RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	ZBTB10	Q96DT7	871 aa		13.39	□□□□□ -0.27
MATR3-231	ENST00000502394	DDX27	Q96GQ7	796 aa	Known RBP	13.39	□□□□□ -0.27
MATR3-231	ENST00000502394	UNC93B1	Q9H1C4	597 aa		13.39	□□□□□ -0.27
MATR3-231	ENST00000502394	TRAF3IP3	Q9Y228	551 aa		13.39	□□□□□ -0.27
MATR3-231	ENST00000502394	NFE2L3	Q9Y4A8	694 aa		13.39	□□□□□ -0.27
MATR3-231	ENST00000502394	BICDL2	A1A5D9	508 aa		13.38	□□□□□ -0.27
MATR3-231	ENST00000502394	BECN2	A8MW95	431 aa		13.38	□□□□□ -0.27
MATR3-231	ENST00000502394		K7ENM7	598 aa		13.38	□□□□□ -0.27
MATR3-231	ENST00000502394	SLC16A4	O15374	487 aa		13.38	□□□□□ -0.27
MATR3-231	ENST00000502394	TGFB1I1	O43294	461 aa		13.38	□□□□□ -0.27
MATR3-231	ENST00000502394	AP5Z1	O43299	807 aa		13.38	□□□□□ -0.27
MATR3-231	ENST00000502394	ASGR1	P07306	291 aa		13.38	□□□□□ -0.27
MATR3-231	ENST00000502394	SCP2	P22307	547 aa		13.38	□□□□□ -0.27
MATR3-231	ENST00000502394	CTCF	P49711	727 aa	Predicted RBP	13.38	□□□□□ -0.27
MATR3-231	ENST00000502394	CLCN3	P51790	818 aa		13.38	□□□□□ -0.27
MATR3-231	ENST00000502394	IGBP1	P78318	339 aa		13.38	□□□□□ -0.27
MATR3-231	ENST00000502394	PPP2R5A	Q15172	486 aa		13.38	□□□□□ -0.27
MATR3-231	ENST00000502394	KCNA10	Q16322	511 aa		13.38	□□□□□ -0.27
MATR3-231	ENST00000502394	NFIL3	Q16649	462 aa		13.38	□□□□□ -0.27
MATR3-231	ENST00000502394	KNOP1	Q1ED39	458 aa	Known RBP	13.38	□□□□□ -0.27
MATR3-231	ENST00000502394	CDCA2	Q69YH5	1023 aa	Predicted RBP	13.38	□□□□□ -0.27
MATR3-231	ENST00000502394	EFCAB12	Q6NXP0	572 aa		13.38	□□□□□ -0.27
MATR3-231	ENST00000502394	CXCL17	Q6UXB2	119 aa		13.38	□□□□□ -0.27
MATR3-231	ENST00000502394	LRRC55	Q6ZSA7	311 aa		13.38	□□□□□ -0.27
MATR3-231	ENST00000502394	RNF180	Q86T96	592 aa		13.38	□□□□□ -0.27
MATR3-231	ENST00000502394	SESTD1	Q86VW0	696 aa		13.38	□□□□□ -0.27
MATR3-231	ENST00000502394	MAP4K3	Q8IVH8	894 aa		13.38	□□□□□ -0.27
MATR3-231	ENST00000502394	PCSK9	Q8NBP7	692 aa	Known RBP	13.38	□□□□□ -0.27
MATR3-231	ENST00000502394	PRPF31	Q8WWY3	499 aa	Known RBP	13.38	□□□□□ -0.27
MATR3-231	ENST00000502394	PSPC1	Q8WXF1	523 aa	Known RBP	13.38	□□□□□ -0.27
MATR3-231	ENST00000502394	IFT74	Q96LB3	600 aa		13.38	□□□□□ -0.27
MATR3-231	ENST00000502394	TSEN34	Q9BSV6	310 aa	Known RBP	13.38	□□□□□ -0.27
MATR3-231	ENST00000502394	KMT5A	Q9NQR1	393 aa		13.38	□□□□□ -0.27
MATR3-231	ENST00000502394	SETD4	Q9NVD3	440 aa		13.38	□□□□□ -0.27
MATR3-231	ENST00000502394	FANCL	Q9NW38	375 aa		13.38	□□□□□ -0.27
MATR3-231	ENST00000502394	KCNG1	Q9UIX4	513 aa		13.38	□□□□□ -0.27
MATR3-231	ENST00000502394	SI	P14410	1827 aa		13.38	□□□□□ -0.27
MATR3-231	ENST00000502394	GRIN2D	O15399	1336 aa		13.38	□□□□□ -0.27
MATR3-231	ENST00000502394	MOXD2P	A6NHM9	499 aa		13.37	□□□□□ -0.27
MATR3-231	ENST00000502394	PDXK	O00764	312 aa		13.37	□□□□□ -0.27
MATR3-231	ENST00000502394	ASAP2	O43150	1006 aa		13.37	□□□□□ -0.27
MATR3-231	ENST00000502394	LBX1	P52954	281 aa		13.37	□□□□□ -0.27
MATR3-231	ENST00000502394	SMTN	P53814	917 aa		13.37	□□□□□ -0.27
MATR3-231	ENST00000502394	POU5F1B	Q06416	359 aa		13.37	□□□□□ -0.27
MATR3-231	ENST00000502394	LAMTOR4	Q0VGL1	99 aa		13.37	□□□□□ -0.27
MATR3-231	ENST00000502394	MXD4	Q14582	209 aa	Predicted RBP	13.37	□□□□□ -0.27
MATR3-231	ENST00000502394	MTFR1	Q15390	333 aa		13.37	□□□□□ -0.27
MATR3-231	ENST00000502394	EDRF1	Q3B7T1	1238 aa		13.37	□□□□□ -0.27
MATR3-231	ENST00000502394	NBPF20	Q3BBV1	942 aa		13.37	□□□□□ -0.27
MATR3-231	ENST00000502394	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.37	□□□□□ -0.27
MATR3-231	ENST00000502394	SARM1	Q6SZW1	724 aa		13.37	□□□□□ -0.27
MATR3-231	ENST00000502394	STXBP4	Q6ZWJ1	553 aa		13.37	□□□□□ -0.27
MATR3-231	ENST00000502394	IRF2BP1	Q8IU81	584 aa		13.37	□□□□□ -0.27
MATR3-231	ENST00000502394	KSR1	Q8IVT5	923 aa		13.37	□□□□□ -0.27
MATR3-231	ENST00000502394	NELFCD	Q8IXH7	590 aa		13.37	□□□□□ -0.27
MATR3-231	ENST00000502394	KIAA0319L	Q8IZA0	1049 aa		13.37	□□□□□ -0.27
MATR3-231	ENST00000502394	RETREG2	Q8NC44	543 aa		13.37	□□□□□ -0.27
MATR3-231	ENST00000502394	TMEM174	Q8WUU8	243 aa		13.37	□□□□□ -0.27
MATR3-231	ENST00000502394	KIFC3	Q9BVG8	833 aa		13.37	□□□□□ -0.27
MATR3-231	ENST00000502394	SAMSN1	Q9NSI8	373 aa	Known RBP	13.37	□□□□□ -0.27
MATR3-231	ENST00000502394	TYW1	Q9NV66	732 aa	Known RBP	13.37	□□□□□ -0.27
MATR3-231	ENST00000502394	SUCLA2	Q9P2R7	463 aa	Predicted RBP	13.37	□□□□□ -0.27
MATR3-231	ENST00000502394	HDAC6	Q9UBN7	1215 aa		13.37	□□□□□ -0.27
MATR3-231	ENST00000502394	GTF2IRD1	Q9UHL9	959 aa		13.37	□□□□□ -0.27
MATR3-231	ENST00000502394	SMIM35	A0A1B0GVV1	85 aa		13.36	□□□□□ -0.27
MATR3-231	ENST00000502394		H0YCG3	227 aa		13.36	□□□□□ -0.27
MATR3-231	ENST00000502394	GOLGA6L19	H0YKK7	550 aa		13.36	□□□□□ -0.27
MATR3-231	ENST00000502394	CABYR	O75952	493 aa		13.36	□□□□□ -0.27
MATR3-231	ENST00000502394	PIGR	P01833	764 aa		13.36	□□□□□ -0.27
MATR3-231	ENST00000502394	ABCD1	P33897	745 aa		13.36	□□□□□ -0.27
MATR3-231	ENST00000502394	SLC9C1	Q4G0N8	1177 aa		13.36	□□□□□ -0.27
MATR3-231	ENST00000502394	NFRKB	Q6P4R8	1299 aa		13.36	□□□□□ -0.27
MATR3-231	ENST00000502394	APTX	Q7Z2E3	356 aa	Known RBP	13.36	□□□□□ -0.27
MATR3-231	ENST00000502394	NOC3L	Q8WTT2	800 aa	Known RBP	13.36	□□□□□ -0.27
MATR3-231	ENST00000502394	PPP1R13L	Q8WUF5	828 aa		13.36	□□□□□ -0.27
MATR3-231	ENST00000502394	ARMC5	Q96C12	935 aa		13.36	□□□□□ -0.27
MATR3-231	ENST00000502394	ZNF333	Q96JL9	665 aa		13.36	□□□□□ -0.27
MATR3-231	ENST00000502394	ACCS	Q96QU6	501 aa		13.36	□□□□□ -0.27
MATR3-231	ENST00000502394	NFKBIZ	Q9BYH8	718 aa		13.36	□□□□□ -0.27
MATR3-231	ENST00000502394	CCDC113	Q9H0I3	377 aa		13.36	□□□□□ -0.27
MATR3-231	ENST00000502394	IKZF4	Q9H2S9	585 aa		13.36	□□□□□ -0.27
MATR3-231	ENST00000502394	THAP9	Q9H5L6	903 aa		13.36	□□□□□ -0.27
MATR3-231	ENST00000502394	TMEM134	Q9H6X4	195 aa		13.36	□□□□□ -0.27
MATR3-231	ENST00000502394	SUGCT	Q9HAC7	445 aa		13.36	□□□□□ -0.27
MATR3-231	ENST00000502394	TBX20	Q9UMR3	447 aa		13.36	□□□□□ -0.27
MATR3-231	ENST00000502394	EVPL	Q92817	2033 aa		13.35	□□□□□ -0.27
MATR3-231	ENST00000502394	C17orf102	A2RUQ5	167 aa		13.35	□□□□□ -0.27
MATR3-231	ENST00000502394	DENND3	A2RUS2	1198 aa		13.35	□□□□□ -0.27
MATR3-231	ENST00000502394	CCDC169	A6NNP5	214 aa		13.35	□□□□□ -0.27
MATR3-231	ENST00000502394	TREH	O43280	583 aa		13.35	□□□□□ -0.27
MATR3-231	ENST00000502394	GJB1	P08034	283 aa		13.35	□□□□□ -0.27
MATR3-231	ENST00000502394	CCL5	P13501	91 aa		13.35	□□□□□ -0.27
MATR3-231	ENST00000502394	ATP1A3	P13637	1013 aa		13.35	□□□□□ -0.27
MATR3-231	ENST00000502394	DNM2	P50570	870 aa		13.35	□□□□□ -0.27
MATR3-231	ENST00000502394	ACLY	P53396	1101 aa		13.35	□□□□□ -0.27
MATR3-231	ENST00000502394	PTEN	P60484	403 aa		13.35	□□□□□ -0.27
MATR3-231	ENST00000502394	SNRPF	P62306	86 aa	Known RBP	13.35	□□□□□ -0.27
MATR3-231	ENST00000502394	ZNF200	P98182	395 aa	Predicted RBP	13.35	□□□□□ -0.27
MATR3-231	ENST00000502394	PKN2	Q16513	984 aa	Known RBP	13.35	□□□□□ -0.27
MATR3-231	ENST00000502394	RUFY4	Q6ZNE9	571 aa		13.35	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms