RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 MS4A14Q96JA4 679 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 ERP44Q9BS26 406 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 PARVGQ9HBI0 331 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 CYP4F11Q9HBI6 524 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 RXFP1Q9HBX9 757 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 NPHS2Q9NP85 383 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 ADA2Q9NZK5 511 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 PSMC3IPQ9P2W1 217 aaPredicted RBP7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 SUN2Q9UH99 717 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 ANAPC7Q9UJX3 599 aa7.78□□□□□ -1.16
UBE2D3-224ENST00000508474 CLIC2O15247 247 aa7.77□□□□□ -1.16
UBE2D3-224ENST00000508474 FKBP6O75344 327 aa7.77□□□□□ -1.16
UBE2D3-224ENST00000508474 PDE8BO95263 885 aa7.77□□□□□ -1.16
UBE2D3-224ENST00000508474 ZBED1O96006 694 aa7.77□□□□□ -1.16
UBE2D3-224ENST00000508474 KITP10721 976 aa7.77□□□□□ -1.16
UBE2D3-224ENST00000508474 ATP2C1P98194 919 aaPredicted RBP7.77□□□□□ -1.16
UBE2D3-224ENST00000508474 KDSRQ06136 332 aa7.77□□□□□ -1.16
UBE2D3-224ENST00000508474 GABPAQ06546 454 aa7.77□□□□□ -1.16
UBE2D3-224ENST00000508474 THOC5Q13769 683 aaKnown RBP7.77□□□□□ -1.16
UBE2D3-224ENST00000508474 TFDP2Q14188 446 aa7.77□□□□□ -1.16
UBE2D3-224ENST00000508474 FLOT2Q14254 428 aa7.77□□□□□ -1.16
UBE2D3-224ENST00000508474 SETD3Q86TU7 594 aaPredicted RBP7.77□□□□□ -1.16
UBE2D3-224ENST00000508474 NLRX1Q86UT6 975 aa7.77□□□□□ -1.16
UBE2D3-224ENST00000508474 KIRREL3Q8IZU9 778 aa7.77□□□□□ -1.16
UBE2D3-224ENST00000508474 ADSSL1Q8N142 457 aa7.77□□□□□ -1.16
UBE2D3-224ENST00000508474 ZNF513Q8N8E2 541 aaPredicted RBP7.77□□□□□ -1.16
UBE2D3-224ENST00000508474 ZBTB38Q8NAP3 1195 aaPredicted RBP7.77□□□□□ -1.16
UBE2D3-224ENST00000508474 POMGNT1Q8WZA1 660 aa7.77□□□□□ -1.16
UBE2D3-224ENST00000508474 ZNF496Q96IT1 587 aaPredicted RBP7.77□□□□□ -1.16
UBE2D3-224ENST00000508474 PABPC3Q9H361 631 aaKnown RBP7.77□□□□□ -1.16
UBE2D3-224ENST00000508474 CYP26B1Q9NR63 512 aa7.77□□□□□ -1.16
UBE2D3-224ENST00000508474 FAM170AA1A519 330 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 CAPN9O14815 690 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 SLC1A1P43005 524 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 NUP107P57740 925 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 IFRD2Q12894 506 aaPredicted RBP7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 ZNF211Q13398 564 aaPredicted RBP7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 BRDTQ58F21 947 aaPredicted RBP7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 MAPKAPK5Q8IW41 473 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 CCDC117Q8IWD4 279 aaPredicted RBP7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 ZBED8Q8IZ13 594 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 RASGRP4Q8TDF6 673 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 DHX38Q92620 1227 aaKnown RBP7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 EME1Q96AY2 570 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 WDR11Q9BZH6 1224 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 PUS7LQ9H0K6 701 aaKnown RBP7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 SNX25Q9H3E2 840 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 CNGB3Q9NQW8 809 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 BTBD7Q9P203 1132 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 CORO1CQ9ULV4 474 aaPredicted RBP7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 A0A1B0GW55 424 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 KIF28PB7ZC32 967 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 SMAPO00193 183 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 ABLIM1O14639 778 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 DUX4L2P0CJ85 424 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 DUX4L3P0CJ86 424 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 DUX4L4P0CJ87 422 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 DUX4L5P0CJ88 424 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 DUX4L6P0CJ89 424 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 DUX4L7P0CJ90 424 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 NLRP11P59045 1033 aaKnown RBP7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 CDK17Q00537 523 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 USH1GQ495M9 461 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 XKR9Q5GH70 373 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 RFX8Q6ZV50 586 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 JAMLQ86YT9 394 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 CROCCP3Q8IVE0 287 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 RAD54LQ92698 747 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 RIOK1Q9BRS2 568 aaKnown RBP7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 THTPAQ9BU02 230 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 ZNF446Q9NWS9 450 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 SUCLA2Q9P2R7 463 aaPredicted RBP7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 DUX4Q9UBX2 424 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 PDS5AQ29RF7 1337 aaKnown RBP7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 KDM6BO15054 1643 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 FOXN1O15353 648 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 POLR2MP0CAP2 368 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 S100A5P33763 92 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 DYNLT1P63172 113 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 EXOSC10Q01780 885 aaKnown RBP7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 PTPN12Q05209 780 aaKnown RBP7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 LONRF1Q17RB8 773 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 CC2D2BQ6DHV5 1058 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 OR9Q1Q8NGQ5 310 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 CHURC1Q8WUH1 139 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 CASKIN2Q8WXE0 1202 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 A1CFQ9NQ94 594 aaKnown RBP7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 GIMAP4Q9NUV9 329 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 DDX56Q9NY93 547 aaKnown RBP7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 DBR1Q9UK59 544 aaKnown RBP7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 MRPL11Q9Y3B7 192 aaKnown RBP7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 DTNAQ9Y4J8 743 aa7.77□□□□□ -1.17
UBE2D3-224ENST00000508474 WDR64B1ANS9 1081 aa7.76□□□□□ -1.17
UBE2D3-224ENST00000508474 ATP9AO75110 1047 aa7.76□□□□□ -1.17
UBE2D3-224ENST00000508474 TMEM191BP0C7N4 346 aa7.76□□□□□ -1.17
UBE2D3-224ENST00000508474 ATP4AP20648 1035 aa7.76□□□□□ -1.17
UBE2D3-224ENST00000508474 PTPN4P29074 926 aa7.76□□□□□ -1.17
UBE2D3-224ENST00000508474 IGBP1P78318 339 aa7.76□□□□□ -1.17
UBE2D3-224ENST00000508474 SP4Q02446 784 aa7.76□□□□□ -1.17
UBE2D3-224ENST00000508474 MRPL28Q13084 256 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms