RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 SOX1O00570 391 aaPredicted RBP8.07□□□□□ -1.12
GYPB-206ENST00000506516 TLL1O43897 1013 aa8.07□□□□□ -1.12
GYPB-206ENST00000506516 UPP2O95045 317 aa8.07□□□□□ -1.12
GYPB-206ENST00000506516 SRGAP2CP0DJJ0 459 aa8.07□□□□□ -1.12
GYPB-206ENST00000506516 CDC25AP30304 524 aa8.07□□□□□ -1.12
GYPB-206ENST00000506516 CEBPZQ03701 1054 aaKnown RBP8.07□□□□□ -1.12
GYPB-206ENST00000506516 NCBP1Q09161 790 aaKnown RBP8.07□□□□□ -1.12
GYPB-206ENST00000506516 LAMTOR4Q0VGL1 99 aa8.07□□□□□ -1.12
GYPB-206ENST00000506516 DRP2Q13474 957 aa8.07□□□□□ -1.12
GYPB-206ENST00000506516 TFDP1Q14186 410 aa8.07□□□□□ -1.12
GYPB-206ENST00000506516 STK38Q15208 465 aa8.07□□□□□ -1.12
GYPB-206ENST00000506516 PUS10Q3MIT2 529 aaKnown RBP8.07□□□□□ -1.12
GYPB-206ENST00000506516 TMEM259Q4ZIN3 620 aa8.07□□□□□ -1.12
GYPB-206ENST00000506516 ZNF697Q5TEC3 545 aa8.07□□□□□ -1.12
GYPB-206ENST00000506516 FOXD4L5Q5VV16 416 aaPredicted RBP8.07□□□□□ -1.12
GYPB-206ENST00000506516 ATL3Q6DD88 541 aa8.07□□□□□ -1.12
GYPB-206ENST00000506516 FAM173BQ6P4H8 233 aa8.07□□□□□ -1.12
GYPB-206ENST00000506516 THSD4Q6ZMP0 1018 aa8.07□□□□□ -1.12
GYPB-206ENST00000506516 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.07□□□□□ -1.12
GYPB-206ENST00000506516 CABP7Q86V35 215 aa8.07□□□□□ -1.12
GYPB-206ENST00000506516 RASSF8Q8NHQ8 419 aa8.07□□□□□ -1.12
GYPB-206ENST00000506516 PRPF31Q8WWY3 499 aaKnown RBP8.07□□□□□ -1.12
GYPB-206ENST00000506516 FOXD4L4Q8WXT5 416 aaPredicted RBP8.07□□□□□ -1.12
GYPB-206ENST00000506516 TOP1MTQ969P6 601 aa8.07□□□□□ -1.12
GYPB-206ENST00000506516 TIFAQ96CG3 184 aa8.07□□□□□ -1.12
GYPB-206ENST00000506516 NLRP4Q96MN2 994 aa8.07□□□□□ -1.12
GYPB-206ENST00000506516 RAD9AQ99638 391 aa8.07□□□□□ -1.12
GYPB-206ENST00000506516 FDXACB1Q9BRP7 624 aaPredicted RBP8.07□□□□□ -1.12
GYPB-206ENST00000506516 PBX4Q9BYU1 374 aa8.07□□□□□ -1.12
GYPB-206ENST00000506516 OSBPL7Q9BZF2 842 aa8.07□□□□□ -1.12
GYPB-206ENST00000506516 BHMT2Q9H2M3 363 aa8.07□□□□□ -1.12
GYPB-206ENST00000506516 ADAMTS10Q9H324 1103 aa8.07□□□□□ -1.12
GYPB-206ENST00000506516 SLC28A3Q9HAS3 691 aa8.07□□□□□ -1.12
GYPB-206ENST00000506516 KCNG1Q9UIX4 513 aa8.07□□□□□ -1.12
GYPB-206ENST00000506516 CFAP45Q9UL16 551 aa8.07□□□□□ -1.12
GYPB-206ENST00000506516 INSL6Q9Y581 213 aa8.07□□□□□ -1.12
GYPB-206ENST00000506516 ATP6V1DQ9Y5K8 247 aa8.07□□□□□ -1.12
GYPB-206ENST00000506516 SRPRBQ9Y5M8 271 aaKnown RBP8.07□□□□□ -1.12
GYPB-206ENST00000506516 COL4A3BPQ9Y5P4 624 aa8.07□□□□□ -1.12
GYPB-206ENST00000506516 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.06□□□□□ -1.12
GYPB-206ENST00000506516 PP2D1A8MPX8 630 aa8.06□□□□□ -1.12
GYPB-206ENST00000506516 USO1O60763 962 aaKnown RBP8.06□□□□□ -1.12
GYPB-206ENST00000506516 GJB5O95377 273 aa8.06□□□□□ -1.12
GYPB-206ENST00000506516 EYA4O95677 639 aa8.06□□□□□ -1.12
GYPB-206ENST00000506516 F13A1P00488 732 aa8.06□□□□□ -1.12
GYPB-206ENST00000506516 STAG3L1P0CL83 205 aa8.06□□□□□ -1.12
GYPB-206ENST00000506516 DARSP14868 501 aaKnown RBP8.06□□□□□ -1.12
GYPB-206ENST00000506516 CYP11B2P19099 503 aa8.06□□□□□ -1.12
GYPB-206ENST00000506516 SFPQP23246 707 aaKnown RBP eCLIP8.06□□□□□ -1.12
GYPB-206ENST00000506516 MARCKSP29966 332 aaPredicted RBP8.06□□□□□ -1.12
GYPB-206ENST00000506516 ARL2P36404 184 aa8.06□□□□□ -1.12
GYPB-206ENST00000506516 TXLNAP40222 546 aa8.06□□□□□ -1.12
GYPB-206ENST00000506516 PHKA2P46019 1235 aa8.06□□□□□ -1.12
GYPB-206ENST00000506516 RABGGTBP53611 331 aa8.06□□□□□ -1.12
GYPB-206ENST00000506516 DEFB103AP81534 67 aa8.06□□□□□ -1.12
GYPB-206ENST00000506516 POU5F1BQ06416 359 aa8.06□□□□□ -1.12
GYPB-206ENST00000506516 MCM6Q14566 821 aa8.06□□□□□ -1.12
GYPB-206ENST00000506516 SLC39A14Q15043 492 aa8.06□□□□□ -1.12
GYPB-206ENST00000506516 PTPAQ15257 358 aa8.06□□□□□ -1.12
GYPB-206ENST00000506516 PCBP1Q15365 356 aaKnown RBP eCLIP8.06□□□□□ -1.122e-29■■■■■ 27.7
GYPB-206ENST00000506516 ECM1Q16610 540 aa8.06□□□□□ -1.12
GYPB-206ENST00000506516 TCTN1Q2MV58 587 aa8.06□□□□□ -1.12
GYPB-206ENST00000506516 HYIQ5T013 277 aa8.06□□□□□ -1.12
GYPB-206ENST00000506516 FAM102BQ5T8I3 360 aa8.06□□□□□ -1.12
GYPB-206ENST00000506516 MAEAQ7L5Y9 396 aa8.06□□□□□ -1.12
GYPB-206ENST00000506516 SRGAP1Q7Z6B7 1085 aa8.06□□□□□ -1.12
GYPB-206ENST00000506516 KSR1Q8IVT5 923 aa8.06□□□□□ -1.12
GYPB-206ENST00000506516 RNF149Q8NC42 400 aa8.06□□□□□ -1.12
GYPB-206ENST00000506516 TMEM40Q8WWA1 233 aa8.06□□□□□ -1.12
GYPB-206ENST00000506516 ZNF668Q96K58 619 aaPredicted RBP8.06□□□□□ -1.12
GYPB-206ENST00000506516 USP28Q96RU2 1077 aa8.06□□□□□ -1.12
GYPB-206ENST00000506516 ERVK-5Q9HDB9 667 aa8.06□□□□□ -1.12
GYPB-206ENST00000506516 CHST12Q9NRB3 414 aa8.06□□□□□ -1.12
GYPB-206ENST00000506516 RGS18Q9NS28 235 aa8.06□□□□□ -1.12
GYPB-206ENST00000506516 C1orf112Q9NSG2 853 aa8.06□□□□□ -1.12
GYPB-206ENST00000506516 DACT1Q9NYF0 836 aa8.06□□□□□ -1.12
GYPB-206ENST00000506516 TFIP11Q9UBB9 837 aaKnown RBP8.06□□□□□ -1.12
GYPB-206ENST00000506516 CCDC39Q9UFE4 941 aa8.06□□□□□ -1.12
GYPB-206ENST00000506516 LRFN2Q9ULH4 789 aa8.06□□□□□ -1.12
GYPB-206ENST00000506516 PCDHB7Q9Y5E2 793 aa8.06□□□□□ -1.12
GYPB-206ENST00000506516 MORC2Q9Y6X9 1032 aaPredicted RBP8.06□□□□□ -1.12
GYPB-206ENST00000506516 LAMA2P24043 3122 aaKnown RBP8.05□□□□□ -1.12
GYPB-206ENST00000506516 KAT6AQ92794 2004 aa8.05□□□□□ -1.12
GYPB-206ENST00000506516 E9PMD0 336 aa8.05□□□□□ -1.12
GYPB-206ENST00000506516 SPTLC2O15270 562 aa8.05□□□□□ -1.12
GYPB-206ENST00000506516 PPP6R2O75170 966 aa8.05□□□□□ -1.12
GYPB-206ENST00000506516 YEATS4O95619 227 aa8.05□□□□□ -1.12
GYPB-206ENST00000506516 SKIP12755 728 aa8.05□□□□□ -1.12
GYPB-206ENST00000506516 NASPP49321 788 aaPredicted RBP8.05□□□□□ -1.12
GYPB-206ENST00000506516 PPP2R5AQ15172 486 aa8.05□□□□□ -1.12
GYPB-206ENST00000506516 FOXD4L6Q3SYB3 417 aaPredicted RBP8.05□□□□□ -1.12
GYPB-206ENST00000506516 FAM117BQ6P1L5 589 aa8.05□□□□□ -1.12
GYPB-206ENST00000506516 FOXD4L3Q6VB84 417 aaPredicted RBP8.05□□□□□ -1.12
GYPB-206ENST00000506516 SLC24A5Q71RS6 500 aa8.05□□□□□ -1.12
GYPB-206ENST00000506516 CATSPER4Q7RTX7 472 aa8.05□□□□□ -1.12
GYPB-206ENST00000506516 RTN4RL1Q86UN2 441 aaPredicted RBP8.05□□□□□ -1.12
GYPB-206ENST00000506516 FAM228AQ86W67 206 aa8.05□□□□□ -1.12
GYPB-206ENST00000506516 DEFB123Q8N688 67 aa8.05□□□□□ -1.12
GYPB-206ENST00000506516 SYT2Q8N9I0 419 aaPredicted RBP8.05□□□□□ -1.12
GYPB-206ENST00000506516 LINC00301Q8NCQ3 95 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms