RNA–Protein interactions for RNA: ENST00000507638.1

VEGFC-201, Transcript of vascular endothelial growth factor C, humanhuman

TSL 3

Gene VEGFC, Length 759 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-201ENST00000507638 ZHX1Q9UKY1 873 aaPredicted RBP6.6□□□□□ -1.35
VEGFC-201ENST00000507638 MAP3K2Q9Y2U5 619 aa6.6□□□□□ -1.35
VEGFC-201ENST00000507638 INSL6Q9Y581 213 aa6.6□□□□□ -1.35
VEGFC-201ENST00000507638 MYH2Q9UKX2 1941 aa6.6□□□□□ -1.35
VEGFC-201ENST00000507638 NLRC5Q86WI3 1866 aa6.6□□□□□ -1.35
VEGFC-201ENST00000507638 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.59□□□□□ -1.35
VEGFC-201ENST00000507638 ENC1O14682 589 aa6.59□□□□□ -1.35
VEGFC-201ENST00000507638 ZNF500O60304 480 aaPredicted RBP6.59□□□□□ -1.35
VEGFC-201ENST00000507638 KINO60870 393 aaKnown RBP6.59□□□□□ -1.35
VEGFC-201ENST00000507638 CABYRO75952 493 aa6.59□□□□□ -1.35
VEGFC-201ENST00000507638 CSPG5O95196 566 aa6.59□□□□□ -1.35
VEGFC-201ENST00000507638 SNAI1O95863 264 aaPredicted RBP6.59□□□□□ -1.35
VEGFC-201ENST00000507638 ASNSP08243 561 aa6.59□□□□□ -1.35
VEGFC-201ENST00000507638 SUPT20HL2P0C7V6 817 aa6.59□□□□□ -1.35
VEGFC-201ENST00000507638 PRDX5P30044 214 aa6.59□□□□□ -1.35
VEGFC-201ENST00000507638 ASPAP45381 313 aa6.59□□□□□ -1.35
VEGFC-201ENST00000507638 ZNF252P-AS1Q0IIN9 211 aa6.59□□□□□ -1.35
VEGFC-201ENST00000507638 KLHL40Q2TBA0 621 aa6.59□□□□□ -1.35
VEGFC-201ENST00000507638 ZNF792Q3KQV3 632 aa6.59□□□□□ -1.35
VEGFC-201ENST00000507638 LLGL2Q6P1M3 1020 aa6.59□□□□□ -1.35
VEGFC-201ENST00000507638 SKAP1Q86WV1 359 aa6.59□□□□□ -1.35
VEGFC-201ENST00000507638 TRIM42Q8IWZ5 723 aa6.59□□□□□ -1.35
VEGFC-201ENST00000507638 SMAP1Q8IYB5 467 aaPredicted RBP6.59□□□□□ -1.35
VEGFC-201ENST00000507638 KCNB2Q92953 911 aa6.59□□□□□ -1.35
VEGFC-201ENST00000507638 SECISBP2LQ93073 1101 aaKnown RBP6.59□□□□□ -1.35
VEGFC-201ENST00000507638 SEZ6LQ9BYH1 1024 aa6.59□□□□□ -1.35
VEGFC-201ENST00000507638 ALDH8A1Q9H2A2 487 aaPredicted RBP6.59□□□□□ -1.35
VEGFC-201ENST00000507638 MROH8Q9H579 483 aa6.59□□□□□ -1.35
VEGFC-201ENST00000507638 CCDC86Q9H6F5 360 aaKnown RBP6.59□□□□□ -1.35
VEGFC-201ENST00000507638 PIDD1Q9HB75 910 aa6.59□□□□□ -1.35
VEGFC-201ENST00000507638 CACNA2D2Q9NY47 1150 aa6.59□□□□□ -1.35
VEGFC-201ENST00000507638 PARP2Q9UGN5 583 aa6.59□□□□□ -1.35
VEGFC-201ENST00000507638 AP4E1Q9UPM8 1137 aa6.59□□□□□ -1.35
VEGFC-201ENST00000507638 IL16Q14005 1332 aa6.58□□□□□ -1.36
VEGFC-201ENST00000507638 KRTAP9-6A0A140TA67 174 aa6.58□□□□□ -1.36
VEGFC-201ENST00000507638 RBAK-RBAKDNI3L0D1 243 aa6.58□□□□□ -1.36
VEGFC-201ENST00000507638 SORBS3O60504 671 aa6.58□□□□□ -1.36
VEGFC-201ENST00000507638 ATF7P17544 494 aaPredicted RBP6.58□□□□□ -1.36
VEGFC-201ENST00000507638 MFAP1P55081 439 aaKnown RBP6.58□□□□□ -1.36
VEGFC-201ENST00000507638 ZNF445P59923 1031 aa6.58□□□□□ -1.36
VEGFC-201ENST00000507638 HMGN5P82970 282 aaKnown RBP6.58□□□□□ -1.36
VEGFC-201ENST00000507638 LRP8Q14114 963 aa6.58□□□□□ -1.36
VEGFC-201ENST00000507638 TAF7LQ5H9L4 462 aa6.58□□□□□ -1.36
VEGFC-201ENST00000507638 C19orf48Q6RUI8 117 aa6.58□□□□□ -1.36
VEGFC-201ENST00000507638 DYMQ7RTS9 669 aa6.58□□□□□ -1.36
VEGFC-201ENST00000507638 KCT2Q8NC54 265 aa6.58□□□□□ -1.36
VEGFC-201ENST00000507638 WDR66Q8TBY9 1149 aa6.58□□□□□ -1.36
VEGFC-201ENST00000507638 NETO1Q8TDF5 533 aa6.58□□□□□ -1.36
VEGFC-201ENST00000507638 PANK1Q8TE04 598 aa6.58□□□□□ -1.36
VEGFC-201ENST00000507638 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.58□□□□□ -1.36
VEGFC-201ENST00000507638 CRELD1Q96HD1 420 aa6.58□□□□□ -1.36
VEGFC-201ENST00000507638 MMP19Q99542 508 aa6.58□□□□□ -1.36
VEGFC-201ENST00000507638 ACSS3Q9H6R3 686 aa6.58□□□□□ -1.36
VEGFC-201ENST00000507638 PARD6AQ9NPB6 346 aa6.58□□□□□ -1.36
VEGFC-201ENST00000507638 CRIM1Q9NZV1 1036 aa6.58□□□□□ -1.36
VEGFC-201ENST00000507638 CCDC39Q9UFE4 941 aa6.58□□□□□ -1.36
VEGFC-201ENST00000507638 DIS3Q9Y2L1 958 aaKnown RBP6.58□□□□□ -1.36
VEGFC-201ENST00000507638 ACTL7BQ9Y614 415 aa6.58□□□□□ -1.36
VEGFC-201ENST00000507638 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.58□□□□□ -1.36
VEGFC-201ENST00000507638 RALGAPA1Q6GYQ0 2036 aa6.58□□□□□ -1.36
VEGFC-201ENST00000507638 IGF2RP11717 2491 aa6.57□□□□□ -1.36
VEGFC-201ENST00000507638 SALL1Q9NSC2 1324 aa6.57□□□□□ -1.36
VEGFC-201ENST00000507638 MCM3APO60318 1980 aa6.57□□□□□ -1.36
VEGFC-201ENST00000507638 LOC400499M0QZD8 3231 aa6.57□□□□□ -1.36
VEGFC-201ENST00000507638 HMX2A2RU54 273 aa6.57□□□□□ -1.36
VEGFC-201ENST00000507638 TMEM8BA6NDV4 472 aa6.57□□□□□ -1.36
VEGFC-201ENST00000507638 GRM6O15303 877 aa6.57□□□□□ -1.36
VEGFC-201ENST00000507638 DDX58O95786 925 aaKnown RBP6.57□□□□□ -1.36
VEGFC-201ENST00000507638 DRD2P14416 443 aa6.57□□□□□ -1.36
VEGFC-201ENST00000507638 ITGB7P26010 798 aa6.57□□□□□ -1.36
VEGFC-201ENST00000507638 DDIT3P35638 169 aa6.57□□□□□ -1.36
VEGFC-201ENST00000507638 CASP7P55210 303 aa6.57□□□□□ -1.36
VEGFC-201ENST00000507638 ACVR2BQ13705 512 aa6.57□□□□□ -1.36
VEGFC-201ENST00000507638 GPNMBQ14956 572 aa6.57□□□□□ -1.36
VEGFC-201ENST00000507638 TCTN1Q2MV58 587 aa6.57□□□□□ -1.36
VEGFC-201ENST00000507638 CCDC144BQ3MJ40 725 aa6.57□□□□□ -1.36
VEGFC-201ENST00000507638 SGO2Q562F6 1265 aa6.57□□□□□ -1.36
VEGFC-201ENST00000507638 CCDC146Q8IYE0 955 aa6.57□□□□□ -1.36
VEGFC-201ENST00000507638 SPATA18Q8TC71 538 aa6.57□□□□□ -1.36
VEGFC-201ENST00000507638 TNPO1Q92973 898 aaKnown RBP6.57□□□□□ -1.36
VEGFC-201ENST00000507638 C12orf42Q96LP6 360 aa6.57□□□□□ -1.36
VEGFC-201ENST00000507638 PANK2Q9BZ23 570 aa6.57□□□□□ -1.36
VEGFC-201ENST00000507638 PUS3Q9BZE2 481 aaKnown RBP6.57□□□□□ -1.36
VEGFC-201ENST00000507638 RPAP3Q9H6T3 665 aaPredicted RBP6.57□□□□□ -1.36
VEGFC-201ENST00000507638 CBX8Q9HC52 389 aa6.57□□□□□ -1.36
VEGFC-201ENST00000507638 HOXC10Q9NYD6 342 aa6.57□□□□□ -1.36
VEGFC-201ENST00000507638 BARX2Q9UMQ3 279 aaPredicted RBP6.57□□□□□ -1.36
VEGFC-201ENST00000507638 NOL7Q9UMY1 257 aaKnown RBP6.57□□□□□ -1.36
VEGFC-201ENST00000507638 DDX49Q9Y6V7 483 aaKnown RBP6.57□□□□□ -1.36
VEGFC-201ENST00000507638 CEP295Q9C0D2 2601 aa6.57□□□□□ -1.36
VEGFC-201ENST00000507638 ASXL3Q9C0F0 2248 aa6.56□□□□□ -1.36
VEGFC-201ENST00000507638 MICAL3Q7RTP6 2002 aa6.56□□□□□ -1.36
VEGFC-201ENST00000507638 ABHD14A-ACY1A0A1B0GW23 586 aa6.56□□□□□ -1.36
VEGFC-201ENST00000507638 SCO2A0A1W2PP80 73 aa6.56□□□□□ -1.36
VEGFC-201ENST00000507638 PI4KAP2A4QPH2 592 aa6.56□□□□□ -1.36
VEGFC-201ENST00000507638 TMPRSS2O15393 492 aa6.56□□□□□ -1.36
VEGFC-201ENST00000507638 ARHGAP6O43182 974 aa6.56□□□□□ -1.36
VEGFC-201ENST00000507638 VCAM1P19320 739 aa6.56□□□□□ -1.36
VEGFC-201ENST00000507638 HTRA4P83105 476 aaPredicted RBP6.56□□□□□ -1.36
VEGFC-201ENST00000507638 NEXNQ0ZGT2 675 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms