP1Q9UPW5 1226 aa12.58□□□□□ -0.4
PRPF40B-203ENST00000508736 LCTP09848 1927 aa12.58□□□□□ -0.4
PRPF40B-203ENST00000508736 NCK2O43639 380 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 PALMO75781 387 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 GFPT2O94808 682 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 SLC25A27O95847 323 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 SLC9A1P19634 815 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 EDNRBP24530 442 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 TNFRSF8P28908 595 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 IRX3P78415 501 aaPredicted RBP12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 GTF2BQ00403 316 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 PPP2R5AQ15172 486 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 GADL1Q6ZQY3 521 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 SAPCD2Q86UD0 394 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 TAF4BQ92750 862 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 SLC35C1Q96A29 364 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 OPTNQ96CV9 577 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 HVCN1Q96D96 273 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 SELENOOQ9BVL4 669 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 POLD4Q9HCU8 107 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 AGPAT3Q9NRZ7 376 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 STIM2Q9P246 746 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 TRPM7Q96QT4 1865 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 K7ENM7 598 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 CES2O00748 559 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 ACTN1P12814 892 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 FERP16591 822 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 KLRC1P26715 233 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 CXCR5P32302 372 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 ALDH5A1P51649 535 aaPredicted RBP12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 NCKAP1LP55160 1127 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 APBA1Q02410 837 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 PTK2Q05397 1052 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 ENOX2Q16206 610 aaKnown RBP12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 XKR9Q5GH70 373 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 MEI1Q5TIA1 1274 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 ABHD15Q6UXT9 468 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 ANO5Q75V66 913 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 FASTKD5Q7L8L6 764 aaKnown RBP12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 IRF2BP2Q7Z5L9 587 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 AENQ8WTP8 325 aaKnown RBP12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 FRMD4BQ9Y2L6 1034 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 FAN1Q9Y2M0 1017 aa12.57□□□□□ -0.4
PRPF40B-203ENST00000508736 BACH1O14867 736 aa12.56□□□□□ -0.4
PRPF40B-203ENST00000508736 CLIC2O15247 247 aa12.56□□□□□ -0.4
PRPF40B-203ENST00000508736 MAPK13O15264 365 aa12.56□□□□□ -0.4
PRPF40B-203ENST00000508736 STBD1O95210 358 aa12.56□□□□□ -0.4
PRPF40B-203ENST00000508736 ATG7O95352 703 aa12.56□□□□□ -0.4
PRPF40B-203ENST00000508736 MATR3P43243 847 aaKnown RBP eCLIP12.56□□□□□ -0.4
PRPF40B-203ENST00000508736 LMAN1P49257 510 aa12.56□□□□□ -0.4
PRPF40B-203ENST00000508736 CASP4P49662 377 aa12.56□□□□□ -0.4
PRPF40B-203ENST00000508736 ZNF157P51786 506 aaPredicted RBP12.56□□□□□ -0.4
PRPF40B-203ENST00000508736 EPHB4P54760 987 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms