RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 WHAMMQ8TF30 809 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 DRC1Q96MC2 740 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 LSM14BQ9BX40 385 aaKnown RBP11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 PLCB1Q9NQ66 1216 aa11.99□□□□□ -0.49
SH3RF1-203ENST00000508685 CENPFP49454 3210 aa11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 MYH10P35580 1976 aa11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 CALUO43852 315 aaPredicted RBP11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 NOL4O94818 638 aa11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 KCNA2P16389 499 aa11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 IRAK1P51617 712 aa11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 KRT76Q01546 638 aa11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 TTLL12Q14166 644 aaPredicted RBP11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 ASIC2Q16515 512 aa11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 MEI1Q5TIA1 1274 aa11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 EMC10Q5UCC4 262 aa11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 PLA2G4FQ68DD2 849 aa11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 XRRA1Q6P2D8 792 aa11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 NLRX1Q86UT6 975 aa11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 CD302Q8IX05 232 aa11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 TAF4BQ92750 862 aa11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 GPRASP2Q96D09 838 aa11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 PBKQ96KB5 322 aa11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 EFCC1Q9HA90 598 aa11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 KIAA1217Q5T5P2 1943 aa11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 A0A0G2JLL6 359 aaPredicted RBP11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 EBAG9O00559 213 aa11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 BACH1O14867 736 aa11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 EIF3DO15371 548 aaKnown RBP eCLIP11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 HSPA6P17066 643 aa11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 MATR3P43243 847 aaKnown RBP eCLIP11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 JAK3P52333 1124 aa11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 NPEPPSP55786 919 aa11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 POLR2FP61218 127 aaKnown RBP11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 KLHL30Q0D2K2 578 aa11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 PRRT2Q7Z6L0 340 aaPredicted RBP11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 ANKRD13AQ8IZ07 590 aa11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 ANKRD35Q8N283 1001 aa11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 LMBR1Q8WVP7 490 aa11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 R3HDMLQ9H3Y0 253 aa11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 METTL14Q9HCE5 456 aaKnown RBP11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 GPRC5CQ9NQ84 441 aa11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 SEL1LQ9UBV2 794 aa11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 ARMCX3Q9UH62 379 aaPredicted RBP11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 DBR1Q9UK59 544 aaKnown RBP11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 FBXL5Q9UKA1 691 aa11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 DOCK5Q9H7D0 1870 aa11.98□□□□□ -0.49
SH3RF1-203ENST00000508685 A0A0G2JMZ2 1700 aa11.97□□□□□ -0.49
SH3RF1-203ENST00000508685 LOXHD1Q8IVV2 1947 aa11.97□□□□□ -0.49
SH3RF1-203ENST00000508685 A0A087WUV0 522 aaPredicted RBP11.97□□□□□ -0.49
SH3RF1-203ENST00000508685 PALMO75781 387 aa11.97□□□□□ -0.49
SH3RF1-203ENST00000508685 SFNP31947 248 aa11.97□□□□□ -0.49
SH3RF1-203ENST00000508685 PSMC5P62195 406 aa11.97□□□□□ -0.49
SH3RF1-203ENST00000508685 PPATQ06203 517 aa11.97□□□□□ -0.49
SH3RF1-203ENST00000508685 KCNH2Q12809 1159 aa11.97□□□□□ -0.49
SH3RF1-203ENST00000508685 DCAF17Q5H9S7 520 aaPredicted RBP11.97□□□□□ -0.49
SH3RF1-203ENST00000508685 CFAP58Q5T655 872 aa11.97□□□□□ -0.49
SH3RF1-203ENST00000508685 ANO5Q75V66 913 aa11.97□□□□□ -0.49
SH3RF1-203ENST00000508685 C4orf19Q8IY42 314 aa11.97□□□□□ -0.49
SH3RF1-203ENST00000508685 HDAC7Q8WUI4 952 aa11.97□□□□□ -0.49
SH3RF1-203ENST00000508685 CCDC43Q96MW1 224 aaKnown RBP11.97□□□□□ -0.49
SH3RF1-203ENST00000508685 GDAP1L1Q96MZ0 367 aa11.97□□□□□ -0.49
SH3RF1-203ENST00000508685 PAGR1Q9BTK6 254 aa11.97□□□□□ -0.49
SH3RF1-203ENST00000508685 NLRC4Q9NPP4 1024 aa11.97□□□□□ -0.49
SH3RF1-203ENST00000508685 RBM12Q9NTZ6 932 aaKnown RBP11.97□□□□□ -0.49
SH3RF1-203ENST00000508685 LCMT1Q9UIC8 334 aa11.97□□□□□ -0.49
SH3RF1-203ENST00000508685 MYH11P35749 1972 aa11.97□□□□□ -0.49
SH3RF1-203ENST00000508685 SRRM3A6NNA2 597 aaPredicted RBP11.96□□□□□ -0.49
SH3RF1-203ENST00000508685 K7ENM7 598 aa11.96□□□□□ -0.49
SH3RF1-203ENST00000508685 EIF3HO15372 352 aaKnown RBP eCLIP11.96□□□□□ -0.49
SH3RF1-203ENST00000508685 TLR2O60603 784 aa11.96□□□□□ -0.49
SH3RF1-203ENST00000508685 LYPLA2O95372 231 aa11.96□□□□□ -0.49
SH3RF1-203ENST00000508685 RPL13P26373 211 aaKnown RBP11.96□□□□□ -0.49
SH3RF1-203ENST00000508685 IRX3P78415 501 aaPredicted RBP11.96□□□□□ -0.49
SH3RF1-203ENST00000508685 MAP1SQ66K74 1059 aaPredicted RBP11.96□□□□□ -0.49
SH3RF1-203ENST00000508685 ZNF746Q6NUN9 644 aaPredicted RBP11.96□□□□□ -0.49
SH3RF1-203ENST00000508685 B4GALNT4Q76KP1 1039 aa11.96□□□□□ -0.49
SH3RF1-203ENST00000508685 VPS36Q86VN1 386 aa11.96□□□□□ -0.49
SH3RF1-203ENST00000508685 ERO1BQ86YB8 467 aa11.96□□□□□ -0.49
SH3RF1-203ENST00000508685 FMNL3Q8IVF7 1028 aa11.96□□□□□ -0.49
SH3RF1-203ENST00000508685 GSPT2Q8IYD1 628 aaKnown RBP11.96□□□□□ -0.49
SH3RF1-203ENST00000508685 ZC3H15Q8WU90 426 aaKnown RBP11.96□□□□□ -0.49
SH3RF1-203ENST00000508685 RIN2Q8WYP3 895 aaPredicted RBP11.96□□□□□ -0.49
SH3RF1-203ENST00000508685 MOV10L1Q9BXT6 1211 aaKnown RBP11.96□□□□□ -0.49
SH3RF1-203ENST00000508685 ASCC2Q9H1I8 757 aaPredicted RBP11.96□□□□□ -0.49
SH3RF1-203ENST00000508685 JPH1Q9HDC5 661 aaPredicted RBP11.96□□□□□ -0.49
SH3RF1-203ENST00000508685 SALL4Q9UJQ4 1053 aa11.96□□□□□ -0.49
SH3RF1-203ENST00000508685 PCDHB13Q9Y5F0 798 aa11.96□□□□□ -0.49
SH3RF1-203ENST00000508685 PCDHA10Q9Y5I2 948 aa11.96□□□□□ -0.49
SH3RF1-203ENST00000508685 SPDYE5A6NIY4 337 aa11.96□□□□□ -0.5
SH3RF1-203ENST00000508685 MAFGO15525 162 aa11.96□□□□□ -0.5
SH3RF1-203ENST00000508685 BUB1O43683 1085 aa11.96□□□□□ -0.5
SH3RF1-203ENST00000508685 ZNF862O60290 1169 aa11.96□□□□□ -0.5
SH3RF1-203ENST00000508685 PPP1R37O75864 691 aa11.96□□□□□ -0.5
SH3RF1-203ENST00000508685 GFPT2O94808 682 aa11.96□□□□□ -0.5
SH3RF1-203ENST00000508685 XRCC5P13010 732 aaKnown RBP11.96□□□□□ -0.5
SH3RF1-203ENST00000508685 CXCR5P32302 372 aa11.96□□□□□ -0.5
SH3RF1-203ENST00000508685 NF2P35240 595 aa11.96□□□□□ -0.5
SH3RF1-203ENST00000508685 SP2Q02086 613 aa11.96□□□□□ -0.5
SH3RF1-203ENST00000508685 RAPGEF1Q13905 1077 aa11.96□□□□□ -0.5
SH3RF1-203ENST00000508685 KIAA0753Q2KHM9 967 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms