RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 BMP2KQ9NSY1 1161 aaPredicted RBP14.76□□□□□ -0.05
DDX41-204ENST00000504807 TMEM161AQ9NX61 479 aa14.76□□□□□ -0.05
DDX41-204ENST00000504807 RGL1Q9NZL6 768 aa14.76□□□□□ -0.05
DDX41-204ENST00000504807 LRFN2Q9ULH4 789 aa14.76□□□□□ -0.05
DDX41-204ENST00000504807 PCDHB7Q9Y5E2 793 aa14.76□□□□□ -0.05
DDX41-204ENST00000504807 A0A087WZ62 844 aa14.75□□□□□ -0.05
DDX41-204ENST00000504807 CCDC194A0A1B0GVG4 234 aa14.75□□□□□ -0.05
DDX41-204ENST00000504807 DDX11L8A8MPP1 907 aa14.75□□□□□ -0.05
DDX41-204ENST00000504807 BTBD18B2RXH4 712 aa14.75□□□□□ -0.05
DDX41-204ENST00000504807 CCNT1O60563 726 aaKnown RBP14.75□□□□□ -0.05
DDX41-204ENST00000504807 MAFO75444 373 aaPredicted RBP14.75□□□□□ -0.05
DDX41-204ENST00000504807 CDKL5O76039 1030 aa14.75□□□□□ -0.05
DDX41-204ENST00000504807 BRD1O95696 1058 aa14.75□□□□□ -0.05
DDX41-204ENST00000504807 NEK4P51957 841 aa14.75□□□□□ -0.05
DDX41-204ENST00000504807 ERVFC1P60507 584 aa14.75□□□□□ -0.05
DDX41-204ENST00000504807 TBC1D8BQ0IIM8 1120 aa14.75□□□□□ -0.05
DDX41-204ENST00000504807 MTMR3Q13615 1198 aa14.75□□□□□ -0.05
DDX41-204ENST00000504807 ST3GAL2Q16842 350 aa14.75□□□□□ -0.05
DDX41-204ENST00000504807 ERICH6BQ5W0A0 696 aa14.75□□□□□ -0.05
DDX41-204ENST00000504807 ZNF598Q86UK7 904 aaKnown RBP14.75□□□□□ -0.05
DDX41-204ENST00000504807 ECHDC2Q86YB7 292 aa14.75□□□□□ -0.05
DDX41-204ENST00000504807 FAM177A1Q8N128 213 aaPredicted RBP14.75□□□□□ -0.05
DDX41-204ENST00000504807 COLGALT1Q8NBJ5 622 aa14.75□□□□□ -0.05
DDX41-204ENST00000504807 SUSD6Q92537 303 aa14.75□□□□□ -0.05
DDX41-204ENST00000504807 MAP7D2Q96T17 732 aa14.75□□□□□ -0.05
DDX41-204ENST00000504807 FDXACB1Q9BRP7 624 aaPredicted RBP14.75□□□□□ -0.05
DDX41-204ENST00000504807 MFSD1Q9H3U5 465 aa14.75□□□□□ -0.05
DDX41-204ENST00000504807 TSHZ2Q9NRE2 1034 aa14.75□□□□□ -0.05
DDX41-204ENST00000504807 C1orf112Q9NSG2 853 aa14.75□□□□□ -0.05
DDX41-204ENST00000504807 PKD1L2Q7Z442 2459 aa14.75□□□□□ -0.05
DDX41-204ENST00000504807 A0A087WWV3 80 aa14.74□□□□□ -0.05
DDX41-204ENST00000504807 B4GALT3O60512 393 aa14.74□□□□□ -0.05
DDX41-204ENST00000504807 PSMC5P62195 406 aa14.74□□□□□ -0.05
DDX41-204ENST00000504807 LONRF3Q496Y0 759 aa14.74□□□□□ -0.05
DDX41-204ENST00000504807 NLRP7Q8WX94 980 aa14.74□□□□□ -0.05
DDX41-204ENST00000504807 DYDC2Q96IM9 177 aa14.74□□□□□ -0.05
DDX41-204ENST00000504807 HINFPQ9BQA5 517 aa14.74□□□□□ -0.05
DDX41-204ENST00000504807 APOL5Q9BWW9 433 aa14.74□□□□□ -0.05
DDX41-204ENST00000504807 MINDY3Q9H8M7 445 aa14.74□□□□□ -0.05
DDX41-204ENST00000504807 RALYQ9UKM9 306 aaKnown RBP14.74□□□□□ -0.05
DDX41-204ENST00000504807 MAP1BP46821 2468 aaKnown RBP14.74□□□□□ -0.05
DDX41-204ENST00000504807 ARID2Q68CP9 1835 aa14.73□□□□□ -0.05
DDX41-204ENST00000504807 PER2O15055 1255 aa14.73□□□□□ -0.05
DDX41-204ENST00000504807 FGF18O76093 207 aa14.73□□□□□ -0.05
DDX41-204ENST00000504807 LMNAP02545 664 aaKnown RBP14.73□□□□□ -0.05
DDX41-204ENST00000504807 CYP4A11Q02928 519 aa14.73□□□□□ -0.05
DDX41-204ENST00000504807 CTTNQ14247 550 aaKnown RBP14.73□□□□□ -0.05
DDX41-204ENST00000504807 C8orf34Q49A92 452 aa14.73□□□□□ -0.05
DDX41-204ENST00000504807 UBALD2Q8IYN6 164 aa14.73□□□□□ -0.05
DDX41-204ENST00000504807 LPPQ93052 612 aa14.73□□□□□ -0.05
DDX41-204ENST00000504807 FAM20AQ96MK3 541 aa14.73□□□□□ -0.05
DDX41-204ENST00000504807 ELAC1Q9H777 363 aaKnown RBP14.73□□□□□ -0.05
DDX41-204ENST00000504807 TLE6Q9H808 572 aa14.73□□□□□ -0.05
DDX41-204ENST00000504807 ATP6V0A4Q9HBG4 840 aa14.73□□□□□ -0.05
DDX41-204ENST00000504807 IFT122Q9HBG6 1241 aa14.73□□□□□ -0.05
DDX41-204ENST00000504807 CYP26B1Q9NR63 512 aa14.73□□□□□ -0.05
DDX41-204ENST00000504807 SUCLA2Q9P2R7 463 aaPredicted RBP14.73□□□□□ -0.05
DDX41-204ENST00000504807 FSCN2O14926 492 aa14.72□□□□□ -0.05
DDX41-204ENST00000504807 GCFC2P16383 781 aaKnown RBP14.72□□□□□ -0.05
DDX41-204ENST00000504807 TMOD1P28289 359 aa14.72□□□□□ -0.05
DDX41-204ENST00000504807 KRT2P35908 639 aa14.72□□□□□ -0.05
DDX41-204ENST00000504807 QARSP47897 775 aaKnown RBP14.72□□□□□ -0.05
DDX41-204ENST00000504807 AFF1P51825 1210 aaKnown RBP14.72□□□□□ -0.05
DDX41-204ENST00000504807 GUCY1B3Q02153 619 aa14.72□□□□□ -0.05
DDX41-204ENST00000504807 COL9A2Q14055 689 aaPredicted RBP14.72□□□□□ -0.05
DDX41-204ENST00000504807 ANKRD1Q15327 319 aa14.72□□□□□ -0.05
DDX41-204ENST00000504807 ANGPT1Q15389 498 aa14.72□□□□□ -0.05
DDX41-204ENST00000504807 NAALADL2Q58DX5 795 aa14.72□□□□□ -0.05
DDX41-204ENST00000504807 NCAPH2Q6IBW4 605 aa14.72□□□□□ -0.05
DDX41-204ENST00000504807 TMEM173Q86WV6 379 aaPredicted RBP14.72□□□□□ -0.05
DDX41-204ENST00000504807 RHPN2Q8IUC4 686 aa14.72□□□□□ -0.05
DDX41-204ENST00000504807 RNF169Q8NCN4 708 aa14.72□□□□□ -0.05
DDX41-204ENST00000504807 FLCNQ8NFG4 579 aa14.72□□□□□ -0.05
DDX41-204ENST00000504807 HELQQ8TDG4 1101 aa14.72□□□□□ -0.05
DDX41-204ENST00000504807 TMEM143Q96AN5 459 aa14.72□□□□□ -0.05
DDX41-204ENST00000504807 LXNQ9BS40 222 aa14.72□□□□□ -0.05
DDX41-204ENST00000504807 TMEM60Q9H2L4 133 aa14.72□□□□□ -0.05
DDX41-204ENST00000504807 DHX33Q9H6R0 707 aaKnown RBP14.72□□□□□ -0.05
DDX41-204ENST00000504807 XPNPEP1Q9NQW7 623 aa14.72□□□□□ -0.05
DDX41-204ENST00000504807 DLL3Q9NYJ7 618 aa14.72□□□□□ -0.05
DDX41-204ENST00000504807 SORCS3Q9UPU3 1222 aa14.72□□□□□ -0.05
DDX41-204ENST00000504807 USP24Q9UPU5 2620 aa14.71□□□□□ -0.05
DDX41-204ENST00000504807 A0A0U1RQF3 1178 aa14.71□□□□□ -0.05
DDX41-204ENST00000504807 SLITRK3O94933 977 aa14.71□□□□□ -0.05
DDX41-204ENST00000504807 CLCN5P51795 746 aa14.71□□□□□ -0.05
DDX41-204ENST00000504807 EPHA7Q15375 998 aa14.71□□□□□ -0.05
DDX41-204ENST00000504807 DIS3L2Q8IYB7 885 aaKnown RBP14.71□□□□□ -0.05
DDX41-204ENST00000504807 FEZF2Q8TBJ5 459 aa14.71□□□□□ -0.05
DDX41-204ENST00000504807 BCL7CQ8WUZ0 217 aaPredicted RBP14.71□□□□□ -0.05
DDX41-204ENST00000504807 NLRP4Q96MN2 994 aa14.71□□□□□ -0.05
DDX41-204ENST00000504807 SCLT1Q96NL6 688 aa14.71□□□□□ -0.05
DDX41-204ENST00000504807 TMEM117Q9H0C3 514 aa14.71□□□□□ -0.05
DDX41-204ENST00000504807 HIDE1A8MVS5 230 aa14.7□□□□□ -0.06
DDX41-204ENST00000504807 TBX3O15119 743 aa14.7□□□□□ -0.06
DDX41-204ENST00000504807 P4HBP07237 508 aaKnown RBP14.7□□□□□ -0.06
DDX41-204ENST00000504807 PHKA2P46019 1235 aa14.7□□□□□ -0.06
DDX41-204ENST00000504807 KCNC3Q14003 757 aa14.7□□□□□ -0.06
DDX41-204ENST00000504807 RSPO4Q2I0M5 234 aaPredicted RBP14.7□□□□□ -0.06
DDX41-204ENST00000504807 ODR4Q5SWX8 454 aa14.7□□□□□ -0.06
DDX41-204ENST00000504807 UBXN11Q5T124 520 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms