RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 NTPCRQ9BSD7 190 aaKnown RBP27.76■■■□□ 2.03
LSM6-202ENST00000502781 C1orf112Q9NSG2 853 aa27.76■■■□□ 2.03
LSM6-202ENST00000502781 AGPAT5Q9NUQ2 364 aa27.76■■■□□ 2.03
LSM6-202ENST00000502781 HPSEQ9Y251 543 aa27.76■■■□□ 2.03
LSM6-202ENST00000502781 ADGRA3Q8IWK6 1321 aa27.76■■■□□ 2.03
LSM6-202ENST00000502781 TTC3P53804 2025 aa27.76■■■□□ 2.03
LSM6-202ENST00000502781 INO80B-WBP1J3KQ70 363 aa27.75■■■□□ 2.03
LSM6-202ENST00000502781 HOXA11P31270 313 aaPredicted RBP27.75■■■□□ 2.03
LSM6-202ENST00000502781 NPTX2P47972 431 aa27.75■■■□□ 2.03
LSM6-202ENST00000502781 FAM189BP81408 668 aa27.75■■■□□ 2.03
LSM6-202ENST00000502781 SLC24A5Q71RS6 500 aa27.75■■■□□ 2.03
LSM6-202ENST00000502781 TMCO2Q7Z6W1 182 aaPredicted RBP27.75■■■□□ 2.03
LSM6-202ENST00000502781 SPIRE2Q8WWL2 714 aa27.75■■■□□ 2.03
LSM6-202ENST00000502781 TRAIPQ9BWF2 469 aa27.75■■■□□ 2.03
LSM6-202ENST00000502781 CCDC113Q9H0I3 377 aa27.75■■■□□ 2.03
LSM6-202ENST00000502781 C2orf40Q9H1Z8 148 aa27.75■■■□□ 2.03
LSM6-202ENST00000502781 FZD8Q9H461 694 aa27.75■■■□□ 2.03
LSM6-202ENST00000502781 KBTBD4Q9NVX7 518 aa27.75■■■□□ 2.03
LSM6-202ENST00000502781 KCNH3Q9ULD8 1083 aa27.75■■■□□ 2.03
LSM6-202ENST00000502781 PTPRSQ13332 1948 aa27.75■■■□□ 2.03
LSM6-202ENST00000502781 DENND3A2RUS2 1198 aa27.74■■■□□ 2.03
LSM6-202ENST00000502781 MYMKA6NI61 221 aa27.74■■■□□ 2.03
LSM6-202ENST00000502781 SFI1A8K8P3 1242 aa27.74■■■□□ 2.03
LSM6-202ENST00000502781 PLS3P13797 630 aa27.74■■■□□ 2.03
LSM6-202ENST00000502781 ZSCAN20P17040 1043 aaPredicted RBP27.74■■■□□ 2.03
LSM6-202ENST00000502781 PEX3P56589 373 aa27.74■■■□□ 2.03
LSM6-202ENST00000502781 CACNB1Q02641 598 aaPredicted RBP27.74■■■□□ 2.03
LSM6-202ENST00000502781 FAM187BQ17R55 369 aa27.74■■■□□ 2.03
LSM6-202ENST00000502781 PPP4R3CPQ6ZMV5 832 aa27.74■■■□□ 2.03
LSM6-202ENST00000502781 DHX58Q96C10 678 aa27.74■■■□□ 2.03
LSM6-202ENST00000502781 PBX4Q9BYU1 374 aa27.74■■■□□ 2.03
LSM6-202ENST00000502781 ARHGAP28Q9P2N2 729 aa27.74■■■□□ 2.03
LSM6-202ENST00000502781 POLR2DO15514 142 aaKnown RBP27.73■■■□□ 2.03
LSM6-202ENST00000502781 TSPAN1O60635 241 aa27.73■■■□□ 2.03
LSM6-202ENST00000502781 PFKFB1P16118 471 aa27.73■■■□□ 2.03
LSM6-202ENST00000502781 SARSP49591 514 aaKnown RBP27.73■■■□□ 2.03
LSM6-202ENST00000502781 FXR1P51114 621 aaKnown RBP eCLIP27.73■■■□□ 2.03
LSM6-202ENST00000502781 DMP1Q13316 513 aaPredicted RBP27.73■■■□□ 2.03
LSM6-202ENST00000502781 ZBTB8OSQ8IWT0 167 aa27.73■■■□□ 2.03
LSM6-202ENST00000502781 DEPTORQ8TB45 409 aa27.73■■■□□ 2.03
LSM6-202ENST00000502781 KCNN1Q92952 543 aa27.73■■■□□ 2.03
LSM6-202ENST00000502781 DNAJC19Q96DA6 116 aa27.73■■■□□ 2.03
LSM6-202ENST00000502781 PRIMPOLQ96LW4 560 aa27.73■■■□□ 2.03
LSM6-202ENST00000502781 PYM1Q9BRP8 204 aaKnown RBP27.73■■■□□ 2.03
LSM6-202ENST00000502781 KIFC3Q9BVG8 833 aa27.73■■■□□ 2.03
LSM6-202ENST00000502781 TNMDQ9H2S6 317 aa27.73■■■□□ 2.03
LSM6-202ENST00000502781 KCNG1Q9UIX4 513 aa27.73■■■□□ 2.03
LSM6-202ENST00000502781 PCDHA11Q9Y5I1 949 aa27.73■■■□□ 2.03
LSM6-202ENST00000502781 A0A1B0GVL5 298 aa27.73■■■□□ 2.03
LSM6-202ENST00000502781 AXLP30530 894 aa27.73■■■□□ 2.03
LSM6-202ENST00000502781 PBX2P40425 430 aa27.73■■■□□ 2.03
LSM6-202ENST00000502781 EFNA5P52803 228 aa27.73■■■□□ 2.03
LSM6-202ENST00000502781 RABGGTBP53611 331 aa27.73■■■□□ 2.03
LSM6-202ENST00000502781 HTRA4P83105 476 aaPredicted RBP27.73■■■□□ 2.03
LSM6-202ENST00000502781 DDX12PQ92771 950 aa27.73■■■□□ 2.03
LSM6-202ENST00000502781 LRCH3Q96II8 777 aa27.73■■■□□ 2.03
LSM6-202ENST00000502781 PRMT7Q9NVM4 692 aaPredicted RBP27.73■■■□□ 2.03
LSM6-202ENST00000502781 DACT1Q9NYF0 836 aa27.73■■■□□ 2.03
LSM6-202ENST00000502781 LARSQ9P2J5 1176 aaKnown RBP27.73■■■□□ 2.03
LSM6-202ENST00000502781 PIN4Q9Y237 131 aaKnown RBP27.73■■■□□ 2.03
LSM6-202ENST00000502781 LAMA2P24043 3122 aaKnown RBP27.72■■■□□ 2.03
LSM6-202ENST00000502781 ERLIN2O94905 339 aa27.72■■■□□ 2.03
LSM6-202ENST00000502781 RAB30Q15771 203 aa27.72■■■□□ 2.03
LSM6-202ENST00000502781 ELAC1Q9H777 363 aaKnown RBP27.72■■■□□ 2.03
LSM6-202ENST00000502781 MAGEF1Q9HAY2 307 aa27.72■■■□□ 2.03
LSM6-202ENST00000502781 A0A0U1RQF3 1178 aa27.71■■■□□ 2.03
LSM6-202ENST00000502781 CCDC169A6NNP5 214 aa27.71■■■□□ 2.03
LSM6-202ENST00000502781 KRT18P05783 430 aaKnown RBP27.71■■■□□ 2.03
LSM6-202ENST00000502781 NPAS4Q8IUM7 802 aa27.71■■■□□ 2.03
LSM6-202ENST00000502781 RAD9AQ99638 391 aa27.71■■■□□ 2.03
LSM6-202ENST00000502781 RC3H2Q9HBD1 1191 aaKnown RBP27.71■■■□□ 2.03
LSM6-202ENST00000502781 PARVGQ9HBI0 331 aa27.71■■■□□ 2.03
LSM6-202ENST00000502781 KMT5AQ9NQR1 393 aa27.71■■■□□ 2.03
LSM6-202ENST00000502781 YBX2Q9Y2T7 364 aaKnown RBP27.71■■■□□ 2.03
LSM6-202ENST00000502781 B4GALT5O43286 388 aa27.7■■■□□ 2.02
LSM6-202ENST00000502781 FAM13AO94988 1023 aa27.7■■■□□ 2.02
LSM6-202ENST00000502781 DNAJB2P25686 324 aa27.7■■■□□ 2.02
LSM6-202ENST00000502781 MAPK6Q16659 721 aa27.7■■■□□ 2.02
LSM6-202ENST00000502781 GPR153Q6NV75 609 aa27.7■■■□□ 2.02
LSM6-202ENST00000502781 CNNM4Q6P4Q7 775 aa27.7■■■□□ 2.02
LSM6-202ENST00000502781 DYMQ7RTS9 669 aa27.7■■■□□ 2.02
LSM6-202ENST00000502781 TAS1R3Q7RTX0 852 aa27.7■■■□□ 2.02
LSM6-202ENST00000502781 MRPS27Q92552 414 aaKnown RBP27.7■■■□□ 2.02
LSM6-202ENST00000502781 FIZ1Q96SL8 496 aa27.7■■■□□ 2.02
LSM6-202ENST00000502781 TMEM134Q9H6X4 195 aa27.7■■■□□ 2.02
LSM6-202ENST00000502781 ACKR2O00590 384 aa27.69■■■□□ 2.02
LSM6-202ENST00000502781 ACTN4O43707 911 aaKnown RBP27.69■■■□□ 2.02
LSM6-202ENST00000502781 TLL1O43897 1013 aa27.69■■■□□ 2.02
LSM6-202ENST00000502781 TBCAO75347 108 aaKnown RBP27.69■■■□□ 2.02
LSM6-202ENST00000502781 UPP2O95045 317 aa27.69■■■□□ 2.02
LSM6-202ENST00000502781 ARF4P18085 180 aaPredicted RBP27.69■■■□□ 2.02
LSM6-202ENST00000502781 SMTNP53814 917 aa27.69■■■□□ 2.02
LSM6-202ENST00000502781 NCKAP1LP55160 1127 aa27.69■■■□□ 2.02
LSM6-202ENST00000502781 UBXN11Q5T124 520 aa27.69■■■□□ 2.02
LSM6-202ENST00000502781 FAM117BQ6P1L5 589 aa27.69■■■□□ 2.02
LSM6-202ENST00000502781 ZNF598Q86UK7 904 aaKnown RBP27.69■■■□□ 2.02
LSM6-202ENST00000502781 TMEM161BQ8NDZ6 487 aa27.69■■■□□ 2.02
LSM6-202ENST00000502781 CCDC51Q96ER9 411 aa27.69■■■□□ 2.02
LSM6-202ENST00000502781 ZBED2Q9BTP6 218 aa27.69■■■□□ 2.02
LSM6-202ENST00000502781 LRRC27Q9C0I9 530 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms