RNA–Protein interactions for RNA: ENST00000504701.5

CDC42SE2-207, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-207ENST00000504701 NEMFO60524 1076 aa25.3■■□□□ 1.64
CDC42SE2-207ENST00000504701 DKC1O60832 514 aaKnown RBP eCLIP25.3■■□□□ 1.64
CDC42SE2-207ENST00000504701 RFC5P40937 340 aa25.3■■□□□ 1.64
CDC42SE2-207ENST00000504701 CDC42EP1Q00587 391 aa25.3■■□□□ 1.64
CDC42SE2-207ENST00000504701 PLCB3Q01970 1234 aa25.3■■□□□ 1.64
CDC42SE2-207ENST00000504701 TRIM29Q14134 588 aa25.3■■□□□ 1.64
CDC42SE2-207ENST00000504701 DUSP6Q16828 381 aa25.3■■□□□ 1.64
CDC42SE2-207ENST00000504701 ADHFE1Q8IWW8 467 aa25.3■■□□□ 1.64
CDC42SE2-207ENST00000504701 PSPC1Q8WXF1 523 aaKnown RBP25.3■■□□□ 1.64
CDC42SE2-207ENST00000504701 PPP2R3CQ969Q6 453 aa25.3■■□□□ 1.64
CDC42SE2-207ENST00000504701 HSD17B14Q9BPX1 270 aa25.3■■□□□ 1.64
CDC42SE2-207ENST00000504701 TCF25Q9BQ70 676 aa25.3■■□□□ 1.64
CDC42SE2-207ENST00000504701 JPH2Q9BR39 696 aaPredicted RBP25.3■■□□□ 1.64
CDC42SE2-207ENST00000504701 AGPAT5Q9NUQ2 364 aa25.3■■□□□ 1.64
CDC42SE2-207ENST00000504701 INPP5FQ9Y2H2 1132 aa25.3■■□□□ 1.64
CDC42SE2-207ENST00000504701 MCM7P33993 719 aa25.29■■□□□ 1.64
CDC42SE2-207ENST00000504701 AFF1P51825 1210 aaKnown RBP25.29■■□□□ 1.64
CDC42SE2-207ENST00000504701 BCAR1P56945 870 aa25.29■■□□□ 1.64
CDC42SE2-207ENST00000504701 FERMT3Q86UX7 667 aa25.29■■□□□ 1.64
CDC42SE2-207ENST00000504701 SLC39A11Q8N1S5 342 aa25.29■■□□□ 1.64
CDC42SE2-207ENST00000504701 RNF149Q8NC42 400 aa25.29■■□□□ 1.64
CDC42SE2-207ENST00000504701 ENTPD7Q9NQZ7 604 aa25.29■■□□□ 1.64
CDC42SE2-207ENST00000504701 CENPBP07199 599 aaPredicted RBP25.28■■□□□ 1.64
CDC42SE2-207ENST00000504701 HOXA11P31270 313 aaPredicted RBP25.28■■□□□ 1.64
CDC42SE2-207ENST00000504701 CSPP1Q1MSJ5 1256 aa25.28■■□□□ 1.64
CDC42SE2-207ENST00000504701 UBXN11Q5T124 520 aa25.28■■□□□ 1.64
CDC42SE2-207ENST00000504701 SMRP1Q8NCR6 262 aa25.28■■□□□ 1.64
CDC42SE2-207ENST00000504701 ASAP3Q8TDY4 903 aa25.28■■□□□ 1.64
CDC42SE2-207ENST00000504701 PIGOQ8TEQ8 1089 aa25.28■■□□□ 1.64
CDC42SE2-207ENST00000504701 BCL7CQ8WUZ0 217 aaPredicted RBP25.28■■□□□ 1.64
CDC42SE2-207ENST00000504701 MTRQ99707 1265 aa25.28■■□□□ 1.64
CDC42SE2-207ENST00000504701 TRAIPQ9BWF2 469 aa25.28■■□□□ 1.64
CDC42SE2-207ENST00000504701 INO80BQ9C086 356 aaPredicted RBP25.28■■□□□ 1.64
CDC42SE2-207ENST00000504701 SPG21Q9NZD8 308 aa25.28■■□□□ 1.64
CDC42SE2-207ENST00000504701 LZTS1Q9Y250 596 aa25.28■■□□□ 1.64
CDC42SE2-207ENST00000504701 ZC3H11AO75152 810 aaKnown RBP eCLIP25.27■■□□□ 1.64
CDC42SE2-207ENST00000504701 EYA4O95677 639 aa25.27■■□□□ 1.64
CDC42SE2-207ENST00000504701 TMEM31Q5JXX7 168 aa25.27■■□□□ 1.64
CDC42SE2-207ENST00000504701 LLGL2Q6P1M3 1020 aa25.27■■□□□ 1.64
CDC42SE2-207ENST00000504701 AGMOQ6ZNB7 445 aa25.27■■□□□ 1.64
CDC42SE2-207ENST00000504701 OTUD6AQ7L8S5 288 aa25.27■■□□□ 1.64
CDC42SE2-207ENST00000504701 C8orf76Q96K31 380 aa25.27■■□□□ 1.64
CDC42SE2-207ENST00000504701 APOL5Q9BWW9 433 aa25.27■■□□□ 1.64
CDC42SE2-207ENST00000504701 NRDE2Q9H7Z3 1164 aa25.27■■□□□ 1.64
CDC42SE2-207ENST00000504701 TBC1D13Q9NVG8 400 aa25.27■■□□□ 1.64
CDC42SE2-207ENST00000504701 DNAJB4Q9UDY4 337 aa25.27■■□□□ 1.64
CDC42SE2-207ENST00000504701 PRKAG3Q9UGI9 489 aa25.27■■□□□ 1.64
CDC42SE2-207ENST00000504701 FAM50BQ9Y247 325 aa25.27■■□□□ 1.64
CDC42SE2-207ENST00000504701 PCDHB2Q9Y5E7 798 aa25.27■■□□□ 1.64
CDC42SE2-207ENST00000504701 OFD1O75665 1012 aa25.26■■□□□ 1.63
CDC42SE2-207ENST00000504701 COASYQ13057 564 aa25.26■■□□□ 1.63
CDC42SE2-207ENST00000504701 KCNC3Q14003 757 aa25.26■■□□□ 1.63
CDC42SE2-207ENST00000504701 CDH22Q9UJ99 828 aa25.26■■□□□ 1.63
CDC42SE2-207ENST00000504701 USP15Q9Y4E8 981 aaPredicted RBP25.26■■□□□ 1.63
CDC42SE2-207ENST00000504701 PPME1Q9Y570 386 aa25.26■■□□□ 1.63
CDC42SE2-207ENST00000504701 LYPLA2O95372 231 aa25.25■■□□□ 1.63
CDC42SE2-207ENST00000504701 SPATA31C1P0DKV0 1188 aa25.25■■□□□ 1.63
CDC42SE2-207ENST00000504701 NBR1Q14596 966 aa25.25■■□□□ 1.63
CDC42SE2-207ENST00000504701 ZNF174Q15697 407 aa25.25■■□□□ 1.63
CDC42SE2-207ENST00000504701 NOMO2Q5JPE7 1267 aa25.25■■□□□ 1.63
CDC42SE2-207ENST00000504701 SRGAP1Q7Z6B7 1085 aa25.25■■□□□ 1.63
CDC42SE2-207ENST00000504701 ZNF280BQ86YH2 543 aa25.25■■□□□ 1.63
CDC42SE2-207ENST00000504701 AUTS2Q8WXX7 1259 aa25.25■■□□□ 1.63
CDC42SE2-207ENST00000504701 CPB2Q96IY4 423 aa25.25■■□□□ 1.63
CDC42SE2-207ENST00000504701 GBP3Q9H0R5 595 aa25.25■■□□□ 1.63
CDC42SE2-207ENST00000504701 ZNF623O75123 536 aa25.24■■□□□ 1.63
CDC42SE2-207ENST00000504701 MED24O75448 989 aa25.24■■□□□ 1.63
CDC42SE2-207ENST00000504701 PPM1AP35813 382 aa25.24■■□□□ 1.63
CDC42SE2-207ENST00000504701 RARRES1P49788 294 aa25.24■■□□□ 1.63
CDC42SE2-207ENST00000504701 CAPSQ13938 189 aa25.24■■□□□ 1.63
CDC42SE2-207ENST00000504701 TMC7Q7Z402 723 aa25.24■■□□□ 1.63
CDC42SE2-207ENST00000504701 TCP11Q8WWU5 503 aa25.24■■□□□ 1.63
CDC42SE2-207ENST00000504701 EIF2AQ9BY44 585 aaKnown RBP25.24■■□□□ 1.63
CDC42SE2-207ENST00000504701 MRPL9Q9BYD2 267 aaKnown RBP25.24■■□□□ 1.63
CDC42SE2-207ENST00000504701 GPRC5CQ9NQ84 441 aa25.24■■□□□ 1.63
CDC42SE2-207ENST00000504701 PUF60Q9UHX1 559 aaKnown RBP25.24■■□□□ 1.63
CDC42SE2-207ENST00000504701 USO1O60763 962 aaKnown RBP25.23■■□□□ 1.63
CDC42SE2-207ENST00000504701 GPR37L1O60883 481 aa25.23■■□□□ 1.63
CDC42SE2-207ENST00000504701 KRT17Q04695 432 aa25.23■■□□□ 1.63
CDC42SE2-207ENST00000504701 GLB1LQ6UWU2 654 aa25.23■■□□□ 1.63
CDC42SE2-207ENST00000504701 MAEAQ7L5Y9 396 aa25.23■■□□□ 1.63
CDC42SE2-207ENST00000504701 SMG8Q8ND04 991 aaKnown RBP25.23■■□□□ 1.63
CDC42SE2-207ENST00000504701 VN1R3Q9BXE9 311 aa25.23■■□□□ 1.63
CDC42SE2-207ENST00000504701 ANKEF1Q9NU02 776 aa25.23■■□□□ 1.63
CDC42SE2-207ENST00000504701 MUTYHQ9UIF7 546 aa25.23■■□□□ 1.63
CDC42SE2-207ENST00000504701 C2orf71A6NGG8 1288 aa25.22■■□□□ 1.63
CDC42SE2-207ENST00000504701 GAS2O43903 313 aaKnown RBP25.22■■□□□ 1.63
CDC42SE2-207ENST00000504701 TSPAN1O60635 241 aa25.22■■□□□ 1.63
CDC42SE2-207ENST00000504701 EIF5BO60841 1220 aaKnown RBP25.22■■□□□ 1.63
CDC42SE2-207ENST00000504701 DDHD2O94830 711 aa25.22■■□□□ 1.63
CDC42SE2-207ENST00000504701 GALTP07902 379 aa25.22■■□□□ 1.63
CDC42SE2-207ENST00000504701 GLRA2P23416 452 aa25.22■■□□□ 1.63
CDC42SE2-207ENST00000504701 TECP42680 631 aa25.22■■□□□ 1.63
CDC42SE2-207ENST00000504701 SLC11A1P49279 550 aa25.22■■□□□ 1.63
CDC42SE2-207ENST00000504701 RAB27AP51159 221 aa25.22■■□□□ 1.63
CDC42SE2-207ENST00000504701 PTENP60484 403 aa25.22■■□□□ 1.63
CDC42SE2-207ENST00000504701 PDE12Q6L8Q7 609 aaKnown RBP25.22■■□□□ 1.63
CDC42SE2-207ENST00000504701 EXOC8Q8IYI6 725 aa25.22■■□□□ 1.63
CDC42SE2-207ENST00000504701 LLPHQ9BRT6 129 aaKnown RBP25.22■■□□□ 1.63
CDC42SE2-207ENST00000504701 RNF39Q9H2S5 420 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms