RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 CYP4A11Q02928 519 aa14.55□□□□□ -0.08
HMGCS1-205ENST00000508319 EMC2Q15006 297 aa14.55□□□□□ -0.08
HMGCS1-205ENST00000508319 CATSPER4Q7RTX7 472 aa14.55□□□□□ -0.08
HMGCS1-205ENST00000508319 LPPQ93052 612 aa14.55□□□□□ -0.08
HMGCS1-205ENST00000508319 DYDC2Q96IM9 177 aa14.55□□□□□ -0.08
HMGCS1-205ENST00000508319 MINDY3Q9H8M7 445 aa14.55□□□□□ -0.08
HMGCS1-205ENST00000508319 BRMS1Q9HCU9 246 aa14.55□□□□□ -0.08
HMGCS1-205ENST00000508319 ENTPD7Q9NQZ7 604 aa14.55□□□□□ -0.08
HMGCS1-205ENST00000508319 BMP2KQ9NSY1 1161 aaPredicted RBP14.55□□□□□ -0.08
HMGCS1-205ENST00000508319 AGPAT5Q9NUQ2 364 aa14.55□□□□□ -0.08
HMGCS1-205ENST00000508319 SPG21Q9NZD8 308 aa14.55□□□□□ -0.08
HMGCS1-205ENST00000508319 HCN4Q9Y3Q4 1203 aa14.55□□□□□ -0.08
HMGCS1-205ENST00000508319 USP15Q9Y4E8 981 aaPredicted RBP14.55□□□□□ -0.08
HMGCS1-205ENST00000508319 ZNF318Q5VUA4 2279 aa14.55□□□□□ -0.08
HMGCS1-205ENST00000508319 WDFY4Q6ZS81 3184 aa14.55□□□□□ -0.08
HMGCS1-205ENST00000508319 TECTAO75443 2155 aa14.54□□□□□ -0.08
HMGCS1-205ENST00000508319 MEIS3P2A8K0S8 358 aa14.54□□□□□ -0.08
HMGCS1-205ENST00000508319 MARCH6O60337 910 aa14.54□□□□□ -0.08
HMGCS1-205ENST00000508319 SEC24BO95487 1268 aa14.54□□□□□ -0.08
HMGCS1-205ENST00000508319 NEK4P51957 841 aa14.54□□□□□ -0.08
HMGCS1-205ENST00000508319 CTTNQ14247 550 aaKnown RBP14.54□□□□□ -0.08
HMGCS1-205ENST00000508319 DIS3L2Q8IYB7 885 aaKnown RBP14.54□□□□□ -0.08
HMGCS1-205ENST00000508319 PSPC1Q8WXF1 523 aaKnown RBP14.54□□□□□ -0.08
HMGCS1-205ENST00000508319 RSPH1Q8WYR4 309 aa14.54□□□□□ -0.08
HMGCS1-205ENST00000508319 TMEM143Q96AN5 459 aa14.54□□□□□ -0.08
HMGCS1-205ENST00000508319 NGRNQ9NPE2 291 aaKnown RBP14.54□□□□□ -0.08
HMGCS1-205ENST00000508319 FAM105AQ9NUU6 356 aa14.54□□□□□ -0.08
HMGCS1-205ENST00000508319 PUF60Q9UHX1 559 aaKnown RBP14.54□□□□□ -0.08
HMGCS1-205ENST00000508319 MUTYHQ9UIF7 546 aa14.54□□□□□ -0.08
HMGCS1-205ENST00000508319 BTBD18B2RXH4 712 aa14.53□□□□□ -0.08
HMGCS1-205ENST00000508319 ZBTB39O15060 712 aa14.53□□□□□ -0.08
HMGCS1-205ENST00000508319 ZNF623O75123 536 aa14.53□□□□□ -0.08
HMGCS1-205ENST00000508319 RAB27AP51159 221 aa14.53□□□□□ -0.08
HMGCS1-205ENST00000508319 FOSBP53539 338 aa14.53□□□□□ -0.08
HMGCS1-205ENST00000508319 BCAR1P56945 870 aa14.53□□□□□ -0.08
HMGCS1-205ENST00000508319 KRT17Q04695 432 aa14.53□□□□□ -0.08
HMGCS1-205ENST00000508319 LAMTOR4Q0VGL1 99 aa14.53□□□□□ -0.08
HMGCS1-205ENST00000508319 LONRF3Q496Y0 759 aa14.53□□□□□ -0.08
HMGCS1-205ENST00000508319 TMEM184AQ6ZMB5 413 aa14.53□□□□□ -0.08
HMGCS1-205ENST00000508319 FERMT3Q86UX7 667 aa14.53□□□□□ -0.08
HMGCS1-205ENST00000508319 TMEM173Q86WV6 379 aaPredicted RBP14.53□□□□□ -0.08
HMGCS1-205ENST00000508319 RNF135Q8IUD6 432 aa14.53□□□□□ -0.08
HMGCS1-205ENST00000508319 EXOC8Q8IYI6 725 aa14.53□□□□□ -0.08
HMGCS1-205ENST00000508319 PRPF31Q8WWY3 499 aaKnown RBP14.53□□□□□ -0.08
HMGCS1-205ENST00000508319 SUSD6Q92537 303 aa14.53□□□□□ -0.08
HMGCS1-205ENST00000508319 ZSWIM4Q9H7M6 989 aa14.53□□□□□ -0.08
HMGCS1-205ENST00000508319 XPNPEP1Q9NQW7 623 aa14.53□□□□□ -0.08
HMGCS1-205ENST00000508319 TBC1D13Q9NVG8 400 aa14.53□□□□□ -0.08
HMGCS1-205ENST00000508319 ARIH1Q9Y4X5 557 aaPredicted RBP14.53□□□□□ -0.08
HMGCS1-205ENST00000508319 PIEZO1Q92508 2521 aa14.52□□□□□ -0.08
HMGCS1-205ENST00000508319 LOC730098B7Z3J9 87 aa14.52□□□□□ -0.09
HMGCS1-205ENST00000508319 NT5C1B-RDH14C9J2C7 533 aa14.52□□□□□ -0.09
HMGCS1-205ENST00000508319 GAS2O43903 313 aaKnown RBP14.52□□□□□ -0.09
HMGCS1-205ENST00000508319 B4GALT3O60512 393 aa14.52□□□□□ -0.09
HMGCS1-205ENST00000508319 NEMFO60524 1076 aa14.52□□□□□ -0.09
HMGCS1-205ENST00000508319 ZC3H11AO75152 810 aaKnown RBP eCLIP14.52□□□□□ -0.09
HMGCS1-205ENST00000508319 SLITRK3O94933 977 aa14.52□□□□□ -0.09
HMGCS1-205ENST00000508319 BAG4O95429 457 aaKnown RBP14.52□□□□□ -0.09
HMGCS1-205ENST00000508319 SKIP12755 728 aa14.52□□□□□ -0.09
HMGCS1-205ENST00000508319 HOXA11P31270 313 aaPredicted RBP14.52□□□□□ -0.09
HMGCS1-205ENST00000508319 ALDH7A1P49419 539 aaKnown RBP14.52□□□□□ -0.09
HMGCS1-205ENST00000508319 CALCRLQ16602 461 aa14.52□□□□□ -0.09
HMGCS1-205ENST00000508319 XKR9Q5GH70 373 aa14.52□□□□□ -0.09
HMGCS1-205ENST00000508319 HERC4Q5GLZ8 1057 aaPredicted RBP14.52□□□□□ -0.09
HMGCS1-205ENST00000508319 GLB1LQ6UWU2 654 aa14.52□□□□□ -0.09
HMGCS1-205ENST00000508319 TMC7Q7Z402 723 aa14.52□□□□□ -0.09
HMGCS1-205ENST00000508319 SRGAP1Q7Z6B7 1085 aa14.52□□□□□ -0.09
HMGCS1-205ENST00000508319 RNF149Q8NC42 400 aa14.52□□□□□ -0.09
HMGCS1-205ENST00000508319 MTRQ99707 1265 aa14.52□□□□□ -0.09
HMGCS1-205ENST00000508319 HSD17B14Q9BPX1 270 aa14.52□□□□□ -0.09
HMGCS1-205ENST00000508319 EIF2AK1Q9BQI3 630 aaKnown RBP14.52□□□□□ -0.09
HMGCS1-205ENST00000508319 PCDHB2Q9Y5E7 798 aa14.52□□□□□ -0.09
HMGCS1-205ENST00000508319 C2orf71A6NGG8 1288 aa14.51□□□□□ -0.09
HMGCS1-205ENST00000508319 OFD1O75665 1012 aa14.51□□□□□ -0.09
HMGCS1-205ENST00000508319 LYPLA2O95372 231 aa14.51□□□□□ -0.09
HMGCS1-205ENST00000508319 SRGAP2CP0DJJ0 459 aa14.51□□□□□ -0.09
HMGCS1-205ENST00000508319 SRGAP2BP0DMP2 458 aa14.51□□□□□ -0.09
HMGCS1-205ENST00000508319 TECP42680 631 aa14.51□□□□□ -0.09
HMGCS1-205ENST00000508319 SMC1AQ14683 1233 aaKnown RBP14.51□□□□□ -0.09
HMGCS1-205ENST00000508319 CBX2Q14781 532 aaPredicted RBP14.51□□□□□ -0.09
HMGCS1-205ENST00000508319 NOMO2Q5JPE7 1267 aa14.51□□□□□ -0.09
HMGCS1-205ENST00000508319 UBXN11Q5T124 520 aa14.51□□□□□ -0.09
HMGCS1-205ENST00000508319 ANKRD54Q6NXT1 300 aa14.51□□□□□ -0.09
HMGCS1-205ENST00000508319 LLGL2Q6P1M3 1020 aa14.51□□□□□ -0.09
HMGCS1-205ENST00000508319 SYCE2Q6PIF2 218 aa14.51□□□□□ -0.09
HMGCS1-205ENST00000508319 AGMOQ6ZNB7 445 aa14.51□□□□□ -0.09
HMGCS1-205ENST00000508319 OTUD6AQ7L8S5 288 aa14.51□□□□□ -0.09
HMGCS1-205ENST00000508319 TPH2Q8IWU9 490 aa14.51□□□□□ -0.09
HMGCS1-205ENST00000508319 BCL7CQ8WUZ0 217 aaPredicted RBP14.51□□□□□ -0.09
HMGCS1-205ENST00000508319 TCP11Q8WWU5 503 aa14.51□□□□□ -0.09
HMGCS1-205ENST00000508319 FAM122AQ96E09 287 aa14.51□□□□□ -0.09
HMGCS1-205ENST00000508319 MTMR9Q96QG7 549 aa14.51□□□□□ -0.09
HMGCS1-205ENST00000508319 PHF7Q9BWX1 381 aaPredicted RBP14.51□□□□□ -0.09
HMGCS1-205ENST00000508319 ZBP1Q9H171 429 aa14.51□□□□□ -0.09
HMGCS1-205ENST00000508319 S1PR5Q9H228 398 aa14.51□□□□□ -0.09
HMGCS1-205ENST00000508319 NRDE2Q9H7Z3 1164 aa14.51□□□□□ -0.09
HMGCS1-205ENST00000508319 TTC12Q9H892 705 aaPredicted RBP14.51□□□□□ -0.09
HMGCS1-205ENST00000508319 PCDHA12Q9UN75 941 aa14.51□□□□□ -0.09
HMGCS1-205ENST00000508319 INPP5FQ9Y2H2 1132 aa14.51□□□□□ -0.09
HMGCS1-205ENST00000508319 HCFC2Q9Y5Z7 792 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms