RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 NMT2O60551 498 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 SASH3O75995 380 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 LARGE1O95461 756 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 TSHRP16473 764 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 ALDH3A1P30838 453 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 EPHA5P54756 1037 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 JAG1P78504 1218 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 SCAPQ12770 1279 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 KIF5AQ12840 1032 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 MIIPQ5JXC2 388 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 PHLDB3Q6NSJ2 640 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 KLC3Q6P597 504 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 MTHFD1LQ6UB35 978 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 LMBR1LQ6UX01 489 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 MMGT1Q8N4V1 131 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 KLHDC9Q8NEP7 349 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 KHSRPQ92945 711 aaKnown RBP eCLIP3.03□□□□□ -1.926e-7■■■■■ 30.7
NEDD4-204ENST00000503468 CUL5Q93034 780 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 ITPKCQ96DU7 683 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 KLRG1Q96E93 195 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 NUP58Q9BVL2 599 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 TSGA10Q9BZW7 698 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 EBF2Q9HAK2 575 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.03□□□□□ -1.92
NEDD4-204ENST00000503468 GGA3Q9NZ52 723 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 STIM2Q9P246 746 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 SLC4A4Q9Y6R1 1079 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 CITO14578 2027 aa3.03□□□□□ -1.92
NEDD4-204ENST00000503468 ZNF638Q14966 1978 aaKnown RBP3.03□□□□□ -1.92
NEDD4-204ENST00000503468 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.03□□□□□ -1.93
NEDD4-204ENST00000503468 A0A0G2JLL6 359 aaPredicted RBP3.03□□□□□ -1.93
NEDD4-204ENST00000503468 A0A1W2PRG0 241 aa3.03□□□□□ -1.93
NEDD4-204ENST00000503468 C5orf60A6NFR6 353 aa3.03□□□□□ -1.93
NEDD4-204ENST00000503468 SPTLC2O15270 562 aa3.03□□□□□ -1.93
NEDD4-204ENST00000503468 MGRN1O60291 552 aa3.03□□□□□ -1.93
NEDD4-204ENST00000503468 CCDC166P0CW27 439 aa3.03□□□□□ -1.93
NEDD4-204ENST00000503468 IFNAR2P48551 515 aa3.03□□□□□ -1.93
NEDD4-204ENST00000503468 LAMB3Q13751 1172 aa3.03□□□□□ -1.93
NEDD4-204ENST00000503468 GPNMBQ14956 572 aa3.03□□□□□ -1.93
NEDD4-204ENST00000503468 IL17AQ16552 155 aa3.03□□□□□ -1.93
NEDD4-204ENST00000503468 TUSC1Q2TAM9 212 aa3.03□□□□□ -1.93
NEDD4-204ENST00000503468 MANEALQ5VSG8 457 aa3.03□□□□□ -1.93
NEDD4-204ENST00000503468 HIBCHQ6NVY1 386 aaPredicted RBP3.03□□□□□ -1.93
NEDD4-204ENST00000503468 CCDC129Q6ZRS4 1044 aa3.03□□□□□ -1.93
NEDD4-204ENST00000503468 ILDR2Q71H61 639 aa3.03□□□□□ -1.93
NEDD4-204ENST00000503468 PRRT2Q7Z6L0 340 aaPredicted RBP3.03□□□□□ -1.93
NEDD4-204ENST00000503468 LCA5Q86VQ0 697 aa3.03□□□□□ -1.93
NEDD4-204ENST00000503468 HOOK3Q86VS8 718 aa3.03□□□□□ -1.93
NEDD4-204ENST00000503468 NT5DC4Q86YG4 428 aa3.03□□□□□ -1.93
NEDD4-204ENST00000503468 ARHGAP24Q8N264 748 aa3.03□□□□□ -1.93
NEDD4-204ENST00000503468 CCDC197Q8NCU1 140 aa3.03□□□□□ -1.93
NEDD4-204ENST00000503468 DCAF4Q8WV16 495 aa3.03□□□□□ -1.93
NEDD4-204ENST00000503468 MAIP1Q8WWC4 291 aa3.03□□□□□ -1.93
NEDD4-204ENST00000503468 OPTNQ96CV9 577 aa3.03□□□□□ -1.93
NEDD4-204ENST00000503468 CEP63Q96MT8 703 aa3.03□□□□□ -1.93
NEDD4-204ENST00000503468 SMC6Q96SB8 1091 aa3.03□□□□□ -1.93
NEDD4-204ENST00000503468 GPR88Q9GZN0 384 aa3.03□□□□□ -1.93
NEDD4-204ENST00000503468 FZD8Q9H461 694 aa3.03□□□□□ -1.93
NEDD4-204ENST00000503468 ALG13Q9NP73 1137 aaKnown RBP3.03□□□□□ -1.93
NEDD4-204ENST00000503468 DMAP1Q9NPF5 467 aaPredicted RBP3.03□□□□□ -1.93
NEDD4-204ENST00000503468 GPR27Q9NS67 375 aa3.03□□□□□ -1.93
NEDD4-204ENST00000503468 THEGQ9P2T0 379 aa3.03□□□□□ -1.93
NEDD4-204ENST00000503468 BAIAP2L1Q9UHR4 511 aa3.03□□□□□ -1.93
NEDD4-204ENST00000503468 SCOCQ9UIL1 159 aa3.03□□□□□ -1.93
NEDD4-204ENST00000503468 TSC22D4Q9Y3Q8 395 aa3.03□□□□□ -1.93
NEDD4-204ENST00000503468 KLK4Q9Y5K2 254 aa3.03□□□□□ -1.93
NEDD4-204ENST00000503468 FAM155AB1AL88 458 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 IPO5O00410 1097 aaKnown RBP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 AKR1B10O60218 316 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 TLR2O60603 784 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 PHACTR2O75167 634 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 RB1P06400 928 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 FBLN1P23142 703 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 PAX7P23759 505 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 HSPA2P54652 639 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 GYS2P54840 703 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 ATP11AP98196 1134 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 MYO1EQ12965 1108 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 KLF1Q13351 362 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 GSTA3Q16772 222 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 NCAPH2Q6IBW4 605 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 LRIG3Q6UXM1 1119 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 UNC13DQ70J99 1090 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 FERMT3Q86UX7 667 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 IQCKQ8N0W5 287 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 ZNF687Q8N1G0 1237 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 WASF1Q92558 559 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 UPF1Q92900 1129 aaKnown RBP eCLIP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 CAVIN3Q969G5 261 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 CNKSR1Q969H4 720 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 GRAMD1AQ96CP6 724 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 VCPIP1Q96JH7 1222 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 UTP6Q9NYH9 597 aaKnown RBP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 TPX2Q9ULW0 747 aaKnown RBP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 GNEQ9Y223 722 aaKnown RBP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 SSX2IPQ9Y2D8 614 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 ATP8A1Q9Y2Q0 1164 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 PCDHGA4Q9Y5G9 962 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 CAPN6Q9Y6Q1 641 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 DOCK8Q8NF50 2099 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms