RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 CYP4A11Q02928 519 aa13.35□□□□□ -0.27
MED28-203ENST00000503945 NCBP1Q09161 790 aaKnown RBP13.35□□□□□ -0.27
MED28-203ENST00000503945 BMS1Q14692 1282 aaKnown RBP13.35□□□□□ -0.27
MED28-203ENST00000503945 KCNT2Q6UVM3 1135 aa13.35□□□□□ -0.27
MED28-203ENST00000503945 LRRC55Q6ZSA7 311 aa13.35□□□□□ -0.27
MED28-203ENST00000503945 SRGAP1Q7Z6B7 1085 aa13.35□□□□□ -0.27
MED28-203ENST00000503945 ZNF579Q8NAF0 562 aaKnown RBP13.35□□□□□ -0.27
MED28-203ENST00000503945 COLGALT1Q8NBJ5 622 aa13.35□□□□□ -0.27
MED28-203ENST00000503945 PSPC1Q8WXF1 523 aaKnown RBP13.35□□□□□ -0.27
MED28-203ENST00000503945 TMEM143Q96AN5 459 aa13.35□□□□□ -0.27
MED28-203ENST00000503945 HSD17B14Q9BPX1 270 aa13.35□□□□□ -0.27
MED28-203ENST00000503945 EIF2AK1Q9BQI3 630 aaKnown RBP13.35□□□□□ -0.27
MED28-203ENST00000503945 TRAIPQ9BWF2 469 aa13.35□□□□□ -0.27
MED28-203ENST00000503945 DHX33Q9H6R0 707 aaKnown RBP13.35□□□□□ -0.27
MED28-203ENST00000503945 TLR9Q9NR96 1032 aa13.35□□□□□ -0.27
MED28-203ENST00000503945 SPG21Q9NZD8 308 aa13.35□□□□□ -0.27
MED28-203ENST00000503945 LZTS1Q9Y250 596 aa13.35□□□□□ -0.27
MED28-203ENST00000503945 COL4A3BPQ9Y5P4 624 aa13.35□□□□□ -0.27
MED28-203ENST00000503945 ZBTB39O15060 712 aa13.34□□□□□ -0.27
MED28-203ENST00000503945 GAS2O43903 313 aaKnown RBP13.34□□□□□ -0.27
MED28-203ENST00000503945 NEMFO60524 1076 aa13.34□□□□□ -0.27
MED28-203ENST00000503945 ZNF623O75123 536 aa13.34□□□□□ -0.27
MED28-203ENST00000503945 GLP2RO95838 553 aa13.34□□□□□ -0.27
MED28-203ENST00000503945 XRCC6P12956 609 aaKnown RBP eCLIP13.34□□□□□ -0.27
MED28-203ENST00000503945 PHKA2P46019 1235 aa13.34□□□□□ -0.27
MED28-203ENST00000503945 LAMTOR4Q0VGL1 99 aa13.34□□□□□ -0.27
MED28-203ENST00000503945 COASYQ13057 564 aa13.34□□□□□ -0.27
MED28-203ENST00000503945 MXD4Q14582 209 aaPredicted RBP13.34□□□□□ -0.27
MED28-203ENST00000503945 ZNF598Q86UK7 904 aaKnown RBP13.34□□□□□ -0.27
MED28-203ENST00000503945 LRRC43Q8N309 656 aa13.34□□□□□ -0.27
MED28-203ENST00000503945 FAM184AQ8NB25 1140 aa13.34□□□□□ -0.27
MED28-203ENST00000503945 RSPH1Q8WYR4 309 aa13.34□□□□□ -0.27
MED28-203ENST00000503945 MRPS27Q92552 414 aaKnown RBP13.34□□□□□ -0.27
MED28-203ENST00000503945 PGBD4Q96DM1 585 aa13.34□□□□□ -0.27
MED28-203ENST00000503945 C8orf76Q96K31 380 aa13.34□□□□□ -0.27
MED28-203ENST00000503945 ZNF558Q96NG5 402 aa13.34□□□□□ -0.27
MED28-203ENST00000503945 IFT122Q9HBG6 1241 aa13.34□□□□□ -0.27
MED28-203ENST00000503945 ANKEF1Q9NU02 776 aa13.34□□□□□ -0.27
MED28-203ENST00000503945 WRAP73Q9P2S5 460 aaPredicted RBP13.34□□□□□ -0.27
MED28-203ENST00000503945 BARX2Q9UMQ3 279 aaPredicted RBP13.34□□□□□ -0.27
MED28-203ENST00000503945 PIN4Q9Y237 131 aaKnown RBP13.34□□□□□ -0.27
MED28-203ENST00000503945 MYH9P35579 1960 aaKnown RBP13.34□□□□□ -0.27
MED28-203ENST00000503945 FSD2A1L4K1 749 aa13.33□□□□□ -0.28
MED28-203ENST00000503945 CARNS1A5YM72 827 aa13.33□□□□□ -0.28
MED28-203ENST00000503945 LOC730098B7Z3J9 87 aa13.33□□□□□ -0.28
MED28-203ENST00000503945 PER2O15055 1255 aa13.33□□□□□ -0.28
MED28-203ENST00000503945 MCM7P33993 719 aa13.33□□□□□ -0.28
MED28-203ENST00000503945 PPM1AP35813 382 aa13.33□□□□□ -0.28
MED28-203ENST00000503945 RBM25P49756 843 aaKnown RBP13.33□□□□□ -0.28
MED28-203ENST00000503945 ERVFC1P60507 584 aa13.33□□□□□ -0.28
MED28-203ENST00000503945 HMGN5P82970 282 aaKnown RBP13.33□□□□□ -0.28
MED28-203ENST00000503945 GUCY1B3Q02153 619 aa13.33□□□□□ -0.28
MED28-203ENST00000503945 SPIRE1Q08AE8 756 aa13.33□□□□□ -0.28
MED28-203ENST00000503945 GNL2Q13823 731 aaKnown RBP13.33□□□□□ -0.28
MED28-203ENST00000503945 CLLU1OSQ5K130 101 aa13.33□□□□□ -0.28
MED28-203ENST00000503945 IER5LQ5T953 404 aa13.33□□□□□ -0.28
MED28-203ENST00000503945 TMC7Q7Z402 723 aa13.33□□□□□ -0.28
MED28-203ENST00000503945 CCDC83Q8IWF9 413 aa13.33□□□□□ -0.28
MED28-203ENST00000503945 RNF149Q8NC42 400 aa13.33□□□□□ -0.28
MED28-203ENST00000503945 SMRP1Q8NCR6 262 aa13.33□□□□□ -0.28
MED28-203ENST00000503945 HELQQ8TDG4 1101 aa13.33□□□□□ -0.28
MED28-203ENST00000503945 CCDC43Q96MW1 224 aaKnown RBP13.33□□□□□ -0.28
MED28-203ENST00000503945 MTMR9Q96QG7 549 aa13.33□□□□□ -0.28
MED28-203ENST00000503945 PHOX2BQ99453 314 aa13.33□□□□□ -0.28
MED28-203ENST00000503945 CDCA3Q99618 268 aaPredicted RBP13.33□□□□□ -0.28
MED28-203ENST00000503945 MTRQ99707 1265 aa13.33□□□□□ -0.28
MED28-203ENST00000503945 MRPL9Q9BYD2 267 aaKnown RBP13.33□□□□□ -0.28
MED28-203ENST00000503945 NGRNQ9NPE2 291 aaKnown RBP13.33□□□□□ -0.28
MED28-203ENST00000503945 SH2B1Q9NRF2 756 aaPredicted RBP13.33□□□□□ -0.28
MED28-203ENST00000503945 FAM105AQ9NUU6 356 aa13.33□□□□□ -0.28
MED28-203ENST00000503945 RNF19AQ9NV58 838 aa13.33□□□□□ -0.28
MED28-203ENST00000503945 TMEM221A6NGB7 291 aa13.32□□□□□ -0.28
MED28-203ENST00000503945 M0R296 226 aa13.32□□□□□ -0.28
MED28-203ENST00000503945 DGAT1O75907 488 aa13.32□□□□□ -0.28
MED28-203ENST00000503945 LYPLA2O95372 231 aa13.32□□□□□ -0.28
MED28-203ENST00000503945 RAB27AP51159 221 aa13.32□□□□□ -0.28
MED28-203ENST00000503945 ZXDAP98168 799 aa13.32□□□□□ -0.28
MED28-203ENST00000503945 RBM10P98175 930 aaKnown RBP13.32□□□□□ -0.28
MED28-203ENST00000503945 TFDP1Q14186 410 aa13.32□□□□□ -0.28
MED28-203ENST00000503945 EMC2Q15006 297 aa13.32□□□□□ -0.28
MED28-203ENST00000503945 PCBP1Q15365 356 aaKnown RBP eCLIP13.32□□□□□ -0.28
MED28-203ENST00000503945 LONRF3Q496Y0 759 aa13.32□□□□□ -0.28
MED28-203ENST00000503945 GLB1LQ6UWU2 654 aa13.32□□□□□ -0.28
MED28-203ENST00000503945 TRIM67Q6ZTA4 783 aa13.32□□□□□ -0.28
MED28-203ENST00000503945 BMP8AQ7Z5Y6 402 aa13.32□□□□□ -0.28
MED28-203ENST00000503945 FERMT3Q86UX7 667 aa13.32□□□□□ -0.28
MED28-203ENST00000503945 FBXO18Q8NFZ0 1043 aa13.32□□□□□ -0.28
MED28-203ENST00000503945 PBXIP1Q96AQ6 731 aa13.32□□□□□ -0.28
MED28-203ENST00000503945 FOXP1Q9H334 677 aaPredicted RBP13.32□□□□□ -0.28
MED28-203ENST00000503945 ENTPD7Q9NQZ7 604 aa13.32□□□□□ -0.28
MED28-203ENST00000503945 BMP2KQ9NSY1 1161 aaPredicted RBP13.32□□□□□ -0.28
MED28-203ENST00000503945 KANSL3Q9P2N6 904 aa13.32□□□□□ -0.28
MED28-203ENST00000503945 HCSTQ9UBK5 93 aa13.32□□□□□ -0.28
MED28-203ENST00000503945 USP15Q9Y4E8 981 aaPredicted RBP13.32□□□□□ -0.28
MED28-203ENST00000503945 PCDHB2Q9Y5E7 798 aa13.32□□□□□ -0.28
MED28-203ENST00000503945 MYO10Q9HD67 2058 aa13.32□□□□□ -0.28
MED28-203ENST00000503945 WDR81Q562E7 1941 aa13.31□□□□□ -0.28
MED28-203ENST00000503945 ALDH2P05091 517 aa13.31□□□□□ -0.28
MED28-203ENST00000503945 SRGAP2BP0DMP2 458 aa13.31□□□□□ -0.28
MED28-203ENST00000503945 TECP42680 631 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms