RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 VPS72Q15906 364 aa19.21■□□□□ 0.67
POLR2J3-209ENST00000504157 DAAM2Q86T65 1068 aa19.21■□□□□ 0.67
POLR2J3-209ENST00000504157 EXOC3L1Q86VI1 746 aa19.21■□□□□ 0.67
POLR2J3-209ENST00000504157 GLIS3Q8NEA6 775 aa19.21■□□□□ 0.67
POLR2J3-209ENST00000504157 EPS8L3Q8TE67 593 aaKnown RBP19.21■□□□□ 0.67
POLR2J3-209ENST00000504157 NCSTNQ92542 709 aa19.21■□□□□ 0.67
POLR2J3-209ENST00000504157 RASGRF2O14827 1237 aa19.2■□□□□ 0.66
POLR2J3-209ENST00000504157 CYP2D6P10635 497 aa19.2■□□□□ 0.66
POLR2J3-209ENST00000504157 TPP2P29144 1249 aaPredicted RBP19.2■□□□□ 0.66
POLR2J3-209ENST00000504157 NAPAP54920 295 aa19.2■□□□□ 0.66
POLR2J3-209ENST00000504157 TFAP4Q01664 338 aa19.2■□□□□ 0.66
POLR2J3-209ENST00000504157 SUSD4Q5VX71 490 aa19.2■□□□□ 0.66
POLR2J3-209ENST00000504157 ZDHHC24Q6UX98 284 aa19.2■□□□□ 0.66
POLR2J3-209ENST00000504157 PPP4R3CPQ6ZMV5 832 aa19.2■□□□□ 0.66
POLR2J3-209ENST00000504157 ECHDC2Q86YB7 292 aa19.2■□□□□ 0.66
POLR2J3-209ENST00000504157 MIPOL1Q8TD10 442 aa19.2■□□□□ 0.66
POLR2J3-209ENST00000504157 ZNF526Q8TF50 670 aaPredicted RBP19.2■□□□□ 0.66
POLR2J3-209ENST00000504157 NAP1L3Q99457 506 aaPredicted RBP19.2■□□□□ 0.66
POLR2J3-209ENST00000504157 TMCO1Q9UM00 188 aa19.2■□□□□ 0.66
POLR2J3-209ENST00000504157 SLC4A7Q9Y6M7 1214 aa19.2■□□□□ 0.66
POLR2J3-209ENST00000504157 LAMB2P55268 1798 aa19.2■□□□□ 0.66
POLR2J3-209ENST00000504157 ESYT2A0FGR8 921 aa19.2■□□□□ 0.66
POLR2J3-209ENST00000504157 RASA1P20936 1047 aa19.2■□□□□ 0.66
POLR2J3-209ENST00000504157 GSTT1P30711 240 aa19.2■□□□□ 0.66
POLR2J3-209ENST00000504157 DHX34Q14147 1143 aaKnown RBP19.2■□□□□ 0.66
POLR2J3-209ENST00000504157 LRRC14Q15048 493 aa19.2■□□□□ 0.66
POLR2J3-209ENST00000504157 CALCRLQ16602 461 aa19.2■□□□□ 0.66
POLR2J3-209ENST00000504157 FAM26FQ5R3K3 315 aa19.2■□□□□ 0.66
POLR2J3-209ENST00000504157 LCA5Q86VQ0 697 aa19.2■□□□□ 0.66
POLR2J3-209ENST00000504157 ARHGAP18Q8N392 663 aa19.2■□□□□ 0.66
POLR2J3-209ENST00000504157 SUPT20HQ8NEM7 779 aa19.2■□□□□ 0.66
POLR2J3-209ENST00000504157 TBCKQ8TEA7 893 aa19.2■□□□□ 0.66
POLR2J3-209ENST00000504157 DCLRE1BQ9H816 532 aa19.2■□□□□ 0.66
POLR2J3-209ENST00000504157 NMRK1Q9NWW6 199 aa19.2■□□□□ 0.66
POLR2J3-209ENST00000504157 USP20Q9Y2K6 914 aa19.2■□□□□ 0.66
POLR2J3-209ENST00000504157 DAAM1Q9Y4D1 1078 aa19.2■□□□□ 0.66
POLR2J3-209ENST00000504157 ROBO3Q96MS0 1386 aa19.19■□□□□ 0.66
POLR2J3-209ENST00000504157 ECE2O60344 883 aa19.19■□□□□ 0.66
POLR2J3-209ENST00000504157 GFPT2O94808 682 aa19.19■□□□□ 0.66
POLR2J3-209ENST00000504157 EYA4O95677 639 aa19.19■□□□□ 0.66
POLR2J3-209ENST00000504157 H2AFZP0C0S5 128 aa19.19■□□□□ 0.66
POLR2J3-209ENST00000504157 TXKP42681 527 aa19.19■□□□□ 0.66
POLR2J3-209ENST00000504157 GYG1P46976 350 aa19.19■□□□□ 0.66
POLR2J3-209ENST00000504157 DR1Q01658 176 aa19.19■□□□□ 0.66
POLR2J3-209ENST00000504157 OCRLQ01968 901 aa19.19■□□□□ 0.66
POLR2J3-209ENST00000504157 CGB2Q6NT52 195 aa19.19■□□□□ 0.66
POLR2J3-209ENST00000504157 H2AFVQ71UI9 128 aa19.19■□□□□ 0.66
POLR2J3-209ENST00000504157 GRAMD1AQ96CP6 724 aa19.19■□□□□ 0.66
POLR2J3-209ENST00000504157 CCDC113Q9H0I3 377 aa19.19■□□□□ 0.66
POLR2J3-209ENST00000504157 VCX3BQ9H321 246 aa19.19■□□□□ 0.66
POLR2J3-209ENST00000504157 MMADHCQ9H3L0 296 aaPredicted RBP19.19■□□□□ 0.66
POLR2J3-209ENST00000504157 SEMA4AQ9H3S1 761 aa19.19■□□□□ 0.66
POLR2J3-209ENST00000504157 OCEL1Q9H607 264 aa19.19■□□□□ 0.66
POLR2J3-209ENST00000504157 VCX3AQ9NNX9 186 aa19.19■□□□□ 0.66
POLR2J3-209ENST00000504157 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.19■□□□□ 0.66
POLR2J3-209ENST00000504157 PDP2Q9P2J9 529 aa19.19■□□□□ 0.66
POLR2J3-209ENST00000504157 SMCO2A6NFE2 343 aa19.19■□□□□ 0.66
POLR2J3-209ENST00000504157 VHLP40337 213 aa19.19■□□□□ 0.66
POLR2J3-209ENST00000504157 CACNA2D1P54289 1103 aa19.19■□□□□ 0.66
POLR2J3-209ENST00000504157 PLTPP55058 493 aa19.19■□□□□ 0.66
POLR2J3-209ENST00000504157 RNASELQ05823 741 aaKnown RBP19.19■□□□□ 0.66
POLR2J3-209ENST00000504157 EDRF1Q3B7T1 1238 aa19.19■□□□□ 0.66
POLR2J3-209ENST00000504157 ROPN1BQ9BZX4 212 aaPredicted RBP19.19■□□□□ 0.66
POLR2J3-209ENST00000504157 ROPN1Q9HAT0 212 aaPredicted RBP19.19■□□□□ 0.66
POLR2J3-209ENST00000504157 STOML1Q9UBI4 398 aa19.19■□□□□ 0.66
POLR2J3-209ENST00000504157 SEC63Q9UGP8 760 aaKnown RBP19.19■□□□□ 0.66
POLR2J3-209ENST00000504157 DBR1Q9UK59 544 aaKnown RBP19.19■□□□□ 0.66
POLR2J3-209ENST00000504157 TMEM120BA0PK00 339 aa19.18■□□□□ 0.66
POLR2J3-209ENST00000504157 SKIP12755 728 aa19.18■□□□□ 0.66
POLR2J3-209ENST00000504157 SCNN1BP51168 640 aa19.18■□□□□ 0.66
POLR2J3-209ENST00000504157 ACBD5Q5T8D3 534 aaPredicted RBP19.18■□□□□ 0.66
POLR2J3-209ENST00000504157 KRT79Q5XKE5 535 aa19.18■□□□□ 0.66
POLR2J3-209ENST00000504157 VPS36Q86VN1 386 aa19.18■□□□□ 0.66
POLR2J3-209ENST00000504157 FBXO25Q8TCJ0 367 aa19.18■□□□□ 0.66
POLR2J3-209ENST00000504157 KCTD10Q9H3F6 313 aa19.18■□□□□ 0.66
POLR2J3-209ENST00000504157 AMFRQ9UKV5 643 aa19.18■□□□□ 0.66
POLR2J3-209ENST00000504157 PCDHA2Q9Y5H9 948 aa19.18■□□□□ 0.66
POLR2J3-209ENST00000504157 MAGEA13PA6NCF6 341 aa19.17■□□□□ 0.66
POLR2J3-209ENST00000504157 UCHL3P15374 230 aa19.17■□□□□ 0.66
POLR2J3-209ENST00000504157 SMARCA1P28370 1054 aa19.17■□□□□ 0.66
POLR2J3-209ENST00000504157 EPS15P42566 896 aa19.17■□□□□ 0.66
POLR2J3-209ENST00000504157 SLCO1A2P46721 670 aa19.17■□□□□ 0.66
POLR2J3-209ENST00000504157 MTFR1Q15390 333 aa19.17■□□□□ 0.66
POLR2J3-209ENST00000504157 FAM98CQ17RN3 349 aaKnown RBP19.17■□□□□ 0.66
POLR2J3-209ENST00000504157 CAVIN4Q5BKX8 364 aa19.17■□□□□ 0.66
POLR2J3-209ENST00000504157 KIAA1755Q5JYT7 1200 aa19.17■□□□□ 0.66
POLR2J3-209ENST00000504157 SYCP3Q8IZU3 236 aa19.17■□□□□ 0.66
POLR2J3-209ENST00000504157 MGARPQ8TDB4 240 aa19.17■□□□□ 0.66
POLR2J3-209ENST00000504157 GATA6Q92908 595 aa19.17■□□□□ 0.66
POLR2J3-209ENST00000504157 RBM17Q96I25 401 aaKnown RBP19.17■□□□□ 0.66
POLR2J3-209ENST00000504157 CARD9Q9H257 536 aa19.17■□□□□ 0.66
POLR2J3-209ENST00000504157 NR2E1Q9Y466 385 aa19.17■□□□□ 0.66
POLR2J3-209ENST00000504157 NCANO14594 1321 aa19.17■□□□□ 0.66
POLR2J3-209ENST00000504157 KIAA0391O15091 583 aaKnown RBP19.17■□□□□ 0.66
POLR2J3-209ENST00000504157 TJP3O95049 919 aa19.17■□□□□ 0.66
POLR2J3-209ENST00000504157 FGGP02679 453 aa19.17■□□□□ 0.66
POLR2J3-209ENST00000504157 MECOMQ03112 1051 aa19.17■□□□□ 0.66
POLR2J3-209ENST00000504157 KCNH2Q12809 1159 aa19.17■□□□□ 0.66
POLR2J3-209ENST00000504157 SFSWAPQ12872 951 aaKnown RBP19.17■□□□□ 0.66
POLR2J3-209ENST00000504157 RCN2Q14257 317 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms