RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 PAF1Q8N7H5 531 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 PHOSPHO1Q8TCT1 267 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 PARD3BQ8TEW8 1205 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 AUTS2Q8WXX7 1259 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 EAF2Q96CJ1 260 aaPredicted RBP4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 MVB12AQ96EY5 273 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 PLCD4Q9BRC7 762 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 NAA15Q9BXJ9 866 aaKnown RBP4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 ANO3Q9BYT9 981 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 CD244Q9BZW8 370 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 QRSL1Q9H0R6 528 aaKnown RBP4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 TMEM60Q9H2L4 133 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 SMOC1Q9H4F8 434 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 ANAPC4Q9UJX5 808 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 DMTF1Q9Y222 760 aa4.81□□□□□ -1.64
TRAPPC13-208ENST00000505553 HGSO14964 777 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 FOXP2O15409 715 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 PQBP1O60828 265 aaKnown RBP4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 PPP1R11O60927 126 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 TUSC2O75896 110 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 MYL3P08590 195 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 ZKSCAN1P17029 563 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 PTPN1P18031 435 aaKnown RBP4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 PPM1FP49593 454 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 CACNB3P54284 484 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 SLURP1P55000 103 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 ERVFRD-1P60508 538 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 CYP4F8P98187 520 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 BTKQ06187 659 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 STK3Q13188 491 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 RAB3GAP1Q15042 981 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 KIAA0753Q2KHM9 967 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 HSF5Q4G112 596 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 MBNL2Q5VZF2 373 aaKnown RBP4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 BTBD8Q5XKL5 378 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 STEAP3Q658P3 488 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 DENND1CQ8IV53 801 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 TRIM48Q8IWZ4 208 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 CPXCR1Q8N123 301 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 ANKRD42Q8N9B4 389 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 FAM156AQ8NDB6 213 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 VPS37AQ8NEZ2 397 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 RSAD2Q8WXG1 361 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 FERMT2Q96AC1 680 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 COA7Q96BR5 231 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 MTA3Q9BTC8 594 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 RIC8BQ9NVN3 520 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 PNMA2Q9UL42 364 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 RWDD3Q9Y3V2 267 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 ST20-MTHFSA0A0A6YYL1 179 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 ABHD14A-ACY1A0A1B0GW23 586 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 KLRG2A4D1S0 409 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 A6NNZ2 444 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 CYR61O00622 381 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 CLEC2LP0C7M8 214 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 PRKCAP17252 672 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 SLC6A11P48066 632 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 TRAPPC10P48553 1259 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 ALDH5A1P51649 535 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 HERVK_113P62684 666 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 IFIT5Q13325 482 aaKnown RBP4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 LLGL1Q15334 1064 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 SEC23AQ15436 765 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 LONRF1Q17RB8 773 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 MUM1Q2TAK8 710 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 ANO4Q32M45 955 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 PGS1Q32NB8 556 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 CATSPEREQ5SY80 951 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 CCDC62Q6P9F0 684 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 OVCH2Q7RTZ1 564 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 MYLK4Q86YV6 388 aaPredicted RBP4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 PRR18Q8N4B5 295 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 NUP43Q8NFH3 380 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 PGBD4Q96DM1 585 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 CCDC138Q96M89 665 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 SLC2A13Q96QE2 648 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 WDR26Q9H7D7 661 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 CASS4Q9NQ75 786 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 KLHL14Q9P2G3 628 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 EDARQ9UNE0 448 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 PPP2R3BQ9Y5P8 575 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 NUMBLQ9Y6R0 609 aa4.8□□□□□ -1.64
TRAPPC13-208ENST00000505553 UBA6A0AVT1 1052 aaPredicted RBP4.79□□□□□ -1.64
TRAPPC13-208ENST00000505553 PRAMEF25A6NGN4 478 aa4.79□□□□□ -1.64
TRAPPC13-208ENST00000505553 FAM90A27PA6NNH2 459 aa4.79□□□□□ -1.64
TRAPPC13-208ENST00000505553 GOLIM4O00461 696 aa4.79□□□□□ -1.64
TRAPPC13-208ENST00000505553 SLC27A2O14975 620 aa4.79□□□□□ -1.64
TRAPPC13-208ENST00000505553 TADA3O75528 432 aa4.79□□□□□ -1.64
TRAPPC13-208ENST00000505553 C4BPAP04003 597 aaKnown RBP4.79□□□□□ -1.64
TRAPPC13-208ENST00000505553 SLC5A1P13866 664 aa4.79□□□□□ -1.64
TRAPPC13-208ENST00000505553 CD53P19397 219 aa4.79□□□□□ -1.64
TRAPPC13-208ENST00000505553 TM4SF4P48230 202 aa4.79□□□□□ -1.64
TRAPPC13-208ENST00000505553 BCAR1P56945 870 aa4.79□□□□□ -1.64
TRAPPC13-208ENST00000505553 TUSC3Q13454 348 aa4.79□□□□□ -1.64
TRAPPC13-208ENST00000505553 SEMA5AQ13591 1074 aa4.79□□□□□ -1.64
TRAPPC13-208ENST00000505553 PITRM1Q5JRX3 1037 aa4.79□□□□□ -1.64
TRAPPC13-208ENST00000505553 TTC38Q5R3I4 469 aa4.79□□□□□ -1.64
TRAPPC13-208ENST00000505553 TMC6Q7Z403 805 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms