RNA–Protein interactions for RNA: ENST00000504487.5

CCDC149-204, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC149, Length 3,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-204ENST00000504487 ARHGAP27Q6ZUM4 889 aa9.26□□□□□ -0.93
CCDC149-204ENST00000504487 SYN2Q92777 582 aaPredicted RBP9.26□□□□□ -0.93
CCDC149-204ENST00000504487 GJA10Q969M2 543 aa9.26□□□□□ -0.93
CCDC149-204ENST00000504487 RNPEPL1Q9HAU8 725 aa9.26□□□□□ -0.93
CCDC149-204ENST00000504487 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.26□□□□□ -0.93
CCDC149-204ENST00000504487 ADAM22Q9P0K1 906 aa9.26□□□□□ -0.93
CCDC149-204ENST00000504487 PCDHA12Q9UN75 941 aa9.26□□□□□ -0.93
CCDC149-204ENST00000504487 KIAA1024Q9UPX6 916 aa9.26□□□□□ -0.93
CCDC149-204ENST00000504487 SETD1AO15047 1707 aaKnown RBP9.25□□□□□ -0.93
CCDC149-204ENST00000504487 MON2Q7Z3U7 1717 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 TCRBV5S4A2TA0A5A2 114 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 WDR91A4D1P6 747 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 CALUO43852 315 aaPredicted RBP9.25□□□□□ -0.93
CCDC149-204ENST00000504487 BBOX1O75936 387 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 GAS8O95995 478 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 UBTFL6P0CB48 400 aaPredicted RBP9.25□□□□□ -0.93
CCDC149-204ENST00000504487 RARAP10276 462 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 COASYQ13057 564 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 TMEM132AQ24JP5 1023 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 NIM1KQ8IY84 436 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 SYCP3Q8IZU3 236 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 ARHGAP24Q8N264 748 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 ZNF277Q9NRM2 450 aaPredicted RBP9.25□□□□□ -0.93
CCDC149-204ENST00000504487 SUCLA2Q9P2R7 463 aaPredicted RBP9.25□□□□□ -0.93
CCDC149-204ENST00000504487 CLIC2O15247 247 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 LRRN2O75325 713 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 SPAG7O75391 227 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 GCNT3O95395 438 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 FESP07332 822 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 UCHL3P15374 230 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 CA4P22748 312 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 HMGB2P26583 209 aaKnown RBP9.25□□□□□ -0.93
CCDC149-204ENST00000504487 KCNJ1P48048 391 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 SNAP25P60880 206 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 CCDC174Q6PII3 467 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 USP17L2Q6R6M4 530 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 EPM2AIP1Q7L775 607 aaPredicted RBP9.25□□□□□ -0.93
CCDC149-204ENST00000504487 ZNF571Q7Z3V5 609 aaPredicted RBP9.25□□□□□ -0.93
CCDC149-204ENST00000504487 RDH13Q8NBN7 331 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.25□□□□□ -0.93
CCDC149-204ENST00000504487 MIPOL1Q8TD10 442 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 STK32AQ8WU08 396 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 EZH1Q92800 747 aaPredicted RBP9.25□□□□□ -0.93
CCDC149-204ENST00000504487 CYTH2Q99418 400 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 ZFP69BQ9UJL9 534 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 DCTN4Q9UJW0 460 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 SPATA31A6Q5VVP1 1343 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 PNPLA7Q6ZV29 1317 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 IRF6O14896 467 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 NKRFO15226 690 aaKnown RBP eCLIP9.25□□□□□ -0.93
CCDC149-204ENST00000504487 GYG2O15488 501 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 PCP11498 1178 aaKnown RBP9.25□□□□□ -0.93
CCDC149-204ENST00000504487 CHRNA3P32297 505 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 CETN2P41208 172 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 MMP13P45452 471 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 RAB27AP51159 221 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 RNASELQ05823 741 aaKnown RBP9.25□□□□□ -0.93
CCDC149-204ENST00000504487 CNGA2Q16280 664 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 SLC35G2Q8TBE7 412 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 MAIP1Q8WWC4 291 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 GRAMD1AQ96CP6 724 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 L3MBTL3Q96JM7 780 aaPredicted RBP9.25□□□□□ -0.93
CCDC149-204ENST00000504487 CEP63Q96MT8 703 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 VPS37BQ9H9H4 285 aa9.25□□□□□ -0.93
CCDC149-204ENST00000504487 METTL5Q9NRN9 209 aaKnown RBP9.25□□□□□ -0.93
CCDC149-204ENST00000504487 H0YGN5 161 aa9.24□□□□□ -0.93
CCDC149-204ENST00000504487 O00370 1275 aa9.24□□□□□ -0.93
CCDC149-204ENST00000504487 LIN7AO14910 233 aaPredicted RBP9.24□□□□□ -0.93
CCDC149-204ENST00000504487 LCA5LO95447 670 aa9.24□□□□□ -0.93
CCDC149-204ENST00000504487 ZCCHC18P0CG32 403 aa9.24□□□□□ -0.93
CCDC149-204ENST00000504487 HSPA6P17066 643 aa9.24□□□□□ -0.93
CCDC149-204ENST00000504487 MKRN3Q13064 507 aaKnown RBP9.24□□□□□ -0.93
CCDC149-204ENST00000504487 DNAJC3Q13217 504 aa9.24□□□□□ -0.93
CCDC149-204ENST00000504487 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.24□□□□□ -0.93
CCDC149-204ENST00000504487 SH2D4BQ5SQS7 431 aa9.24□□□□□ -0.93
CCDC149-204ENST00000504487 RNF220Q5VTB9 566 aa9.24□□□□□ -0.93
CCDC149-204ENST00000504487 HGSNATQ68CP4 663 aa9.24□□□□□ -0.93
CCDC149-204ENST00000504487 PIGWQ7Z7B1 504 aa9.24□□□□□ -0.93
CCDC149-204ENST00000504487 SLC51AQ86UW1 340 aa9.24□□□□□ -0.93
CCDC149-204ENST00000504487 C18orf8Q96DM3 657 aa9.24□□□□□ -0.93
CCDC149-204ENST00000504487 SPZ1Q9BXG8 430 aa9.24□□□□□ -0.93
CCDC149-204ENST00000504487 ARHGEF10LQ9HCE6 1279 aa9.24□□□□□ -0.93
CCDC149-204ENST00000504487 NFS1Q9Y697 457 aa9.24□□□□□ -0.93
CCDC149-204ENST00000504487 PIK3C2AO00443 1686 aa9.24□□□□□ -0.93
CCDC149-204ENST00000504487 SPDYE5A6NIY4 337 aa9.24□□□□□ -0.93
CCDC149-204ENST00000504487 PPFIA2O75334 1257 aa9.24□□□□□ -0.93
CCDC149-204ENST00000504487 ATF2P15336 505 aa9.24□□□□□ -0.93
CCDC149-204ENST00000504487 PEX5P50542 639 aa9.24□□□□□ -0.93
CCDC149-204ENST00000504487 MAPK7Q13164 816 aa9.24□□□□□ -0.93
CCDC149-204ENST00000504487 TNIP1Q15025 636 aa9.24□□□□□ -0.93
CCDC149-204ENST00000504487 R3HDM1Q15032 1099 aaKnown RBP9.24□□□□□ -0.93
CCDC149-204ENST00000504487 SGO2Q562F6 1265 aa9.24□□□□□ -0.93
CCDC149-204ENST00000504487 PHLDB2Q86SQ0 1253 aa9.24□□□□□ -0.93
CCDC149-204ENST00000504487 RAD54LQ92698 747 aa9.24□□□□□ -0.93
CCDC149-204ENST00000504487 ZNF512BQ96KM6 892 aaPredicted RBP9.24□□□□□ -0.93
CCDC149-204ENST00000504487 ANKRD27Q96NW4 1050 aa9.24□□□□□ -0.93
CCDC149-204ENST00000504487 TDRD3Q9H7E2 651 aaKnown RBP9.24□□□□□ -0.93
CCDC149-204ENST00000504487 SUDS3Q9H7L9 328 aaPredicted RBP9.24□□□□□ -0.93
CCDC149-204ENST00000504487 OSGEPQ9NPF4 335 aa9.24□□□□□ -0.93
CCDC149-204ENST00000504487 SH3GLB2Q9NR46 395 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms