RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 RWDD3Q9Y3V2 267 aa18.73■□□□□ 0.59
SYNE4-207ENST00000505054 MYO7AQ13402 2215 aa18.72■□□□□ 0.59
SYNE4-207ENST00000505054 C5orf67F2Z3F1 127 aa18.72■□□□□ 0.59
SYNE4-207ENST00000505054 SLC26A4O43511 780 aa18.72■□□□□ 0.59
SYNE4-207ENST00000505054 GAS2O43903 313 aaKnown RBP18.72■□□□□ 0.59
SYNE4-207ENST00000505054 EYA4O95677 639 aa18.72■□□□□ 0.59
SYNE4-207ENST00000505054 CD52P31358 61 aa18.72■□□□□ 0.59
SYNE4-207ENST00000505054 CTNNB1P35222 781 aa18.72■□□□□ 0.59
SYNE4-207ENST00000505054 CRYBB1P53674 252 aaPredicted RBP18.72■□□□□ 0.59
SYNE4-207ENST00000505054 NUCB2P80303 420 aa18.72■□□□□ 0.59
SYNE4-207ENST00000505054 KARSQ15046 597 aaKnown RBP18.72■□□□□ 0.59
SYNE4-207ENST00000505054 PADI6Q6TGC4 694 aa18.72■□□□□ 0.59
SYNE4-207ENST00000505054 RHPN2Q8IUC4 686 aa18.72■□□□□ 0.59
SYNE4-207ENST00000505054 KSR1Q8IVT5 923 aa18.72■□□□□ 0.59
SYNE4-207ENST00000505054 FIBCD1Q8N539 461 aa18.72■□□□□ 0.59
SYNE4-207ENST00000505054 CCSER1Q9C0I3 900 aa18.72■□□□□ 0.59
SYNE4-207ENST00000505054 NT5C3AQ9H0P0 336 aa18.72■□□□□ 0.59
SYNE4-207ENST00000505054 PRKAG3Q9UGI9 489 aa18.72■□□□□ 0.59
SYNE4-207ENST00000505054 DNM3Q9UQ16 869 aa18.72■□□□□ 0.59
SYNE4-207ENST00000505054 NOC2LQ9Y3T9 749 aaKnown RBP18.72■□□□□ 0.59
SYNE4-207ENST00000505054 SQORQ9Y6N5 450 aa18.72■□□□□ 0.59
SYNE4-207ENST00000505054 TTC3P53804 2025 aa18.72■□□□□ 0.59
SYNE4-207ENST00000505054 EVPLQ92817 2033 aa18.72■□□□□ 0.59
SYNE4-207ENST00000505054 ADGRA3Q8IWK6 1321 aa18.72■□□□□ 0.59
SYNE4-207ENST00000505054 ZP2Q05996 745 aa18.71■□□□□ 0.59
SYNE4-207ENST00000505054 ZNF710Q8N1W2 664 aa18.71■□□□□ 0.59
SYNE4-207ENST00000505054 KCNG4Q8TDN1 519 aa18.71■□□□□ 0.59
SYNE4-207ENST00000505054 TCP11Q8WWU5 503 aa18.71■□□□□ 0.59
SYNE4-207ENST00000505054 PRPF31Q8WWY3 499 aaKnown RBP18.71■□□□□ 0.59
SYNE4-207ENST00000505054 PSPC1Q8WXF1 523 aaKnown RBP18.71■□□□□ 0.59
SYNE4-207ENST00000505054 CDK5RAP3Q96JB5 506 aa18.71■□□□□ 0.59
SYNE4-207ENST00000505054 C11orf84Q9BUA3 381 aaPredicted RBP18.71■□□□□ 0.59
SYNE4-207ENST00000505054 LMAN2LQ9H0V9 348 aa18.71■□□□□ 0.59
SYNE4-207ENST00000505054 GPRC5CQ9NQ84 441 aa18.71■□□□□ 0.59
SYNE4-207ENST00000505054 TSHZ2Q9NRE2 1034 aa18.71■□□□□ 0.59
SYNE4-207ENST00000505054 CLDND1Q9NY35 253 aa18.71■□□□□ 0.59
SYNE4-207ENST00000505054 RCOR1Q9UKL0 485 aa18.71■□□□□ 0.59
SYNE4-207ENST00000505054 CFAP45Q9UL16 551 aa18.71■□□□□ 0.59
SYNE4-207ENST00000505054 COL4A3BPQ9Y5P4 624 aa18.71■□□□□ 0.59
SYNE4-207ENST00000505054 PIEZO1Q92508 2521 aa18.71■□□□□ 0.59
SYNE4-207ENST00000505054 DCXO43602 365 aa18.7■□□□□ 0.58
SYNE4-207ENST00000505054 NCK2O43639 380 aa18.7■□□□□ 0.58
SYNE4-207ENST00000505054 RB1P06400 928 aa18.7■□□□□ 0.58
SYNE4-207ENST00000505054 CYP11B2P19099 503 aa18.7■□□□□ 0.58
SYNE4-207ENST00000505054 PLCG1P19174 1290 aa18.7■□□□□ 0.58
SYNE4-207ENST00000505054 ARL2P36404 184 aa18.7■□□□□ 0.58
SYNE4-207ENST00000505054 LAMTOR4Q0VGL1 99 aa18.7■□□□□ 0.58
SYNE4-207ENST00000505054 CSPP1Q1MSJ5 1256 aa18.7■□□□□ 0.58
SYNE4-207ENST00000505054 AXDND1Q5T1B0 1012 aaPredicted RBP18.7■□□□□ 0.58
SYNE4-207ENST00000505054 EP400NLQ6ZTU2 488 aa18.7■□□□□ 0.58
SYNE4-207ENST00000505054 FAM228AQ86W67 206 aa18.7■□□□□ 0.58
SYNE4-207ENST00000505054 KCTD17Q8N5Z5 321 aa18.7■□□□□ 0.58
SYNE4-207ENST00000505054 ASAP3Q8TDY4 903 aa18.7■□□□□ 0.58
SYNE4-207ENST00000505054 NLRP7Q8WX94 980 aa18.7■□□□□ 0.58
SYNE4-207ENST00000505054 CALML4Q96GE6 196 aa18.7■□□□□ 0.58
SYNE4-207ENST00000505054 SCLT1Q96NL6 688 aa18.7■□□□□ 0.58
SYNE4-207ENST00000505054 RUSC1Q9BVN2 902 aa18.7■□□□□ 0.58
SYNE4-207ENST00000505054 POLR3FQ9H1D9 316 aaPredicted RBP18.7■□□□□ 0.58
SYNE4-207ENST00000505054 RC3H2Q9HBD1 1191 aaKnown RBP18.7■□□□□ 0.58
SYNE4-207ENST00000505054 BLOC1S4Q9NUP1 217 aa18.7■□□□□ 0.58
SYNE4-207ENST00000505054 PADI3Q9ULW8 664 aa18.7■□□□□ 0.58
SYNE4-207ENST00000505054 LOXHD1Q8IVV2 1947 aa18.7■□□□□ 0.58
SYNE4-207ENST00000505054 A0A087WZ62 844 aa18.69■□□□□ 0.58
SYNE4-207ENST00000505054 LINC00271P0C7V0 271 aa18.69■□□□□ 0.58
SYNE4-207ENST00000505054 DARSP14868 501 aaKnown RBP18.69■□□□□ 0.58
SYNE4-207ENST00000505054 EIF4BP23588 611 aaKnown RBP18.69■□□□□ 0.58
SYNE4-207ENST00000505054 KRT85P78386 507 aa18.69■□□□□ 0.58
SYNE4-207ENST00000505054 PAK2Q13177 524 aa18.69■□□□□ 0.58
SYNE4-207ENST00000505054 MAEAQ7L5Y9 396 aa18.69■□□□□ 0.58
SYNE4-207ENST00000505054 ZNF410Q86VK4 478 aa18.69■□□□□ 0.58
SYNE4-207ENST00000505054 ADHFE1Q8IWW8 467 aa18.69■□□□□ 0.58
SYNE4-207ENST00000505054 MCPH1Q8NEM0 835 aa18.69■□□□□ 0.58
SYNE4-207ENST00000505054 LEO1Q8WVC0 666 aaPredicted RBP18.69■□□□□ 0.58
SYNE4-207ENST00000505054 NLRP4Q96MN2 994 aa18.69■□□□□ 0.58
SYNE4-207ENST00000505054 FDXACB1Q9BRP7 624 aaPredicted RBP18.69■□□□□ 0.58
SYNE4-207ENST00000505054 ERVK-5Q9HDB9 667 aa18.69■□□□□ 0.58
SYNE4-207ENST00000505054 ATP6V1DQ9Y5K8 247 aa18.69■□□□□ 0.58
SYNE4-207ENST00000505054 C19orf67A6NJJ6 358 aa18.68■□□□□ 0.58
SYNE4-207ENST00000505054 CUTAO60888 179 aa18.68■□□□□ 0.58
SYNE4-207ENST00000505054 RPS6KA5O75582 802 aa18.68■□□□□ 0.58
SYNE4-207ENST00000505054 PLA2G4BP0C869 781 aa18.68■□□□□ 0.58
SYNE4-207ENST00000505054 NCLP19338 710 aaKnown RBP18.68■□□□□ 0.58
SYNE4-207ENST00000505054 GLRA2P23416 452 aa18.68■□□□□ 0.58
SYNE4-207ENST00000505054 SLC12A3P55017 1021 aa18.68■□□□□ 0.58
SYNE4-207ENST00000505054 CDC42EP1Q00587 391 aa18.68■□□□□ 0.58
SYNE4-207ENST00000505054 SHC4Q6S5L8 630 aa18.68■□□□□ 0.58
SYNE4-207ENST00000505054 RASSF8Q8NHQ8 419 aa18.68■□□□□ 0.58
SYNE4-207ENST00000505054 LINC01599Q8WXQ3 324 aa18.68■□□□□ 0.58
SYNE4-207ENST00000505054 CLP1Q92989 425 aaKnown RBP18.68■□□□□ 0.58
SYNE4-207ENST00000505054 TMX1Q9H3N1 280 aa18.68■□□□□ 0.58
SYNE4-207ENST00000505054 IFT122Q9HBG6 1241 aa18.68■□□□□ 0.58
SYNE4-207ENST00000505054 PCDHA7Q9UN72 937 aa18.68■□□□□ 0.58
SYNE4-207ENST00000505054 RBM19Q9Y4C8 960 aaKnown RBP18.68■□□□□ 0.58
SYNE4-207ENST00000505054 A0A087X0B3 334 aa18.67■□□□□ 0.58
SYNE4-207ENST00000505054 CSDE1O75534 798 aaKnown RBP18.67■□□□□ 0.58
SYNE4-207ENST00000505054 BMPR1AP36894 532 aa18.67■□□□□ 0.58
SYNE4-207ENST00000505054 ME1P48163 572 aa18.67■□□□□ 0.58
SYNE4-207ENST00000505054 CAPSQ13938 189 aa18.67■□□□□ 0.58
SYNE4-207ENST00000505054 NAALADL2Q58DX5 795 aa18.67■□□□□ 0.58
SYNE4-207ENST00000505054 FAM102BQ5T8I3 360 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms