RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 MRPS27Q92552 414 aaKnown RBP18.23■□□□□ 0.51
SCLT1-205ENST00000503401 DDX12PQ92771 950 aa18.23■□□□□ 0.51
SCLT1-205ENST00000503401 ADAM2Q99965 735 aa18.23■□□□□ 0.51
SCLT1-205ENST00000503401 ZHX3Q9H4I2 956 aa18.23■□□□□ 0.51
SCLT1-205ENST00000503401 HPSEQ9Y251 543 aa18.23■□□□□ 0.51
SCLT1-205ENST00000503401 A0A1W2PQ27 194 aa18.22■□□□□ 0.51
SCLT1-205ENST00000503401 A0A1W2PQ64 194 aa18.22■□□□□ 0.51
SCLT1-205ENST00000503401 A0A1W2PQD8 194 aa18.22■□□□□ 0.51
SCLT1-205ENST00000503401 DENND3A2RUS2 1198 aa18.22■□□□□ 0.51
SCLT1-205ENST00000503401 UPP2O95045 317 aa18.22■□□□□ 0.51
SCLT1-205ENST00000503401 RABGGTBP53611 331 aa18.22■□□□□ 0.51
SCLT1-205ENST00000503401 POU5F1BQ06416 359 aa18.22■□□□□ 0.51
SCLT1-205ENST00000503401 ODR4Q5SWX8 454 aa18.22■□□□□ 0.51
SCLT1-205ENST00000503401 CDCA2Q69YH5 1023 aaPredicted RBP18.22■□□□□ 0.51
SCLT1-205ENST00000503401 IFNLR1Q8IU57 520 aaPredicted RBP18.22■□□□□ 0.51
SCLT1-205ENST00000503401 FTHL17Q9BXU8 183 aa18.22■□□□□ 0.51
SCLT1-205ENST00000503401 SERTAD1Q9UHV2 236 aa18.22■□□□□ 0.51
SCLT1-205ENST00000503401 PIN4Q9Y237 131 aaKnown RBP18.22■□□□□ 0.51
SCLT1-205ENST00000503401 USP20Q9Y2K6 914 aa18.22■□□□□ 0.51
SCLT1-205ENST00000503401 GOLGA6L4A6NEF3 574 aa18.21■□□□□ 0.51
SCLT1-205ENST00000503401 SOX1O00570 391 aaPredicted RBP18.21■□□□□ 0.51
SCLT1-205ENST00000503401 B4GALT5O43286 388 aa18.21■□□□□ 0.51
SCLT1-205ENST00000503401 EFCAB14O75071 495 aa18.21■□□□□ 0.51
SCLT1-205ENST00000503401 FAM13AO94988 1023 aa18.21■□□□□ 0.51
SCLT1-205ENST00000503401 PLS3P13797 630 aa18.21■□□□□ 0.51
SCLT1-205ENST00000503401 CASP1P29466 404 aa18.21■□□□□ 0.51
SCLT1-205ENST00000503401 SYKP43405 635 aa18.21■□□□□ 0.51
SCLT1-205ENST00000503401 DSC3Q14574 896 aa18.21■□□□□ 0.51
SCLT1-205ENST00000503401 HABP4Q5JVS0 413 aaKnown RBP18.21■□□□□ 0.51
SCLT1-205ENST00000503401 ZBTB8OSQ8IWT0 167 aa18.21■□□□□ 0.51
SCLT1-205ENST00000503401 GRAMD1CQ8IYS0 662 aa18.21■□□□□ 0.51
SCLT1-205ENST00000503401 CPB2Q96IY4 423 aa18.21■□□□□ 0.51
SCLT1-205ENST00000503401 NFKBIZQ9BYH8 718 aa18.21■□□□□ 0.51
SCLT1-205ENST00000503401 TSPYL2Q9H2G4 693 aaPredicted RBP18.21■□□□□ 0.51
SCLT1-205ENST00000503401 KMT5AQ9NQR1 393 aa18.21■□□□□ 0.51
SCLT1-205ENST00000503401 KBTBD4Q9NVX7 518 aa18.21■□□□□ 0.51
SCLT1-205ENST00000503401 ODF2LQ9ULJ1 636 aa18.21■□□□□ 0.51
SCLT1-205ENST00000503401 SLC16A4O15374 487 aa18.2■□□□□ 0.5
SCLT1-205ENST00000503401 TBCAO75347 108 aaKnown RBP18.2■□□□□ 0.5
SCLT1-205ENST00000503401 ERLIN2O94905 339 aa18.2■□□□□ 0.5
SCLT1-205ENST00000503401 AMHP03971 560 aa18.2■□□□□ 0.5
SCLT1-205ENST00000503401 AMHR2Q16671 573 aa18.2■□□□□ 0.5
SCLT1-205ENST00000503401 LONRF3Q496Y0 759 aa18.2■□□□□ 0.5
SCLT1-205ENST00000503401 MYCT1Q8N699 235 aa18.2■□□□□ 0.5
SCLT1-205ENST00000503401 DNAJC19Q96DA6 116 aa18.2■□□□□ 0.5
SCLT1-205ENST00000503401 SLC9A7Q96T83 725 aa18.2■□□□□ 0.5
SCLT1-205ENST00000503401 TNMDQ9H2S6 317 aa18.2■□□□□ 0.5
SCLT1-205ENST00000503401 CUEDC2Q9H467 287 aa18.2■□□□□ 0.5
SCLT1-205ENST00000503401 AGPAT5Q9NUQ2 364 aa18.2■□□□□ 0.5
SCLT1-205ENST00000503401 FAM237AA0A1B0GTK4 181 aa18.2■□□□□ 0.5
SCLT1-205ENST00000503401 TTLL13PA6NNM8 815 aa18.2■□□□□ 0.5
SCLT1-205ENST00000503401 ACTN4O43707 911 aaKnown RBP18.2■□□□□ 0.5
SCLT1-205ENST00000503401 TSPAN1O60635 241 aa18.2■□□□□ 0.5
SCLT1-205ENST00000503401 GADD45BO75293 160 aaPredicted RBP18.2■□□□□ 0.5
SCLT1-205ENST00000503401 EDN1P05305 212 aa18.2■□□□□ 0.5
SCLT1-205ENST00000503401 MYOGP15173 224 aa18.2■□□□□ 0.5
SCLT1-205ENST00000503401 ZSCAN20P17040 1043 aaPredicted RBP18.2■□□□□ 0.5
SCLT1-205ENST00000503401 HOXA11P31270 313 aaPredicted RBP18.2■□□□□ 0.5
SCLT1-205ENST00000503401 PBX2P40425 430 aa18.2■□□□□ 0.5
SCLT1-205ENST00000503401 AFMP43652 599 aa18.2■□□□□ 0.5
SCLT1-205ENST00000503401 ZNF131P52739 623 aa18.2■□□□□ 0.5
SCLT1-205ENST00000503401 LRIT3Q3SXY7 679 aa18.2■□□□□ 0.5
SCLT1-205ENST00000503401 HERC6Q8IVU3 1022 aa18.2■□□□□ 0.5
SCLT1-205ENST00000503401 CEP57L1Q8IYX8 460 aa18.2■□□□□ 0.5
SCLT1-205ENST00000503401 C2orf40Q9H1Z8 148 aa18.2■□□□□ 0.5
SCLT1-205ENST00000503401 C17orf75Q9HAS0 396 aa18.2■□□□□ 0.5
SCLT1-205ENST00000503401 PARVGQ9HBI0 331 aa18.2■□□□□ 0.5
SCLT1-205ENST00000503401 RGS18Q9NS28 235 aa18.2■□□□□ 0.5
SCLT1-205ENST00000503401 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.19■□□□□ 0.5
SCLT1-205ENST00000503401 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.19■□□□□ 0.5
SCLT1-205ENST00000503401 IDEP14735 1019 aa18.19■□□□□ 0.5
SCLT1-205ENST00000503401 TWF2Q6IBS0 349 aaKnown RBP18.19■□□□□ 0.5
SCLT1-205ENST00000503401 CDR2LQ86X02 465 aaPredicted RBP18.19■□□□□ 0.5
SCLT1-205ENST00000503401 CCDC113Q9H0I3 377 aa18.19■□□□□ 0.5
SCLT1-205ENST00000503401 BLZF1Q9H2G9 400 aa18.19■□□□□ 0.5
SCLT1-205ENST00000503401 FZD8Q9H461 694 aa18.19■□□□□ 0.5
SCLT1-205ENST00000503401 LARSQ9P2J5 1176 aaKnown RBP18.19■□□□□ 0.5
SCLT1-205ENST00000503401 ARHGAP28Q9P2N2 729 aa18.19■□□□□ 0.5
SCLT1-205ENST00000503401 PRKCBP05771 671 aa18.18■□□□□ 0.5
SCLT1-205ENST00000503401 SLFN14P0C7P3 912 aa18.18■□□□□ 0.5
SCLT1-205ENST00000503401 ARF4P18085 180 aaPredicted RBP18.18■□□□□ 0.5
SCLT1-205ENST00000503401 MAPK6Q16659 721 aa18.18■□□□□ 0.5
SCLT1-205ENST00000503401 CSPP1Q1MSJ5 1256 aa18.18■□□□□ 0.5
SCLT1-205ENST00000503401 TAS1R3Q7RTX0 852 aa18.18■□□□□ 0.5
SCLT1-205ENST00000503401 SFR1Q86XK3 245 aa18.18■□□□□ 0.5
SCLT1-205ENST00000503401 TMEM161BQ8NDZ6 487 aa18.18■□□□□ 0.5
SCLT1-205ENST00000503401 PHOSPHO2Q8TCD6 241 aa18.18■□□□□ 0.5
SCLT1-205ENST00000503401 TOP1MTQ969P6 601 aa18.18■□□□□ 0.5
SCLT1-205ENST00000503401 LRCH3Q96II8 777 aa18.18■□□□□ 0.5
SCLT1-205ENST00000503401 PYM1Q9BRP8 204 aaKnown RBP18.18■□□□□ 0.5
SCLT1-205ENST00000503401 PBX4Q9BYU1 374 aa18.18■□□□□ 0.5
SCLT1-205ENST00000503401 TRIM9Q9C026 710 aa18.18■□□□□ 0.5
SCLT1-205ENST00000503401 C9IYK1 514 aa18.17■□□□□ 0.5
SCLT1-205ENST00000503401 K7ERI5 159 aa18.17■□□□□ 0.5
SCLT1-205ENST00000503401 GJB5O95377 273 aa18.17■□□□□ 0.5
SCLT1-205ENST00000503401 SMTNP53814 917 aa18.17■□□□□ 0.5
SCLT1-205ENST00000503401 SLC24A5Q71RS6 500 aa18.17■□□□□ 0.5
SCLT1-205ENST00000503401 SPIRE2Q8WWL2 714 aa18.17■□□□□ 0.5
SCLT1-205ENST00000503401 PAGE5Q96GU1 130 aa18.17■□□□□ 0.5
SCLT1-205ENST00000503401 NTPCRQ9BSD7 190 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms