RNA–Protein interactions for RNA: ENST00000505883.1

MBD4-205, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 3

Gene MBD4, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-205ENST00000505883 TRAIPQ9BWF2 469 aa18.21■□□□□ 0.51
MBD4-205ENST00000505883 NFKBIZQ9BYH8 718 aa18.21■□□□□ 0.51
MBD4-205ENST00000505883 NT5C3AQ9H0P0 336 aa18.21■□□□□ 0.51
MBD4-205ENST00000505883 FBXO2Q9UK22 296 aaPredicted RBP18.21■□□□□ 0.51
MBD4-205ENST00000505883 MRPL42Q9Y6G3 142 aaKnown RBP18.21■□□□□ 0.51
MBD4-205ENST00000505883 TBKBP1A7MCY6 615 aa18.2■□□□□ 0.5
MBD4-205ENST00000505883 ZSCAN22P10073 491 aaPredicted RBP18.2■□□□□ 0.5
MBD4-205ENST00000505883 PDIA4P13667 645 aaKnown RBP18.2■□□□□ 0.5
MBD4-205ENST00000505883 PKP1Q13835 747 aa18.2■□□□□ 0.5
MBD4-205ENST00000505883 TMEM119Q4V9L6 283 aa18.2■□□□□ 0.5
MBD4-205ENST00000505883 CLP1Q92989 425 aaKnown RBP18.2■□□□□ 0.5
MBD4-205ENST00000505883 RUSC1Q9BVN2 902 aa18.2■□□□□ 0.5
MBD4-205ENST00000505883 CSRNP2Q9H175 543 aa18.2■□□□□ 0.5
MBD4-205ENST00000505883 RNF19AQ9NV58 838 aa18.2■□□□□ 0.5
MBD4-205ENST00000505883 SRPRBQ9Y5M8 271 aaKnown RBP18.2■□□□□ 0.5
MBD4-205ENST00000505883 MTCH2Q9Y6C9 303 aa18.2■□□□□ 0.5
MBD4-205ENST00000505883 TSPAN1O60635 241 aa18.19■□□□□ 0.5
MBD4-205ENST00000505883 ERLIN2O94905 339 aa18.19■□□□□ 0.5
MBD4-205ENST00000505883 EOMESO95936 686 aa18.19■□□□□ 0.5
MBD4-205ENST00000505883 SSBP05455 408 aaKnown RBP eCLIP18.19■□□□□ 0.5
MBD4-205ENST00000505883 ATF7P17544 494 aaPredicted RBP18.19■□□□□ 0.5
MBD4-205ENST00000505883 POU3F3P20264 500 aaPredicted RBP18.19■□□□□ 0.5
MBD4-205ENST00000505883 CTNNB1P35222 781 aa18.19■□□□□ 0.5
MBD4-205ENST00000505883 BMPR1AP36894 532 aa18.19■□□□□ 0.5
MBD4-205ENST00000505883 SLC39A14Q15043 492 aa18.19■□□□□ 0.5
MBD4-205ENST00000505883 AMHR2Q16671 573 aa18.19■□□□□ 0.5
MBD4-205ENST00000505883 SPECC1Q5M775 1068 aa18.19■□□□□ 0.5
MBD4-205ENST00000505883 RINT1Q6NUQ1 792 aa18.19■□□□□ 0.5
MBD4-205ENST00000505883 ZNF598Q86UK7 904 aaKnown RBP18.19■□□□□ 0.5
MBD4-205ENST00000505883 KCTD17Q8N5Z5 321 aa18.19■□□□□ 0.5
MBD4-205ENST00000505883 SYT2Q8N9I0 419 aaPredicted RBP18.19■□□□□ 0.5
MBD4-205ENST00000505883 PPM1EQ8WY54 764 aa18.19■□□□□ 0.5
MBD4-205ENST00000505883 KIFAP3Q92845 792 aa18.19■□□□□ 0.5
MBD4-205ENST00000505883 CALML4Q96GE6 196 aa18.19■□□□□ 0.5
MBD4-205ENST00000505883 CLIC6Q96NY7 704 aa18.19■□□□□ 0.5
MBD4-205ENST00000505883 FAM105AQ9NUU6 356 aa18.19■□□□□ 0.5
MBD4-205ENST00000505883 TFIP11Q9UBB9 837 aaKnown RBP18.19■□□□□ 0.5
MBD4-205ENST00000505883 PRUNE2Q8WUY3 3088 aa18.19■□□□□ 0.5
MBD4-205ENST00000505883 SLC26A4O43511 780 aa18.18■□□□□ 0.5
MBD4-205ENST00000505883 GTPBP6O43824 516 aaPredicted RBP18.18■□□□□ 0.5
MBD4-205ENST00000505883 F13A1P00488 732 aa18.18■□□□□ 0.5
MBD4-205ENST00000505883 PLA2G4BP0C869 781 aa18.18■□□□□ 0.5
MBD4-205ENST00000505883 NASPP49321 788 aaPredicted RBP18.18■□□□□ 0.5
MBD4-205ENST00000505883 SLC12A3P55017 1021 aa18.18■□□□□ 0.5
MBD4-205ENST00000505883 KARSQ15046 597 aaKnown RBP18.18■□□□□ 0.5
MBD4-205ENST00000505883 PCBP1Q15365 356 aaKnown RBP eCLIP18.18■□□□□ 0.5
MBD4-205ENST00000505883 CCDC85BQ15834 202 aaPredicted RBP18.18■□□□□ 0.5
MBD4-205ENST00000505883 FOXD4L6Q3SYB3 417 aaPredicted RBP18.18■□□□□ 0.5
MBD4-205ENST00000505883 LONRF3Q496Y0 759 aa18.18■□□□□ 0.5
MBD4-205ENST00000505883 UBXN11Q5T124 520 aa18.18■□□□□ 0.5
MBD4-205ENST00000505883 CDCA2Q69YH5 1023 aaPredicted RBP18.18■□□□□ 0.5
MBD4-205ENST00000505883 FOXD4L3Q6VB84 417 aaPredicted RBP18.18■□□□□ 0.5
MBD4-205ENST00000505883 C1orf186Q6ZWK4 172 aa18.18■□□□□ 0.5
MBD4-205ENST00000505883 USP49Q70CQ1 688 aa18.18■□□□□ 0.5
MBD4-205ENST00000505883 MICALL1Q8N3F8 863 aa18.18■□□□□ 0.5
MBD4-205ENST00000505883 LRRC15Q8TF66 581 aa18.18■□□□□ 0.5
MBD4-205ENST00000505883 CPB2Q96IY4 423 aa18.18■□□□□ 0.5
MBD4-205ENST00000505883 EPSTI1Q96J88 318 aa18.18■□□□□ 0.5
MBD4-205ENST00000505883 CASD1Q96PB1 797 aa18.18■□□□□ 0.5
MBD4-205ENST00000505883 TMEM117Q9H0C3 514 aa18.18■□□□□ 0.5
MBD4-205ENST00000505883 C5orf67F2Z3F1 127 aa18.17■□□□□ 0.5
MBD4-205ENST00000505883 H3BNC9 293 aa18.17■□□□□ 0.5
MBD4-205ENST00000505883 B4GALT5O43286 388 aa18.17■□□□□ 0.5
MBD4-205ENST00000505883 HOXA2O43364 376 aa18.17■□□□□ 0.5
MBD4-205ENST00000505883 ZNF623O75123 536 aa18.17■□□□□ 0.5
MBD4-205ENST00000505883 HIP1RO75146 1068 aa18.17■□□□□ 0.5
MBD4-205ENST00000505883 SKIP12755 728 aa18.17■□□□□ 0.5
MBD4-205ENST00000505883 NAMPTP43490 491 aa18.17■□□□□ 0.5
MBD4-205ENST00000505883 NCBP1Q09161 790 aaKnown RBP18.17■□□□□ 0.5
MBD4-205ENST00000505883 GPM6BQ13491 265 aa18.17■□□□□ 0.5
MBD4-205ENST00000505883 PPP2R5AQ15172 486 aa18.17■□□□□ 0.5
MBD4-205ENST00000505883 CLLU1OSQ5K130 101 aa18.17■□□□□ 0.5
MBD4-205ENST00000505883 ZBTB8OSQ8IWT0 167 aa18.17■□□□□ 0.5
MBD4-205ENST00000505883 ABI1Q8IZP0 508 aa18.17■□□□□ 0.5
MBD4-205ENST00000505883 DAW1Q8N136 415 aa18.17■□□□□ 0.5
MBD4-205ENST00000505883 RASSF8Q8NHQ8 419 aa18.17■□□□□ 0.5
MBD4-205ENST00000505883 LPPQ93052 612 aa18.17■□□□□ 0.5
MBD4-205ENST00000505883 IFT74Q96LB3 600 aa18.17■□□□□ 0.5
MBD4-205ENST00000505883 ZNF396Q96N95 335 aaPredicted RBP18.17■□□□□ 0.5
MBD4-205ENST00000505883 KIFC3Q9BVG8 833 aa18.17■□□□□ 0.5
MBD4-205ENST00000505883 CCSER1Q9C0I3 900 aa18.17■□□□□ 0.5
MBD4-205ENST00000505883 TYW1Q9NV66 732 aaKnown RBP18.17■□□□□ 0.5
MBD4-205ENST00000505883 HCSTQ9UBK5 93 aa18.17■□□□□ 0.5
MBD4-205ENST00000505883 RWDD3Q9Y3V2 267 aa18.17■□□□□ 0.5
MBD4-205ENST00000505883 PCDHB2Q9Y5E7 798 aa18.17■□□□□ 0.5
MBD4-205ENST00000505883 MORC2Q9Y6X9 1032 aaPredicted RBP18.17■□□□□ 0.5
MBD4-205ENST00000505883 MEIS3P2A8K0S8 358 aa18.16■□□□□ 0.5
MBD4-205ENST00000505883 RB1P06400 928 aa18.16■□□□□ 0.5
MBD4-205ENST00000505883 ARF4P18085 180 aaPredicted RBP18.16■□□□□ 0.5
MBD4-205ENST00000505883 PLCG1P19174 1290 aa18.16■□□□□ 0.5
MBD4-205ENST00000505883 GUCY2CP25092 1073 aa18.16■□□□□ 0.5
MBD4-205ENST00000505883 AXLP30530 894 aa18.16■□□□□ 0.5
MBD4-205ENST00000505883 RAB27AP51159 221 aa18.16■□□□□ 0.5
MBD4-205ENST00000505883 RAD51AP2Q09MP3 1159 aa18.16■□□□□ 0.5
MBD4-205ENST00000505883 MAPK7Q13164 816 aa18.16■□□□□ 0.5
MBD4-205ENST00000505883 STK38Q15208 465 aa18.16■□□□□ 0.5
MBD4-205ENST00000505883 SPOUT1Q5T280 376 aaKnown RBP18.16■□□□□ 0.5
MBD4-205ENST00000505883 NOTUMQ6P988 496 aa18.16■□□□□ 0.5
MBD4-205ENST00000505883 LRRC55Q6ZSA7 311 aa18.16■□□□□ 0.5
MBD4-205ENST00000505883 LINC00301Q8NCQ3 95 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms