RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 HSCBQ8IWL3 235 aa22.05■■□□□ 1.12
SFXN1-209ENST00000508290 KIFAP3Q92845 792 aa22.05■■□□□ 1.12
SFXN1-209ENST00000508290 PRIMPOLQ96LW4 560 aa22.05■■□□□ 1.12
SFXN1-209ENST00000508290 C2orf40Q9H1Z8 148 aa22.05■■□□□ 1.12
SFXN1-209ENST00000508290 MYO9BQ13459 2157 aa22.04■■□□□ 1.12
SFXN1-209ENST00000508290 RBAK-RBAKDNI3L0D1 243 aa22.04■■□□□ 1.12
SFXN1-209ENST00000508290 INO80B-WBP1J3KQ70 363 aa22.04■■□□□ 1.12
SFXN1-209ENST00000508290 NCK2O43639 380 aa22.04■■□□□ 1.12
SFXN1-209ENST00000508290 FGFR1P11362 822 aa22.04■■□□□ 1.12
SFXN1-209ENST00000508290 SYT1P21579 422 aa22.04■■□□□ 1.12
SFXN1-209ENST00000508290 IBSPP21815 317 aaPredicted RBP22.04■■□□□ 1.12
SFXN1-209ENST00000508290 HYIQ5T013 277 aa22.04■■□□□ 1.12
SFXN1-209ENST00000508290 SPOUT1Q5T280 376 aaKnown RBP22.04■■□□□ 1.12
SFXN1-209ENST00000508290 NOTUMQ6P988 496 aa22.04■■□□□ 1.12
SFXN1-209ENST00000508290 ZBTB8OSQ8IWT0 167 aa22.04■■□□□ 1.12
SFXN1-209ENST00000508290 SYMPKQ92797 1274 aaKnown RBP22.04■■□□□ 1.12
SFXN1-209ENST00000508290 PPP2R3CQ969Q6 453 aa22.04■■□□□ 1.12
SFXN1-209ENST00000508290 BHMT2Q9H2M3 363 aa22.04■■□□□ 1.12
SFXN1-209ENST00000508290 DDX19AQ9NUU7 478 aaKnown RBP22.04■■□□□ 1.12
SFXN1-209ENST00000508290 CNTNAP2Q9UHC6 1331 aa22.04■■□□□ 1.12
SFXN1-209ENST00000508290 EYA4O95677 639 aa22.03■■□□□ 1.12
SFXN1-209ENST00000508290 PPM1AP35813 382 aa22.03■■□□□ 1.12
SFXN1-209ENST00000508290 NAMPTP43490 491 aa22.03■■□□□ 1.12
SFXN1-209ENST00000508290 MRPS5P82675 430 aaKnown RBP22.03■■□□□ 1.12
SFXN1-209ENST00000508290 GLB1LQ6UWU2 654 aa22.03■■□□□ 1.12
SFXN1-209ENST00000508290 HACE1Q8IYU2 909 aa22.03■■□□□ 1.12
SFXN1-209ENST00000508290 RNF169Q8NCN4 708 aa22.03■■□□□ 1.12
SFXN1-209ENST00000508290 ASAP3Q8TDY4 903 aa22.03■■□□□ 1.12
SFXN1-209ENST00000508290 CASD1Q96PB1 797 aa22.03■■□□□ 1.12
SFXN1-209ENST00000508290 TIPINQ9BVW5 301 aa22.03■■□□□ 1.12
SFXN1-209ENST00000508290 ZSCAN16Q9H4T2 348 aaPredicted RBP22.03■■□□□ 1.12
SFXN1-209ENST00000508290 NSUN3Q9H649 340 aaKnown RBP22.03■■□□□ 1.12
SFXN1-209ENST00000508290 MINDY3Q9H8M7 445 aa22.03■■□□□ 1.12
SFXN1-209ENST00000508290 UBN1Q9NPG3 1134 aa22.03■■□□□ 1.12
SFXN1-209ENST00000508290 KCNG1Q9UIX4 513 aa22.03■■□□□ 1.12
SFXN1-209ENST00000508290 PLAGL2Q9UPG8 496 aa22.03■■□□□ 1.12
SFXN1-209ENST00000508290 PHLPP2Q6ZVD8 1323 aa22.03■■□□□ 1.12
SFXN1-209ENST00000508290 VWA3AA6NCI4 1184 aa22.02■■□□□ 1.12
SFXN1-209ENST00000508290 ATF7P17544 494 aaPredicted RBP22.02■■□□□ 1.12
SFXN1-209ENST00000508290 HOXA11P31270 313 aaPredicted RBP22.02■■□□□ 1.12
SFXN1-209ENST00000508290 GATMP50440 423 aa22.02■■□□□ 1.12
SFXN1-209ENST00000508290 MBTD1Q05BQ5 628 aa22.02■■□□□ 1.12
SFXN1-209ENST00000508290 IL17AQ16552 155 aa22.02■■□□□ 1.12
SFXN1-209ENST00000508290 TJAP1Q5JTD0 557 aa22.02■■□□□ 1.12
SFXN1-209ENST00000508290 CDCA2Q69YH5 1023 aaPredicted RBP22.02■■□□□ 1.12
SFXN1-209ENST00000508290 HLA-CQ95604 372 aa22.02■■□□□ 1.12
SFXN1-209ENST00000508290 CDK5RAP3Q96JB5 506 aa22.02■■□□□ 1.12
SFXN1-209ENST00000508290 IFT74Q96LB3 600 aa22.02■■□□□ 1.12
SFXN1-209ENST00000508290 TYW1Q9NV66 732 aaKnown RBP22.02■■□□□ 1.12
SFXN1-209ENST00000508290 PRMT7Q9NVM4 692 aaPredicted RBP22.02■■□□□ 1.12
SFXN1-209ENST00000508290 PCDHB2Q9Y5E7 798 aa22.02■■□□□ 1.12
SFXN1-209ENST00000508290 LRRIQ4A6NIV6 560 aa22.01■■□□□ 1.11
SFXN1-209ENST00000508290 TSPAN1O60635 241 aa22.01■■□□□ 1.11
SFXN1-209ENST00000508290 LONP1P36776 959 aaKnown RBP22.01■■□□□ 1.11
SFXN1-209ENST00000508290 CLLU1OSQ5K130 101 aa22.01■■□□□ 1.11
SFXN1-209ENST00000508290 PDE12Q6L8Q7 609 aaKnown RBP22.01■■□□□ 1.11
SFXN1-209ENST00000508290 PPP4R3CPQ6ZMV5 832 aa22.01■■□□□ 1.11
SFXN1-209ENST00000508290 MRPL10Q7Z7H8 261 aaKnown RBP22.01■■□□□ 1.11
SFXN1-209ENST00000508290 KLHL23Q8NBE8 558 aa22.01■■□□□ 1.11
SFXN1-209ENST00000508290 C17orf75Q9HAS0 396 aa22.01■■□□□ 1.11
SFXN1-209ENST00000508290 RNF19AQ9NV58 838 aa22.01■■□□□ 1.11
SFXN1-209ENST00000508290 KCND2Q9NZV8 630 aa22.01■■□□□ 1.11
SFXN1-209ENST00000508290 LZTS1Q9Y250 596 aa22.01■■□□□ 1.11
SFXN1-209ENST00000508290 NLRC5Q86WI3 1866 aa22■■□□□ 1.11
SFXN1-209ENST00000508290 A0A087WWV3 80 aa22■■□□□ 1.11
SFXN1-209ENST00000508290 FSD2A1L4K1 749 aa22■■□□□ 1.11
SFXN1-209ENST00000508290 GRM6O15303 877 aa22■■□□□ 1.11
SFXN1-209ENST00000508290 HSP90AA1P07900 732 aaKnown RBP22■■□□□ 1.11
SFXN1-209ENST00000508290 EFNA5P52803 228 aa22■■□□□ 1.11
SFXN1-209ENST00000508290 ECM1Q16610 540 aa22■■□□□ 1.11
SFXN1-209ENST00000508290 FAM187BQ17R55 369 aa22■■□□□ 1.11
SFXN1-209ENST00000508290 COLGALT1Q8NBJ5 622 aa22■■□□□ 1.11
SFXN1-209ENST00000508290 DRC1Q96MC2 740 aa22■■□□□ 1.11
SFXN1-209ENST00000508290 ZNF558Q96NG5 402 aa22■■□□□ 1.11
SFXN1-209ENST00000508290 ASB2Q96Q27 587 aa22■■□□□ 1.11
SFXN1-209ENST00000508290 CWH43Q9H720 699 aa22■■□□□ 1.11
SFXN1-209ENST00000508290 GPRC5CQ9NQ84 441 aa22■■□□□ 1.11
SFXN1-209ENST00000508290 PUF60Q9UHX1 559 aaKnown RBP22■■□□□ 1.11
SFXN1-209ENST00000508290 MORC2Q9Y6X9 1032 aaPredicted RBP22■■□□□ 1.11
SFXN1-209ENST00000508290 PRRC2BQ5JSZ5 2229 aaKnown RBP22■■□□□ 1.11
SFXN1-209ENST00000508290 EYSQ5T1H1 3165 aa21.99■■□□□ 1.11
SFXN1-209ENST00000508290 PP2D1A8MPX8 630 aa21.99■■□□□ 1.11
SFXN1-209ENST00000508290 STX6O43752 255 aa21.99■■□□□ 1.11
SFXN1-209ENST00000508290 ITGB1P05556 798 aa21.99■■□□□ 1.11
SFXN1-209ENST00000508290 NCLP19338 710 aaKnown RBP21.99■■□□□ 1.11
SFXN1-209ENST00000508290 UBA7P41226 1012 aa21.99■■□□□ 1.11
SFXN1-209ENST00000508290 PLCB3Q01970 1234 aa21.99■■□□□ 1.11
SFXN1-209ENST00000508290 SF3A1Q15459 793 aaKnown RBP21.99■■□□□ 1.11
SFXN1-209ENST00000508290 MAPK6Q16659 721 aa21.99■■□□□ 1.11
SFXN1-209ENST00000508290 MAEAQ7L5Y9 396 aa21.99■■□□□ 1.11
SFXN1-209ENST00000508290 THNSL1Q8IYQ7 743 aa21.99■■□□□ 1.11
SFXN1-209ENST00000508290 DEPTORQ8TB45 409 aa21.99■■□□□ 1.11
SFXN1-209ENST00000508290 SPPL3Q8TCT6 385 aa21.99■■□□□ 1.11
SFXN1-209ENST00000508290 URGCPQ8TCY9 931 aa21.99■■□□□ 1.11
SFXN1-209ENST00000508290 HELQQ8TDG4 1101 aa21.99■■□□□ 1.11
SFXN1-209ENST00000508290 CALML4Q96GE6 196 aa21.99■■□□□ 1.11
SFXN1-209ENST00000508290 MMTAG2Q9BU76 263 aaKnown RBP21.99■■□□□ 1.11
SFXN1-209ENST00000508290 CSRNP2Q9H175 543 aa21.99■■□□□ 1.11
SFXN1-209ENST00000508290 KANSL3Q9P2N6 904 aa21.99■■□□□ 1.11
SFXN1-209ENST00000508290 STK39Q9UEW8 545 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms