RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 LRRC8AQ8IWT6 810 aa11.13□□□□□ -0.63
DDX41-203ENST00000504781 CNOT6LQ96LI5 555 aaKnown RBP11.13□□□□□ -0.63
DDX41-203ENST00000504781 UNC93B1Q9H1C4 597 aa11.13□□□□□ -0.63
DDX41-203ENST00000504781 GPRC5CQ9NQ84 441 aa11.13□□□□□ -0.63
DDX41-203ENST00000504781 ZBTB42B2RXF5 422 aa11.12□□□□□ -0.63
DDX41-203ENST00000504781 K7ERI5 159 aa11.12□□□□□ -0.63
DDX41-203ENST00000504781 KIAA0391O15091 583 aaKnown RBP11.12□□□□□ -0.63
DDX41-203ENST00000504781 TEX33O43247 280 aa11.12□□□□□ -0.63
DDX41-203ENST00000504781 TFRCP02786 760 aaKnown RBP11.12□□□□□ -0.63
DDX41-203ENST00000504781 INHAP05111 366 aa11.12□□□□□ -0.63
DDX41-203ENST00000504781 GJB1P08034 283 aa11.12□□□□□ -0.63
DDX41-203ENST00000504781 MMP3P08254 477 aa11.12□□□□□ -0.63
DDX41-203ENST00000504781 INSRRP14616 1297 aa11.12□□□□□ -0.63
DDX41-203ENST00000504781 KLRC1P26715 233 aa11.12□□□□□ -0.63
DDX41-203ENST00000504781 TMOD1P28289 359 aa11.12□□□□□ -0.63
DDX41-203ENST00000504781 CNGA1P29973 690 aa11.12□□□□□ -0.63
DDX41-203ENST00000504781 KCNA1Q09470 495 aa11.12□□□□□ -0.63
DDX41-203ENST00000504781 CCDC40Q4G0X9 1142 aa11.12□□□□□ -0.63
DDX41-203ENST00000504781 HABP4Q5JVS0 413 aaKnown RBP11.12□□□□□ -0.63
DDX41-203ENST00000504781 FKBP15Q5T1M5 1219 aa11.12□□□□□ -0.63
DDX41-203ENST00000504781 SLFN12LQ6IEE8 588 aa11.12□□□□□ -0.63
DDX41-203ENST00000504781 EFCAB12Q6NXP0 572 aa11.12□□□□□ -0.63
DDX41-203ENST00000504781 TMC6Q7Z403 805 aa11.12□□□□□ -0.63
DDX41-203ENST00000504781 PPFIBP1Q86W92 1011 aa11.12□□□□□ -0.63
DDX41-203ENST00000504781 TRIM59Q8IWR1 403 aa11.12□□□□□ -0.63
DDX41-203ENST00000504781 ZNF710Q8N1W2 664 aa11.12□□□□□ -0.63
DDX41-203ENST00000504781 PSPC1Q8WXF1 523 aaKnown RBP11.12□□□□□ -0.63
DDX41-203ENST00000504781 TMEM143Q96AN5 459 aa11.12□□□□□ -0.63
DDX41-203ENST00000504781 ERGIC2Q96RQ1 377 aa11.12□□□□□ -0.63
DDX41-203ENST00000504781 POLR3FQ9H1D9 316 aaPredicted RBP11.12□□□□□ -0.63
DDX41-203ENST00000504781 NDST4Q9H3R1 872 aa11.12□□□□□ -0.63
DDX41-203ENST00000504781 AGPAT3Q9NRZ7 376 aa11.12□□□□□ -0.63
DDX41-203ENST00000504781 INTS13Q9NVM9 706 aa11.12□□□□□ -0.63
DDX41-203ENST00000504781 TAB2Q9NYJ8 693 aa11.12□□□□□ -0.63
DDX41-203ENST00000504781 ARHGAP28Q9P2N2 729 aa11.12□□□□□ -0.63
DDX41-203ENST00000504781 ARMCX3Q9UH62 379 aaPredicted RBP11.12□□□□□ -0.63
DDX41-203ENST00000504781 TRPC6Q9Y210 931 aa11.12□□□□□ -0.63
DDX41-203ENST00000504781 FRMD4BQ9Y2L6 1034 aa11.12□□□□□ -0.63
DDX41-203ENST00000504781 BRCA2P51587 3418 aa11.12□□□□□ -0.63
DDX41-203ENST00000504781 DENND3A2RUS2 1198 aa11.11□□□□□ -0.63
DDX41-203ENST00000504781 NRDCO43847 1150 aa11.11□□□□□ -0.63
DDX41-203ENST00000504781 TPM1P09493 284 aa11.11□□□□□ -0.63
DDX41-203ENST00000504781 EPB41P11171 864 aaKnown RBP11.11□□□□□ -0.63
DDX41-203ENST00000504781 GARTP22102 1010 aa11.11□□□□□ -0.63
DDX41-203ENST00000504781 GLRA2P23416 452 aa11.11□□□□□ -0.63
DDX41-203ENST00000504781 MARK3P27448 753 aa11.11□□□□□ -0.63
DDX41-203ENST00000504781 GJA8P48165 433 aa11.11□□□□□ -0.63
DDX41-203ENST00000504781 ENPEPQ07075 957 aa11.11□□□□□ -0.63
DDX41-203ENST00000504781 STRN3Q13033 797 aa11.11□□□□□ -0.63
DDX41-203ENST00000504781 TFDP1Q14186 410 aa11.11□□□□□ -0.63
DDX41-203ENST00000504781 FIGNQ5HY92 759 aa11.11□□□□□ -0.63
DDX41-203ENST00000504781 MIIPQ5JXC2 388 aa11.11□□□□□ -0.63
DDX41-203ENST00000504781 GJC2Q5T442 439 aaPredicted RBP11.11□□□□□ -0.63
DDX41-203ENST00000504781 ZSCAN30Q86W11 494 aa11.11□□□□□ -0.63
DDX41-203ENST00000504781 MAP4K3Q8IVH8 894 aa11.11□□□□□ -0.63
DDX41-203ENST00000504781 CCDC150Q8NCX0 1101 aa11.11□□□□□ -0.63
DDX41-203ENST00000504781 DEPTORQ8TB45 409 aa11.11□□□□□ -0.63
DDX41-203ENST00000504781 PXYLP1Q8TE99 480 aa11.11□□□□□ -0.63
DDX41-203ENST00000504781 U2AF1L4Q8WU68 220 aaKnown RBP11.11□□□□□ -0.63
DDX41-203ENST00000504781 PRPF31Q8WWY3 499 aaKnown RBP11.11□□□□□ -0.63
DDX41-203ENST00000504781 BSNDQ8WZ55 320 aa11.11□□□□□ -0.63
DDX41-203ENST00000504781 BORCS6Q96GS4 357 aa11.11□□□□□ -0.63
DDX41-203ENST00000504781 NFKBIZQ9BYH8 718 aa11.11□□□□□ -0.63
DDX41-203ENST00000504781 EDEM3Q9BZQ6 932 aa11.11□□□□□ -0.63
DDX41-203ENST00000504781 C2orf40Q9H1Z8 148 aa11.11□□□□□ -0.63
DDX41-203ENST00000504781 SPC25Q9HBM1 224 aa11.11□□□□□ -0.63
DDX41-203ENST00000504781 KIAA1586Q9HCI6 787 aa11.11□□□□□ -0.63
DDX41-203ENST00000504781 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.11□□□□□ -0.63
DDX41-203ENST00000504781 MKI67P46013 3256 aaKnown RBP11.11□□□□□ -0.63
DDX41-203ENST00000504781 NRCAMQ92823 1304 aa11.1□□□□□ -0.63
DDX41-203ENST00000504781 ARID2Q68CP9 1835 aa11.1□□□□□ -0.63
DDX41-203ENST00000504781 H0YGN5 161 aa11.1□□□□□ -0.63
DDX41-203ENST00000504781 HAS3O00219 553 aa11.1□□□□□ -0.63
DDX41-203ENST00000504781 CLIC2O15247 247 aa11.1□□□□□ -0.63
DDX41-203ENST00000504781 SEPT4O43236 478 aa11.1□□□□□ -0.63
DDX41-203ENST00000504781 ZEB2O60315 1214 aa11.1□□□□□ -0.63
DDX41-203ENST00000504781 SGPL1O95470 568 aa11.1□□□□□ -0.63
DDX41-203ENST00000504781 PIGRP01833 764 aa11.1□□□□□ -0.63
DDX41-203ENST00000504781 CYBAP13498 195 aa11.1□□□□□ -0.63
DDX41-203ENST00000504781 GJA9P57773 515 aa11.1□□□□□ -0.63
DDX41-203ENST00000504781 CEP135Q66GS9 1140 aa11.1□□□□□ -0.63
DDX41-203ENST00000504781 TLK2Q86UE8 772 aa11.1□□□□□ -0.63
DDX41-203ENST00000504781 KSR1Q8IVT5 923 aa11.1□□□□□ -0.63
DDX41-203ENST00000504781 XXYLT1Q8NBI6 393 aa11.1□□□□□ -0.63
DDX41-203ENST00000504781 CCDC51Q96ER9 411 aa11.1□□□□□ -0.63
DDX41-203ENST00000504781 EEF2KMTQ96G04 330 aa11.1□□□□□ -0.63
DDX41-203ENST00000504781 DEFB118Q96PH6 123 aa11.1□□□□□ -0.63
DDX41-203ENST00000504781 KATNAL1Q9BW62 490 aa11.1□□□□□ -0.63
DDX41-203ENST00000504781 SUGCTQ9HAC7 445 aa11.1□□□□□ -0.63
DDX41-203ENST00000504781 SUCLA2Q9P2R7 463 aaPredicted RBP11.1□□□□□ -0.63
DDX41-203ENST00000504781 ZKSCAN5Q9Y2L8 839 aa11.1□□□□□ -0.63
DDX41-203ENST00000504781 STYXL1Q9Y6J8 313 aa11.1□□□□□ -0.63
DDX41-203ENST00000504781 KAT6AQ92794 2004 aa11.09□□□□□ -0.63
DDX41-203ENST00000504781 AKR1B15C9JRZ8 316 aaPredicted RBP11.09□□□□□ -0.63
DDX41-203ENST00000504781 PES1O00541 588 aaKnown RBP11.09□□□□□ -0.63
DDX41-203ENST00000504781 ADCY6O43306 1168 aa11.09□□□□□ -0.63
DDX41-203ENST00000504781 EXOC3O60645 756 aa11.09□□□□□ -0.63
DDX41-203ENST00000504781 AKAP3O75969 853 aa11.09□□□□□ -0.63
DDX41-203ENST00000504781 C22orf31O95567 290 aa11.09□□□□□ -0.63
DDX41-203ENST00000504781 LDHAP00338 332 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms