RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 CCDC85BQ15834 202 aaPredicted RBP12.66□□□□□ -0.38
KDM3B-203ENST00000505756 FAM102BQ5T8I3 360 aa12.66□□□□□ -0.38
KDM3B-203ENST00000505756 TWF2Q6IBS0 349 aaKnown RBP12.66□□□□□ -0.38
KDM3B-203ENST00000505756 PADI6Q6TGC4 694 aa12.66□□□□□ -0.38
KDM3B-203ENST00000505756 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.66□□□□□ -0.38
KDM3B-203ENST00000505756 MICALL1Q8N3F8 863 aa12.66□□□□□ -0.38
KDM3B-203ENST00000505756 KCTD17Q8N5Z5 321 aa12.66□□□□□ -0.38
KDM3B-203ENST00000505756 ASAP3Q8TDY4 903 aa12.66□□□□□ -0.38
KDM3B-203ENST00000505756 C11orf84Q9BUA3 381 aaPredicted RBP12.66□□□□□ -0.38
KDM3B-203ENST00000505756 PLVAPQ9BX97 442 aa12.66□□□□□ -0.38
KDM3B-203ENST00000505756 BHMT2Q9H2M3 363 aa12.66□□□□□ -0.38
KDM3B-203ENST00000505756 MINDY3Q9H8M7 445 aa12.66□□□□□ -0.38
KDM3B-203ENST00000505756 MRPL42Q9Y6G3 142 aaKnown RBP12.66□□□□□ -0.38
KDM3B-203ENST00000505756 ERLIN2O94905 339 aa12.65□□□□□ -0.38
KDM3B-203ENST00000505756 CDC25AP30304 524 aa12.65□□□□□ -0.38
KDM3B-203ENST00000505756 AXLP30530 894 aa12.65□□□□□ -0.38
KDM3B-203ENST00000505756 MCM4P33991 863 aa12.65□□□□□ -0.38
KDM3B-203ENST00000505756 NASPP49321 788 aaPredicted RBP12.65□□□□□ -0.38
KDM3B-203ENST00000505756 RAB27AP51159 221 aa12.65□□□□□ -0.38
KDM3B-203ENST00000505756 SF3A1Q15459 793 aaKnown RBP12.65□□□□□ -0.38
KDM3B-203ENST00000505756 PTPROQ16827 1216 aa12.65□□□□□ -0.38
KDM3B-203ENST00000505756 MAEAQ7L5Y9 396 aa12.65□□□□□ -0.38
KDM3B-203ENST00000505756 ZNF598Q86UK7 904 aaKnown RBP12.65□□□□□ -0.38
KDM3B-203ENST00000505756 ABI1Q8IZP0 508 aa12.65□□□□□ -0.38
KDM3B-203ENST00000505756 RSPH1Q8WYR4 309 aa12.65□□□□□ -0.38
KDM3B-203ENST00000505756 P2RX5Q93086 422 aa12.65□□□□□ -0.38
KDM3B-203ENST00000505756 AK8Q96MA6 479 aa12.65□□□□□ -0.38
KDM3B-203ENST00000505756 MMTAG2Q9BU76 263 aaKnown RBP12.65□□□□□ -0.38
KDM3B-203ENST00000505756 SCAND2PQ9GZW5 306 aaPredicted RBP12.65□□□□□ -0.38
KDM3B-203ENST00000505756 TMEM117Q9H0C3 514 aa12.65□□□□□ -0.38
KDM3B-203ENST00000505756 NT5C3AQ9H0P0 336 aa12.65□□□□□ -0.38
KDM3B-203ENST00000505756 GPRC5CQ9NQ84 441 aa12.65□□□□□ -0.38
KDM3B-203ENST00000505756 DNM3Q9UQ16 869 aa12.65□□□□□ -0.38
KDM3B-203ENST00000505756 NLRC5Q86WI3 1866 aa12.65□□□□□ -0.38
KDM3B-203ENST00000505756 PRUNE2Q8WUY3 3088 aa12.64□□□□□ -0.39
KDM3B-203ENST00000505756 E9PMD0 336 aa12.64□□□□□ -0.39
KDM3B-203ENST00000505756 INO80B-WBP1J3KQ70 363 aa12.64□□□□□ -0.39
KDM3B-203ENST00000505756 SLC26A4O43511 780 aa12.64□□□□□ -0.39
KDM3B-203ENST00000505756 YEATS4O95619 227 aa12.64□□□□□ -0.39
KDM3B-203ENST00000505756 EYA4O95677 639 aa12.64□□□□□ -0.39
KDM3B-203ENST00000505756 ATF7P17544 494 aaPredicted RBP12.64□□□□□ -0.39
KDM3B-203ENST00000505756 DNM1Q05193 864 aaKnown RBP12.64□□□□□ -0.39
KDM3B-203ENST00000505756 MBTD1Q05BQ5 628 aa12.64□□□□□ -0.39
KDM3B-203ENST00000505756 NCBP1Q09161 790 aaKnown RBP12.64□□□□□ -0.39
KDM3B-203ENST00000505756 NFKBIBQ15653 356 aa12.64□□□□□ -0.39
KDM3B-203ENST00000505756 CSPP1Q1MSJ5 1256 aa12.64□□□□□ -0.39
KDM3B-203ENST00000505756 NAALADL2Q58DX5 795 aa12.64□□□□□ -0.39
KDM3B-203ENST00000505756 HYIQ5T013 277 aa12.64□□□□□ -0.39
KDM3B-203ENST00000505756 RNF169Q8NCN4 708 aa12.64□□□□□ -0.39
KDM3B-203ENST00000505756 MRPL38Q96DV4 380 aaKnown RBP12.64□□□□□ -0.39
KDM3B-203ENST00000505756 ZNF396Q96N95 335 aaPredicted RBP12.64□□□□□ -0.39
KDM3B-203ENST00000505756 CASD1Q96PB1 797 aa12.64□□□□□ -0.39
KDM3B-203ENST00000505756 AAASQ9NRG9 546 aa12.64□□□□□ -0.39
KDM3B-203ENST00000505756 FAM105AQ9NUU6 356 aa12.64□□□□□ -0.39
KDM3B-203ENST00000505756 RNF19AQ9NV58 838 aa12.64□□□□□ -0.39
KDM3B-203ENST00000505756 CFAP45Q9UL16 551 aa12.64□□□□□ -0.39
KDM3B-203ENST00000505756 UNC80Q8N2C7 3258 aa12.63□□□□□ -0.39
KDM3B-203ENST00000505756 LRRIQ4A6NIV6 560 aa12.63□□□□□ -0.39
KDM3B-203ENST00000505756 GOLGA6L22H0YM25 854 aa12.63□□□□□ -0.39
KDM3B-203ENST00000505756 TSPAN1O60635 241 aa12.63□□□□□ -0.39
KDM3B-203ENST00000505756 ZNF623O75123 536 aa12.63□□□□□ -0.39
KDM3B-203ENST00000505756 HOXA11P31270 313 aaPredicted RBP12.63□□□□□ -0.39
KDM3B-203ENST00000505756 LONP1P36776 959 aaKnown RBP12.63□□□□□ -0.39
KDM3B-203ENST00000505756 NAMPTP43490 491 aa12.63□□□□□ -0.39
KDM3B-203ENST00000505756 PPP2R5AQ15172 486 aa12.63□□□□□ -0.39
KDM3B-203ENST00000505756 CLLU1OSQ5K130 101 aa12.63□□□□□ -0.39
KDM3B-203ENST00000505756 SPOUT1Q5T280 376 aaKnown RBP12.63□□□□□ -0.39
KDM3B-203ENST00000505756 CDCA2Q69YH5 1023 aaPredicted RBP12.63□□□□□ -0.39
KDM3B-203ENST00000505756 NOTUMQ6P988 496 aa12.63□□□□□ -0.39
KDM3B-203ENST00000505756 ZBTB8OSQ8IWT0 167 aa12.63□□□□□ -0.39
KDM3B-203ENST00000505756 LRRC43Q8N309 656 aa12.63□□□□□ -0.39
KDM3B-203ENST00000505756 KIFAP3Q92845 792 aa12.63□□□□□ -0.39
KDM3B-203ENST00000505756 PGBD4Q96DM1 585 aa12.63□□□□□ -0.39
KDM3B-203ENST00000505756 CCDC51Q96ER9 411 aa12.63□□□□□ -0.39
KDM3B-203ENST00000505756 CDK5RAP3Q96JB5 506 aa12.63□□□□□ -0.39
KDM3B-203ENST00000505756 LMAN2LQ9H0V9 348 aa12.63□□□□□ -0.39
KDM3B-203ENST00000505756 C2orf40Q9H1Z8 148 aa12.63□□□□□ -0.39
KDM3B-203ENST00000505756 TYW1Q9NV66 732 aaKnown RBP12.63□□□□□ -0.39
KDM3B-203ENST00000505756 PCDHB12Q9Y5F1 795 aa12.63□□□□□ -0.39
KDM3B-203ENST00000505756 FNDC1Q4ZHG4 1894 aaPredicted RBP12.63□□□□□ -0.39
KDM3B-203ENST00000505756 LAG3P18627 525 aa12.62□□□□□ -0.39
KDM3B-203ENST00000505756 PTPAQ15257 358 aa12.62□□□□□ -0.39
KDM3B-203ENST00000505756 SKIV2LQ15477 1246 aaKnown RBP12.62□□□□□ -0.39
KDM3B-203ENST00000505756 ZRSR1Q15695 479 aaKnown RBP12.62□□□□□ -0.39
KDM3B-203ENST00000505756 AMHR2Q16671 573 aa12.62□□□□□ -0.39
KDM3B-203ENST00000505756 TIGD5Q53EQ6 642 aa12.62□□□□□ -0.39
KDM3B-203ENST00000505756 UBXN11Q5T124 520 aa12.62□□□□□ -0.39
KDM3B-203ENST00000505756 FOXD4L5Q5VV16 416 aaPredicted RBP12.62□□□□□ -0.39
KDM3B-203ENST00000505756 KCNK18Q7Z418 384 aa12.62□□□□□ -0.39
KDM3B-203ENST00000505756 CABP7Q86V35 215 aa12.62□□□□□ -0.39
KDM3B-203ENST00000505756 KLHL23Q8NBE8 558 aa12.62□□□□□ -0.39
KDM3B-203ENST00000505756 CNNM3Q8NE01 707 aa12.62□□□□□ -0.39
KDM3B-203ENST00000505756 DEPTORQ8TB45 409 aa12.62□□□□□ -0.39
KDM3B-203ENST00000505756 HELQQ8TDG4 1101 aa12.62□□□□□ -0.39
KDM3B-203ENST00000505756 FOXD4L4Q8WXT5 416 aaPredicted RBP12.62□□□□□ -0.39
KDM3B-203ENST00000505756 BSNDQ8WZ55 320 aa12.62□□□□□ -0.39
KDM3B-203ENST00000505756 IFT74Q96LB3 600 aa12.62□□□□□ -0.39
KDM3B-203ENST00000505756 PRIMPOLQ96LW4 560 aa12.62□□□□□ -0.39
KDM3B-203ENST00000505756 PNMA5Q96PV4 448 aa12.62□□□□□ -0.39
KDM3B-203ENST00000505756 USP28Q96RU2 1077 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms