RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 RWDD3Q9Y3V2 267 aa9.34□□□□□ -0.91
PDGFC-205ENST00000506880 PCDHB13Q9Y5F0 798 aa9.34□□□□□ -0.91
PDGFC-205ENST00000506880 CITO14578 2027 aa9.34□□□□□ -0.91
PDGFC-205ENST00000506880 CNTNAP2Q9UHC6 1331 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 A0A0U1RQF3 1178 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 PP2D1A8MPX8 630 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 E9PMD0 336 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 K7ERI5 159 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 N4BP3O15049 544 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 GTPBP6O43824 516 aaPredicted RBP9.33□□□□□ -0.92
PDGFC-205ENST00000506880 NBNO60934 754 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 HIP1RO75146 1068 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 ZNF202O95125 648 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 SMC2O95347 1197 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 MBD3O95983 291 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 AMHP03971 560 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 KRT18P05783 430 aaKnown RBP9.33□□□□□ -0.92
PDGFC-205ENST00000506880 CSF2RAP15509 400 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 PFKFB1P16118 471 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 CDC25AP30304 524 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 NCKAP1LP55160 1127 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 FAM189BP81408 668 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 SMAD3P84022 425 aaKnown RBP9.33□□□□□ -0.92
PDGFC-205ENST00000506880 GTF2BQ00403 316 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 GRIN1Q05586 938 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 STRN3Q13033 797 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 CAPSQ13938 189 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 GIT2Q14161 759 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 KCNB1Q14721 858 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 POSTNQ15063 836 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 RAB30Q15771 203 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 DCAF4L1Q3SXM0 396 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 COBLL1Q53SF7 1204 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 FAM102BQ5T8I3 360 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 SLFN12LQ6IEE8 588 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 UNC13DQ70J99 1090 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 LRRC71Q8N4P6 559 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 FSIP1Q8NA03 581 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 GOLGA5Q8TBA6 731 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 TRAPPC12Q8WVT3 735 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 DDX12PQ92771 950 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 DNAJC19Q96DA6 116 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 PGBD4Q96DM1 585 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 SAMD11Q96NU1 681 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 GSDMAQ96QA5 445 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 ADPGKQ9BRR6 497 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 PPP1R12CQ9BZL4 782 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 TMEM206Q9H813 350 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 KMT5AQ9NQR1 393 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 RGS18Q9NS28 235 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 TBC1D7Q9P0N9 293 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 PADI3Q9ULW8 664 aa9.33□□□□□ -0.92
PDGFC-205ENST00000506880 RALGAPA2Q2PPJ7 1873 aa9.32□□□□□ -0.92
PDGFC-205ENST00000506880 A0A087WZ62 844 aa9.32□□□□□ -0.92
PDGFC-205ENST00000506880 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.32□□□□□ -0.92
PDGFC-205ENST00000506880 A0A1B0GUA9 196 aa9.32□□□□□ -0.92
PDGFC-205ENST00000506880 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.32□□□□□ -0.92
PDGFC-205ENST00000506880 INPPL1O15357 1258 aa9.32□□□□□ -0.92
PDGFC-205ENST00000506880 ACTN4O43707 911 aaKnown RBP9.32□□□□□ -0.92
PDGFC-205ENST00000506880 TRAK2O60296 914 aa9.32□□□□□ -0.92
PDGFC-205ENST00000506880 KINO60870 393 aaKnown RBP9.32□□□□□ -0.92
PDGFC-205ENST00000506880 VTNP04004 478 aa9.32□□□□□ -0.92
PDGFC-205ENST00000506880 PAX3P23760 479 aa9.32□□□□□ -0.92
PDGFC-205ENST00000506880 NPTX2P47972 431 aa9.32□□□□□ -0.92
PDGFC-205ENST00000506880 SARSP49591 514 aaKnown RBP9.32□□□□□ -0.92
PDGFC-205ENST00000506880 ENPEPQ07075 957 aa9.32□□□□□ -0.92
PDGFC-205ENST00000506880 MAPK7Q13164 816 aa9.32□□□□□ -0.92
PDGFC-205ENST00000506880 MYBPC2Q14324 1141 aa9.32□□□□□ -0.92
PDGFC-205ENST00000506880 MCM6Q14566 821 aa9.32□□□□□ -0.92
PDGFC-205ENST00000506880 DSC3Q14574 896 aa9.32□□□□□ -0.92
PDGFC-205ENST00000506880 MBTPS1Q14703 1052 aa9.32□□□□□ -0.92
PDGFC-205ENST00000506880 KIZQ2M2Z5 673 aa9.32□□□□□ -0.92
PDGFC-205ENST00000506880 ARSHQ5FYA8 562 aa9.32□□□□□ -0.92
PDGFC-205ENST00000506880 CT47A1Q5JQC4 288 aaPredicted RBP9.32□□□□□ -0.92
PDGFC-205ENST00000506880 FOXD4L5Q5VV16 416 aaPredicted RBP9.32□□□□□ -0.92
PDGFC-205ENST00000506880 KRBA2Q6ZNG9 492 aa9.32□□□□□ -0.92
PDGFC-205ENST00000506880 USP49Q70CQ1 688 aa9.32□□□□□ -0.92
PDGFC-205ENST00000506880 CATSPER4Q7RTX7 472 aa9.32□□□□□ -0.92
PDGFC-205ENST00000506880 KCNK18Q7Z418 384 aa9.32□□□□□ -0.92
PDGFC-205ENST00000506880 NPAS4Q8IUM7 802 aa9.32□□□□□ -0.92
PDGFC-205ENST00000506880 FAM178BQ8IXR5 827 aa9.32□□□□□ -0.92
PDGFC-205ENST00000506880 FMR1NBQ8N0W7 255 aaPredicted RBP9.32□□□□□ -0.92
PDGFC-205ENST00000506880 DAW1Q8N136 415 aa9.32□□□□□ -0.92
PDGFC-205ENST00000506880 TRIML1Q8N9V2 468 aa9.32□□□□□ -0.92
PDGFC-205ENST00000506880 ENGASEQ8NFI3 743 aa9.32□□□□□ -0.92
PDGFC-205ENST00000506880 FOXD4L4Q8WXT5 416 aaPredicted RBP9.32□□□□□ -0.92
PDGFC-205ENST00000506880 WNT8BQ93098 351 aa9.32□□□□□ -0.92
PDGFC-205ENST00000506880 TMEM143Q96AN5 459 aa9.32□□□□□ -0.92
PDGFC-205ENST00000506880 UIMC1Q96RL1 719 aa9.32□□□□□ -0.92
PDGFC-205ENST00000506880 REEP2Q9BRK0 252 aa9.32□□□□□ -0.92
PDGFC-205ENST00000506880 FDXACB1Q9BRP7 624 aaPredicted RBP9.32□□□□□ -0.92
PDGFC-205ENST00000506880 RUSC1Q9BVN2 902 aa9.32□□□□□ -0.92
PDGFC-205ENST00000506880 MRPL4Q9BYD3 311 aaKnown RBP9.32□□□□□ -0.92
PDGFC-205ENST00000506880 CCDC113Q9H0I3 377 aa9.32□□□□□ -0.92
PDGFC-205ENST00000506880 TMEM161AQ9NX61 479 aa9.32□□□□□ -0.92
PDGFC-205ENST00000506880 KANSL3Q9P2N6 904 aa9.32□□□□□ -0.92
PDGFC-205ENST00000506880 ST3GAL5Q9UNP4 418 aa9.32□□□□□ -0.92
PDGFC-205ENST00000506880 SLC4A7Q9Y6M7 1214 aa9.32□□□□□ -0.92
PDGFC-205ENST00000506880 MYO9BQ13459 2157 aa9.31□□□□□ -0.92
PDGFC-205ENST00000506880 RANBP2P49792 3224 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms