RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 KAT6AQ92794 2004 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 SYCE3A1L190 88 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 AKR1B10O60218 316 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 LZTS3O60299 673 aaPredicted RBP3.2□□□□□ -1.9
NEDD4-208ENST00000508342 RHOXF2BP0C7M4 288 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 TMEM191BP0C7N4 346 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 ZNF853P0CG23 659 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 RFC5P40937 340 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 RECQLP46063 649 aaPredicted RBP3.2□□□□□ -1.9
NEDD4-208ENST00000508342 UBXN2BQ14CS0 331 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 SNX17Q15036 470 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 ZNF568Q3ZCX4 644 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 ZMYM1Q5SVZ6 1142 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 IL31Q6EBC2 164 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 ZNF280DQ6N043 979 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 C15orf52Q6ZUT6 534 aaKnown RBP3.2□□□□□ -1.9
NEDD4-208ENST00000508342 ITIH5Q86UX2 942 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 ACRBPQ8NEB7 543 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.2□□□□□ -1.9
NEDD4-208ENST00000508342 IL17RAQ96F46 866 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 MFSD14AQ96MC6 490 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 ZNF512Q96ME7 567 aaPredicted RBP3.2□□□□□ -1.9
NEDD4-208ENST00000508342 TMEM47Q9BQJ4 181 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 RHOXF2Q9BQY4 288 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 CRACR2AQ9BSW2 395 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 SEZ6LQ9BYH1 1024 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 UBN1Q9NPG3 1134 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 DYRK4Q9NR20 520 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 EMILIN3Q9NT22 766 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 TBC1D22BQ9NU19 505 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 SPATA6Q9NWH7 488 aaPredicted RBP3.2□□□□□ -1.9
NEDD4-208ENST00000508342 MTMR4Q9NYA4 1195 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 NYAP2Q9P242 653 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 KANSL3Q9P2N6 904 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 RBBP6Q7Z6E9 1792 aaKnown RBP3.2□□□□□ -1.9
NEDD4-208ENST00000508342 VWA3AA6NCI4 1184 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 NEMP1O14524 444 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 CCL16O15467 120 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 GHRP10912 638 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 SCG2P13521 617 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 GPC3P51654 580 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 SARNPP82979 210 aaKnown RBP3.2□□□□□ -1.9
NEDD4-208ENST00000508342 CYP27A1Q02318 531 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 CTTNQ14247 550 aaKnown RBP3.2□□□□□ -1.9
NEDD4-208ENST00000508342 KYAT1Q16773 422 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 ACBD5Q5T8D3 534 aaPredicted RBP3.2□□□□□ -1.9
NEDD4-208ENST00000508342 C20orf194Q5TEA3 1177 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 PDZD4Q76G19 769 aaPredicted RBP3.2□□□□□ -1.9
NEDD4-208ENST00000508342 SPC24Q8NBT2 197 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 STKLD1Q8NE28 680 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 EAF2Q96CJ1 260 aaPredicted RBP3.2□□□□□ -1.9
NEDD4-208ENST00000508342 CHMP6Q96FZ7 201 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 TRMT13Q9NUP7 481 aaKnown RBP3.2□□□□□ -1.9
NEDD4-208ENST00000508342 USP25Q9UHP3 1055 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 A0A1B0GUL6 1792 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 WDR64B1ANS9 1081 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 F8W8V4 182 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 PSMA7O14818 248 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 ATP2C2O75185 946 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 AFMP43652 599 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 FBXW4P57775 412 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 MGAT5BQ3V5L5 792 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 ZNF484Q5JVG2 852 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 NOTUMQ6P988 496 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 PRR23CQ6ZRP0 262 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 FERMT3Q86UX7 667 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 CERS5Q8N5B7 392 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 EFCAB3Q8N7B9 438 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 ZNF333Q96JL9 665 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 SLC9A7Q96T83 725 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 MKNK1Q9BUB5 465 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 CA14Q9ULX7 337 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 NDRG2Q9UN36 371 aaKnown RBP3.2□□□□□ -1.9
NEDD4-208ENST00000508342 TMX2Q9Y320 296 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 FARP1Q9Y4F1 1045 aaPredicted RBP3.2□□□□□ -1.9
NEDD4-208ENST00000508342 CDY2AQ9Y6F7 541 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 MEI4A8MW99 385 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 MEIS1O00470 390 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 MAGEB2O15479 319 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 HBP1O60381 514 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 CYBBP04839 570 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 CYP2C18P33260 490 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 IFNAR2P48551 515 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 DMWDQ09019 674 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 NEK8Q86SG6 692 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 GPBP1Q86WP2 473 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 SCFD1Q8WVM8 642 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 KCNB2Q92953 911 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 ACAP3Q96P50 834 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 POLR3CQ9BUI4 534 aaPredicted RBP3.2□□□□□ -1.9
NEDD4-208ENST00000508342 CWC15Q9P013 229 aaKnown RBP3.2□□□□□ -1.9
NEDD4-208ENST00000508342 ENPP3O14638 875 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 B4GALT4O60513 344 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 ZNF16P17020 682 aaPredicted RBP3.2□□□□□ -1.9
NEDD4-208ENST00000508342 CTHP32929 405 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 SFSWAPQ12872 951 aaKnown RBP3.2□□□□□ -1.9
NEDD4-208ENST00000508342 AP3B2Q13367 1082 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 PPP1R18Q6NYC8 613 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 SLC30A10Q6XR72 485 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 LEKR1Q6ZMV7 388 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms