RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 HIP1RO75146 1068 aa20.2■□□□□ 0.82
PDLIM7-216ENST00000506537 ZSCAN20P17040 1043 aaPredicted RBP20.2■□□□□ 0.82
PDLIM7-216ENST00000506537 ATF7P17544 494 aaPredicted RBP20.2■□□□□ 0.82
PDLIM7-216ENST00000506537 HOXA11P31270 313 aaPredicted RBP20.2■□□□□ 0.82
PDLIM7-216ENST00000506537 KIFAP3Q92845 792 aa20.2■□□□□ 0.82
PDLIM7-216ENST00000506537 CDX2Q99626 313 aaPredicted RBP20.2■□□□□ 0.82
PDLIM7-216ENST00000506537 CERS4Q9HA82 394 aa20.2■□□□□ 0.82
PDLIM7-216ENST00000506537 CHST12Q9NRB3 414 aa20.2■□□□□ 0.82
PDLIM7-216ENST00000506537 RNF19AQ9NV58 838 aa20.2■□□□□ 0.82
PDLIM7-216ENST00000506537 ADGRA3Q8IWK6 1321 aa20.2■□□□□ 0.82
PDLIM7-216ENST00000506537 EYSQ5T1H1 3165 aa20.19■□□□□ 0.82
PDLIM7-216ENST00000506537 A0A087X0B3 334 aa20.19■□□□□ 0.82
PDLIM7-216ENST00000506537 INO80B-WBP1J3KQ70 363 aa20.19■□□□□ 0.82
PDLIM7-216ENST00000506537 TSPAN1O60635 241 aa20.19■□□□□ 0.82
PDLIM7-216ENST00000506537 LINC00271P0C7V0 271 aa20.19■□□□□ 0.82
PDLIM7-216ENST00000506537 STAG3L1P0CL83 205 aa20.19■□□□□ 0.82
PDLIM7-216ENST00000506537 GUCY2CP25092 1073 aa20.19■□□□□ 0.82
PDLIM7-216ENST00000506537 NAMPTP43490 491 aa20.19■□□□□ 0.82
PDLIM7-216ENST00000506537 RAD51AP2Q09MP3 1159 aa20.19■□□□□ 0.82
PDLIM7-216ENST00000506537 MCM6Q14566 821 aa20.19■□□□□ 0.82
PDLIM7-216ENST00000506537 ARSHQ5FYA8 562 aa20.19■□□□□ 0.82
PDLIM7-216ENST00000506537 AXDND1Q5T1B0 1012 aaPredicted RBP20.19■□□□□ 0.82
PDLIM7-216ENST00000506537 ATL3Q6DD88 541 aa20.19■□□□□ 0.82
PDLIM7-216ENST00000506537 ECHDC2Q86YB7 292 aa20.19■□□□□ 0.82
PDLIM7-216ENST00000506537 RASSF8Q8NHQ8 419 aa20.19■□□□□ 0.82
PDLIM7-216ENST00000506537 RAD54LQ92698 747 aa20.19■□□□□ 0.82
PDLIM7-216ENST00000506537 KIFC3Q9BVG8 833 aa20.19■□□□□ 0.82
PDLIM7-216ENST00000506537 PRDM12Q9H4Q4 367 aa20.19■□□□□ 0.82
PDLIM7-216ENST00000506537 TMEM161AQ9NX61 479 aa20.19■□□□□ 0.82
PDLIM7-216ENST00000506537 FNDC1Q4ZHG4 1894 aaPredicted RBP20.19■□□□□ 0.82
PDLIM7-216ENST00000506537 COL6A3P12111 3177 aa20.19■□□□□ 0.82
PDLIM7-216ENST00000506537 KIAA1671Q9BY89 1806 aa20.18■□□□□ 0.82
PDLIM7-216ENST00000506537 NPHP3-ACAD11A0A0J9YXS1 232 aa20.18■□□□□ 0.82
PDLIM7-216ENST00000506537 A0A0U1RQF3 1178 aa20.18■□□□□ 0.82
PDLIM7-216ENST00000506537 B4GALT5O43286 388 aa20.18■□□□□ 0.82
PDLIM7-216ENST00000506537 NAALADL2Q58DX5 795 aa20.18■□□□□ 0.82
PDLIM7-216ENST00000506537 ZNF598Q86UK7 904 aaKnown RBP20.18■□□□□ 0.82
PDLIM7-216ENST00000506537 MYLIPQ8WY64 445 aa20.18■□□□□ 0.82
PDLIM7-216ENST00000506537 TRAIPQ9BWF2 469 aa20.18■□□□□ 0.82
PDLIM7-216ENST00000506537 CCDC113Q9H0I3 377 aa20.18■□□□□ 0.82
PDLIM7-216ENST00000506537 ELAC1Q9H777 363 aaKnown RBP20.18■□□□□ 0.82
PDLIM7-216ENST00000506537 DACT1Q9NYF0 836 aa20.18■□□□□ 0.82
PDLIM7-216ENST00000506537 LRFN2Q9ULH4 789 aa20.18■□□□□ 0.82
PDLIM7-216ENST00000506537 PCDHB7Q9Y5E2 793 aa20.18■□□□□ 0.82
PDLIM7-216ENST00000506537 NLRC5Q86WI3 1866 aa20.18■□□□□ 0.82
PDLIM7-216ENST00000506537 ERLIN2O94905 339 aa20.17■□□□□ 0.82
PDLIM7-216ENST00000506537 EDN1P05305 212 aa20.17■□□□□ 0.82
PDLIM7-216ENST00000506537 FGFR1P11362 822 aa20.17■□□□□ 0.82
PDLIM7-216ENST00000506537 ERVK-21P61565 698 aa20.17■□□□□ 0.82
PDLIM7-216ENST00000506537 CACNB1Q02641 598 aaPredicted RBP20.17■□□□□ 0.82
PDLIM7-216ENST00000506537 DHX8Q14562 1220 aaKnown RBP20.17■□□□□ 0.82
PDLIM7-216ENST00000506537 PPP2R5AQ15172 486 aa20.17■□□□□ 0.82
PDLIM7-216ENST00000506537 PCBP1Q15365 356 aaKnown RBP eCLIP20.17■□□□□ 0.82
PDLIM7-216ENST00000506537 PAN2Q504Q3 1202 aaKnown RBP20.17■□□□□ 0.82
PDLIM7-216ENST00000506537 UBXN11Q5T124 520 aa20.17■□□□□ 0.82
PDLIM7-216ENST00000506537 TWF2Q6IBS0 349 aaKnown RBP20.17■□□□□ 0.82
PDLIM7-216ENST00000506537 GPBP1Q86WP2 473 aa20.17■□□□□ 0.82
PDLIM7-216ENST00000506537 KCNG4Q8TDN1 519 aa20.17■□□□□ 0.82
PDLIM7-216ENST00000506537 ARNTL2Q8WYA1 636 aa20.17■□□□□ 0.82
PDLIM7-216ENST00000506537 LARP4BQ92615 738 aaKnown RBP20.17■□□□□ 0.82
PDLIM7-216ENST00000506537 CPB2Q96IY4 423 aa20.17■□□□□ 0.82
PDLIM7-216ENST00000506537 C17orf80Q9BSJ5 609 aa20.17■□□□□ 0.82
PDLIM7-216ENST00000506537 TIPINQ9BVW5 301 aa20.17■□□□□ 0.82
PDLIM7-216ENST00000506537 MTUS1Q9ULD2 1270 aa20.17■□□□□ 0.82
PDLIM7-216ENST00000506537 RALGAPA2Q2PPJ7 1873 aa20.16■□□□□ 0.82
PDLIM7-216ENST00000506537 TTLL13PA6NNM8 815 aa20.16■□□□□ 0.82
PDLIM7-216ENST00000506537 SFI1A8K8P3 1242 aa20.16■□□□□ 0.82
PDLIM7-216ENST00000506537 CUTAO60888 179 aa20.16■□□□□ 0.82
PDLIM7-216ENST00000506537 ARF4P18085 180 aaPredicted RBP20.16■□□□□ 0.82
PDLIM7-216ENST00000506537 TXLNAP40222 546 aa20.16■□□□□ 0.82
PDLIM7-216ENST00000506537 NPTX2P47972 431 aa20.16■□□□□ 0.82
PDLIM7-216ENST00000506537 ADGRE1Q14246 886 aa20.16■□□□□ 0.82
PDLIM7-216ENST00000506537 SHC4Q6S5L8 630 aa20.16■□□□□ 0.82
PDLIM7-216ENST00000506537 PPP4R3CPQ6ZMV5 832 aa20.16■□□□□ 0.82
PDLIM7-216ENST00000506537 ZBTB8OSQ8IWT0 167 aa20.16■□□□□ 0.82
PDLIM7-216ENST00000506537 CMTR2Q8IYT2 770 aaKnown RBP20.16■□□□□ 0.82
PDLIM7-216ENST00000506537 DEPTORQ8TB45 409 aa20.16■□□□□ 0.82
PDLIM7-216ENST00000506537 IFT74Q96LB3 600 aa20.16■□□□□ 0.82
PDLIM7-216ENST00000506537 DRC1Q96MC2 740 aa20.16■□□□□ 0.82
PDLIM7-216ENST00000506537 TGS1Q96RS0 853 aaKnown RBP20.16■□□□□ 0.82
PDLIM7-216ENST00000506537 FZD8Q9H461 694 aa20.16■□□□□ 0.82
PDLIM7-216ENST00000506537 FAM105AQ9NUU6 356 aa20.16■□□□□ 0.82
PDLIM7-216ENST00000506537 KCND2Q9NZV8 630 aa20.16■□□□□ 0.82
PDLIM7-216ENST00000506537 STK17AQ9UEE5 414 aa20.16■□□□□ 0.82
PDLIM7-216ENST00000506537 CCDC39Q9UFE4 941 aa20.16■□□□□ 0.82
PDLIM7-216ENST00000506537 RCOR1Q9UKL0 485 aa20.16■□□□□ 0.82
PDLIM7-216ENST00000506537 CFAP45Q9UL16 551 aa20.16■□□□□ 0.82
PDLIM7-216ENST00000506537 PCDHA7Q9UN72 937 aa20.16■□□□□ 0.82
PDLIM7-216ENST00000506537 MYO9BQ13459 2157 aa20.15■□□□□ 0.82
PDLIM7-216ENST00000506537 REV3LO60673 3130 aa20.15■□□□□ 0.82
PDLIM7-216ENST00000506537 MEIS3P2A8K0S8 358 aa20.15■□□□□ 0.82
PDLIM7-216ENST00000506537 RFXAPO00287 272 aa20.15■□□□□ 0.82
PDLIM7-216ENST00000506537 PEX3P56589 373 aa20.15■□□□□ 0.82
PDLIM7-216ENST00000506537 BTG3Q14201 252 aaPredicted RBP20.15■□□□□ 0.82
PDLIM7-216ENST00000506537 FAM187BQ17R55 369 aa20.15■□□□□ 0.82
PDLIM7-216ENST00000506537 CLLU1OSQ5K130 101 aa20.15■□□□□ 0.82
PDLIM7-216ENST00000506537 RRAGBQ5VZM2 374 aa20.15■□□□□ 0.82
PDLIM7-216ENST00000506537 FIBCD1Q8N539 461 aa20.15■□□□□ 0.82
PDLIM7-216ENST00000506537 RNF169Q8NCN4 708 aa20.15■□□□□ 0.82
PDLIM7-216ENST00000506537 LPPQ93052 612 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms