RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 ZNF516Q92618 1163 aa12.55□□□□□ -0.4
UBE2D3-211ENST00000502404 CCDC136Q96JN2 1154 aa12.55□□□□□ -0.4
UBE2D3-211ENST00000502404 ZNF558Q96NG5 402 aa12.55□□□□□ -0.4
UBE2D3-211ENST00000502404 PPP1R16BQ96T49 567 aa12.55□□□□□ -0.4
UBE2D3-211ENST00000502404 USB1Q9BQ65 265 aaKnown RBP12.55□□□□□ -0.4
UBE2D3-211ENST00000502404 DACT1Q9NYF0 836 aa12.55□□□□□ -0.4
UBE2D3-211ENST00000502404 SPG21Q9NZD8 308 aa12.55□□□□□ -0.4
UBE2D3-211ENST00000502404 BARX2Q9UMQ3 279 aaPredicted RBP12.55□□□□□ -0.4
UBE2D3-211ENST00000502404 USP15Q9Y4E8 981 aaPredicted RBP12.55□□□□□ -0.4
UBE2D3-211ENST00000502404 PER2O15055 1255 aa12.54□□□□□ -0.4
UBE2D3-211ENST00000502404 REC8O95072 547 aa12.54□□□□□ -0.4
UBE2D3-211ENST00000502404 EOMESO95936 686 aa12.54□□□□□ -0.4
UBE2D3-211ENST00000502404 ADH1BP00325 375 aa12.54□□□□□ -0.4
UBE2D3-211ENST00000502404 FGFR1P11362 822 aa12.54□□□□□ -0.4
UBE2D3-211ENST00000502404 SKIP12755 728 aa12.54□□□□□ -0.4
UBE2D3-211ENST00000502404 CLCN3P51790 818 aa12.54□□□□□ -0.4
UBE2D3-211ENST00000502404 NLRP5P59047 1200 aa12.54□□□□□ -0.4
UBE2D3-211ENST00000502404 TBC1D8BQ0IIM8 1120 aa12.54□□□□□ -0.4
UBE2D3-211ENST00000502404 DSC3Q14574 896 aa12.54□□□□□ -0.4
UBE2D3-211ENST00000502404 CBX2Q14781 532 aaPredicted RBP12.54□□□□□ -0.4
UBE2D3-211ENST00000502404 TMEM184AQ6ZMB5 413 aa12.54□□□□□ -0.4
UBE2D3-211ENST00000502404 HFE2Q6ZVN8 426 aa12.54□□□□□ -0.4
UBE2D3-211ENST00000502404 ALYREFQ86V81 257 aaKnown RBP12.54□□□□□ -0.4
UBE2D3-211ENST00000502404 SUGP1Q8IWZ8 645 aaKnown RBP12.54□□□□□ -0.4
UBE2D3-211ENST00000502404 RASGRP4Q8TDF6 673 aa12.54□□□□□ -0.4
UBE2D3-211ENST00000502404 KCNB2Q92953 911 aa12.54□□□□□ -0.4
UBE2D3-211ENST00000502404 PBXIP1Q96AQ6 731 aa12.54□□□□□ -0.4
UBE2D3-211ENST00000502404 TCF25Q9BQ70 676 aa12.54□□□□□ -0.4
UBE2D3-211ENST00000502404 TEKT3Q9BXF9 490 aa12.54□□□□□ -0.4
UBE2D3-211ENST00000502404 SLC26A6Q9BXS9 759 aa12.54□□□□□ -0.4
UBE2D3-211ENST00000502404 MRPL9Q9BYD2 267 aaKnown RBP12.54□□□□□ -0.4
UBE2D3-211ENST00000502404 INO80BQ9C086 356 aaPredicted RBP12.54□□□□□ -0.4
UBE2D3-211ENST00000502404 ENTPD7Q9NQZ7 604 aa12.54□□□□□ -0.4
UBE2D3-211ENST00000502404 GTF3C3Q9Y5Q9 886 aa12.54□□□□□ -0.4
UBE2D3-211ENST00000502404 FSCN2O14926 492 aa12.53□□□□□ -0.4
UBE2D3-211ENST00000502404 GLP2RO95838 553 aa12.53□□□□□ -0.4
UBE2D3-211ENST00000502404 IFNAR1P17181 557 aa12.53□□□□□ -0.4
UBE2D3-211ENST00000502404 RPS6KB1P23443 525 aa12.53□□□□□ -0.4
UBE2D3-211ENST00000502404 HSPA4P34932 840 aa12.53□□□□□ -0.4
UBE2D3-211ENST00000502404 ALDH7A1P49419 539 aaKnown RBP12.53□□□□□ -0.4
UBE2D3-211ENST00000502404 ERVFC1P60507 584 aa12.53□□□□□ -0.4
UBE2D3-211ENST00000502404 MSS51Q4VC12 460 aa12.53□□□□□ -0.4
UBE2D3-211ENST00000502404 LRCH2Q5VUJ6 765 aa12.53□□□□□ -0.4
UBE2D3-211ENST00000502404 CPLX2Q6PUV4 134 aaKnown RBP12.53□□□□□ -0.4
UBE2D3-211ENST00000502404 KCNT2Q6UVM3 1135 aa12.53□□□□□ -0.4
UBE2D3-211ENST00000502404 TRIM67Q6ZTA4 783 aa12.53□□□□□ -0.4
UBE2D3-211ENST00000502404 TMC7Q7Z402 723 aa12.53□□□□□ -0.4
UBE2D3-211ENST00000502404 ECHDC2Q86YB7 292 aa12.53□□□□□ -0.4
UBE2D3-211ENST00000502404 FAM177A1Q8N128 213 aaPredicted RBP12.53□□□□□ -0.4
UBE2D3-211ENST00000502404 TMEM87AQ8NBN3 555 aa12.53□□□□□ -0.4
UBE2D3-211ENST00000502404 PHKBQ93100 1093 aa12.53□□□□□ -0.4
UBE2D3-211ENST00000502404 RPGRIP1Q96KN7 1286 aa12.53□□□□□ -0.4
UBE2D3-211ENST00000502404 FBXL18Q96ME1 805 aa12.53□□□□□ -0.4
UBE2D3-211ENST00000502404 CASD1Q96PB1 797 aa12.53□□□□□ -0.4
UBE2D3-211ENST00000502404 SPSB2Q99619 263 aa12.53□□□□□ -0.4
UBE2D3-211ENST00000502404 JPH2Q9BR39 696 aaPredicted RBP12.53□□□□□ -0.4
UBE2D3-211ENST00000502404 GCOM2Q9BZD3 368 aaPredicted RBP12.53□□□□□ -0.4
UBE2D3-211ENST00000502404 ADAMTS10Q9H324 1103 aa12.53□□□□□ -0.4
UBE2D3-211ENST00000502404 CWH43Q9H720 699 aa12.53□□□□□ -0.4
UBE2D3-211ENST00000502404 CHST12Q9NRB3 414 aa12.53□□□□□ -0.4
UBE2D3-211ENST00000502404 NID2Q14112 1375 aa12.53□□□□□ -0.4
UBE2D3-211ENST00000502404 A0A0U1RQF3 1178 aa12.52□□□□□ -0.41
UBE2D3-211ENST00000502404 TMEM221A6NGB7 291 aa12.52□□□□□ -0.41
UBE2D3-211ENST00000502404 CFAP99D6REC4 459 aa12.52□□□□□ -0.41
UBE2D3-211ENST00000502404 M0R296 226 aa12.52□□□□□ -0.41
UBE2D3-211ENST00000502404 CPLX1O14810 134 aa12.52□□□□□ -0.41
UBE2D3-211ENST00000502404 MSH4O15457 936 aa12.52□□□□□ -0.41
UBE2D3-211ENST00000502404 DARSP14868 501 aaKnown RBP12.52□□□□□ -0.41
UBE2D3-211ENST00000502404 CPA1P15085 419 aa12.52□□□□□ -0.41
UBE2D3-211ENST00000502404 TECP42680 631 aa12.52□□□□□ -0.41
UBE2D3-211ENST00000502404 GPC3P51654 580 aa12.52□□□□□ -0.41
UBE2D3-211ENST00000502404 ZXDAP98168 799 aa12.52□□□□□ -0.41
UBE2D3-211ENST00000502404 PRKCEQ02156 737 aa12.52□□□□□ -0.41
UBE2D3-211ENST00000502404 NHLH1Q02575 133 aa12.52□□□□□ -0.41
UBE2D3-211ENST00000502404 SSRP1Q08945 709 aaKnown RBP12.52□□□□□ -0.41
UBE2D3-211ENST00000502404 SMC1AQ14683 1233 aaKnown RBP12.52□□□□□ -0.41
UBE2D3-211ENST00000502404 XKR3Q5GH77 459 aa12.52□□□□□ -0.41
UBE2D3-211ENST00000502404 PLPP4Q5VZY2 271 aa12.52□□□□□ -0.41
UBE2D3-211ENST00000502404 GALNT17Q6IS24 598 aa12.52□□□□□ -0.41
UBE2D3-211ENST00000502404 CES5AQ6NT32 575 aa12.52□□□□□ -0.41
UBE2D3-211ENST00000502404 EXOC8Q8IYI6 725 aa12.52□□□□□ -0.41
UBE2D3-211ENST00000502404 LRRC71Q8N4P6 559 aa12.52□□□□□ -0.41
UBE2D3-211ENST00000502404 RNF169Q8NCN4 708 aa12.52□□□□□ -0.41
UBE2D3-211ENST00000502404 CASP10Q92851 521 aa12.52□□□□□ -0.41
UBE2D3-211ENST00000502404 SLC5A5Q92911 643 aa12.52□□□□□ -0.41
UBE2D3-211ENST00000502404 AGXT2Q9BYV1 514 aa12.52□□□□□ -0.41
UBE2D3-211ENST00000502404 IRF2BPLQ9H1B7 796 aa12.52□□□□□ -0.41
UBE2D3-211ENST00000502404 NR2E1Q9Y466 385 aa12.52□□□□□ -0.41
UBE2D3-211ENST00000502404 SNX14Q9Y5W7 946 aa12.52□□□□□ -0.41
UBE2D3-211ENST00000502404 MYH9P35579 1960 aaKnown RBP12.52□□□□□ -0.41
UBE2D3-211ENST00000502404 EVPLQ92817 2033 aa12.52□□□□□ -0.41
UBE2D3-211ENST00000502404 LOXHD1Q8IVV2 1947 aa12.51□□□□□ -0.41
UBE2D3-211ENST00000502404 CHMP2AO43633 222 aa12.51□□□□□ -0.41
UBE2D3-211ENST00000502404 DKC1O60832 514 aaKnown RBP eCLIP12.51□□□□□ -0.41
UBE2D3-211ENST00000502404 MRE11P49959 708 aa12.51□□□□□ -0.41
UBE2D3-211ENST00000502404 KCNC4Q03721 635 aa12.51□□□□□ -0.41
UBE2D3-211ENST00000502404 NTRK3Q16288 839 aa12.51□□□□□ -0.41
UBE2D3-211ENST00000502404 Q4G0T1 1027 aa12.51□□□□□ -0.41
UBE2D3-211ENST00000502404 TMEM259Q4ZIN3 620 aa12.51□□□□□ -0.41
UBE2D3-211ENST00000502404 DESI1Q6ICB0 168 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms