RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 GBP3Q9H0R5 595 aa16.5■□□□□ 0.23
SEC61A1-207ENST00000498837 CYP26B1Q9NR63 512 aa16.5■□□□□ 0.23
SEC61A1-207ENST00000498837 SEPT9Q9UHD8 586 aaPredicted RBP16.5■□□□□ 0.23
SEC61A1-207ENST00000498837 ARID2Q68CP9 1835 aa16.49■□□□□ 0.23
SEC61A1-207ENST00000498837 IGKV6-21A0A0C4DH24 114 aa16.49■□□□□ 0.23
SEC61A1-207ENST00000498837 PI15O43692 258 aa16.49■□□□□ 0.23
SEC61A1-207ENST00000498837 OFD1O75665 1012 aa16.49■□□□□ 0.23
SEC61A1-207ENST00000498837 PSMD10O75832 226 aa16.49■□□□□ 0.23
SEC61A1-207ENST00000498837 SLC11A1P49279 550 aa16.49■□□□□ 0.23
SEC61A1-207ENST00000498837 CLCN5P51795 746 aa16.49■□□□□ 0.23
SEC61A1-207ENST00000498837 RNASELQ05823 741 aaKnown RBP16.49■□□□□ 0.23
SEC61A1-207ENST00000498837 GIT2Q14161 759 aa16.49■□□□□ 0.23
SEC61A1-207ENST00000498837 KRT32Q14532 448 aa16.49■□□□□ 0.23
SEC61A1-207ENST00000498837 CWF19L1Q69YN2 538 aaKnown RBP16.49■□□□□ 0.23
SEC61A1-207ENST00000498837 MIER3Q7Z3K6 550 aa16.49■□□□□ 0.23
SEC61A1-207ENST00000498837 CABP7Q86V35 215 aa16.49■□□□□ 0.23
SEC61A1-207ENST00000498837 ZNF280BQ86YH2 543 aa16.49■□□□□ 0.23
SEC61A1-207ENST00000498837 KSR1Q8IVT5 923 aa16.49■□□□□ 0.23
SEC61A1-207ENST00000498837 FLCNQ8NFG4 579 aa16.49■□□□□ 0.23
SEC61A1-207ENST00000498837 BICD2Q8TD16 824 aa16.49■□□□□ 0.23
SEC61A1-207ENST00000498837 FAM105AQ9NUU6 356 aa16.49■□□□□ 0.23
SEC61A1-207ENST00000498837 VPS54Q9P1Q0 977 aa16.49■□□□□ 0.23
SEC61A1-207ENST00000498837 PIN4Q9Y237 131 aaKnown RBP16.49■□□□□ 0.23
SEC61A1-207ENST00000498837 HMGB1P09429 215 aaKnown RBP16.48■□□□□ 0.23
SEC61A1-207ENST00000498837 SFPQP23246 707 aaKnown RBP eCLIP16.48■□□□□ 0.23
SEC61A1-207ENST00000498837 USP11P51784 963 aa16.48■□□□□ 0.23
SEC61A1-207ENST00000498837 CDC42EP1Q00587 391 aa16.48■□□□□ 0.23
SEC61A1-207ENST00000498837 PTPN14Q15678 1187 aa16.48■□□□□ 0.23
SEC61A1-207ENST00000498837 NTRK3Q16288 839 aa16.48■□□□□ 0.23
SEC61A1-207ENST00000498837 XKR3Q5GH77 459 aa16.48■□□□□ 0.23
SEC61A1-207ENST00000498837 BMP2KLQ5H9B9 411 aa16.48■□□□□ 0.23
SEC61A1-207ENST00000498837 GLB1LQ6UWU2 654 aa16.48■□□□□ 0.23
SEC61A1-207ENST00000498837 GPR149Q86SP6 731 aa16.48■□□□□ 0.23
SEC61A1-207ENST00000498837 RHPN2Q8IUC4 686 aa16.48■□□□□ 0.23
SEC61A1-207ENST00000498837 SUCLA2Q9P2R7 463 aaPredicted RBP16.48■□□□□ 0.23
SEC61A1-207ENST00000498837 NID2Q14112 1375 aa16.48■□□□□ 0.23
SEC61A1-207ENST00000498837 FANCMQ8IYD8 2048 aa16.48■□□□□ 0.23
SEC61A1-207ENST00000498837 ZNF623O75123 536 aa16.47■□□□□ 0.23
SEC61A1-207ENST00000498837 SSBP05455 408 aaKnown RBP eCLIP16.47■□□□□ 0.23
SEC61A1-207ENST00000498837 SKIP12755 728 aa16.47■□□□□ 0.23
SEC61A1-207ENST00000498837 NPR3P17342 541 aa16.47■□□□□ 0.23
SEC61A1-207ENST00000498837 DNM2P50570 870 aa16.47■□□□□ 0.23
SEC61A1-207ENST00000498837 AKAP17AQ02040 695 aaKnown RBP16.47■□□□□ 0.23
SEC61A1-207ENST00000498837 CATSPER4Q7RTX7 472 aa16.47■□□□□ 0.23
SEC61A1-207ENST00000498837 PPFIBP1Q86W92 1011 aa16.47■□□□□ 0.23
SEC61A1-207ENST00000498837 CCDC148Q8NFR7 591 aa16.47■□□□□ 0.23
SEC61A1-207ENST00000498837 TBCKQ8TEA7 893 aa16.47■□□□□ 0.23
SEC61A1-207ENST00000498837 ACSF2Q96CM8 615 aaPredicted RBP16.47■□□□□ 0.23
SEC61A1-207ENST00000498837 KLHL5Q96PQ7 755 aa16.47■□□□□ 0.23
SEC61A1-207ENST00000498837 SLC26A6Q9BXS9 759 aa16.47■□□□□ 0.23
SEC61A1-207ENST00000498837 INO80BQ9C086 356 aaPredicted RBP16.47■□□□□ 0.23
SEC61A1-207ENST00000498837 SFXN1Q9H9B4 322 aa16.47■□□□□ 0.23
SEC61A1-207ENST00000498837 CACNA1IQ9P0X4 2223 aa16.47■□□□□ 0.23
SEC61A1-207ENST00000498837 SPDYE4A6NLX3 237 aa16.46■□□□□ 0.23
SEC61A1-207ENST00000498837 DDX11L8A8MPP1 907 aa16.46■□□□□ 0.23
SEC61A1-207ENST00000498837 MAFO75444 373 aaPredicted RBP16.46■□□□□ 0.23
SEC61A1-207ENST00000498837 DDHD2O94830 711 aa16.46■□□□□ 0.23
SEC61A1-207ENST00000498837 CNPP09543 421 aaKnown RBP16.46■□□□□ 0.23
SEC61A1-207ENST00000498837 KLRC2P26717 231 aa16.46■□□□□ 0.23
SEC61A1-207ENST00000498837 CLCN4P51793 760 aa16.46■□□□□ 0.23
SEC61A1-207ENST00000498837 AFF1P51825 1210 aaKnown RBP16.46■□□□□ 0.23
SEC61A1-207ENST00000498837 TDGQ13569 410 aa16.46■□□□□ 0.23
SEC61A1-207ENST00000498837 B3GNT9Q6UX72 402 aa16.46■□□□□ 0.23
SEC61A1-207ENST00000498837 AGMOQ6ZNB7 445 aa16.46■□□□□ 0.23
SEC61A1-207ENST00000498837 CCDC149Q6ZUS6 474 aa16.46■□□□□ 0.23
SEC61A1-207ENST00000498837 ZNF410Q86VK4 478 aa16.46■□□□□ 0.23
SEC61A1-207ENST00000498837 RDM1Q8NG50 284 aa16.46■□□□□ 0.23
SEC61A1-207ENST00000498837 RSPH1Q8WYR4 309 aa16.46■□□□□ 0.23
SEC61A1-207ENST00000498837 NKD2Q969F2 451 aaPredicted RBP16.46■□□□□ 0.23
SEC61A1-207ENST00000498837 NLRP4Q96MN2 994 aa16.46■□□□□ 0.23
SEC61A1-207ENST00000498837 JAKMIP1Q96N16 626 aaKnown RBP16.46■□□□□ 0.23
SEC61A1-207ENST00000498837 RNF26Q9BY78 433 aaPredicted RBP16.46■□□□□ 0.23
SEC61A1-207ENST00000498837 KCNK12Q9HB15 430 aa16.46■□□□□ 0.23
SEC61A1-207ENST00000498837 DMXL1Q9Y485 3027 aa16.45■□□□□ 0.22
SEC61A1-207ENST00000498837 CARNS1A5YM72 827 aa16.45■□□□□ 0.22
SEC61A1-207ENST00000498837 LILRB3O75022 631 aa16.45■□□□□ 0.22
SEC61A1-207ENST00000498837 TDP2O95551 362 aa16.45■□□□□ 0.22
SEC61A1-207ENST00000498837 AOC1P19801 751 aa16.45■□□□□ 0.22
SEC61A1-207ENST00000498837 RAB27AP51159 221 aa16.45■□□□□ 0.22
SEC61A1-207ENST00000498837 FOXK2Q01167 660 aa16.45■□□□□ 0.22
SEC61A1-207ENST00000498837 Q4G0T1 1027 aa16.45■□□□□ 0.22
SEC61A1-207ENST00000498837 PLA2G4FQ68DD2 849 aa16.45■□□□□ 0.22
SEC61A1-207ENST00000498837 ANO5Q75V66 913 aa16.45■□□□□ 0.22
SEC61A1-207ENST00000498837 OTOP3Q7RTS5 596 aa16.45■□□□□ 0.22
SEC61A1-207ENST00000498837 IFT122Q9HBG6 1241 aa16.45■□□□□ 0.22
SEC61A1-207ENST00000498837 NCOA5Q9HCD5 579 aaKnown RBP16.45■□□□□ 0.22
SEC61A1-207ENST00000498837 DUSP12Q9UNI6 340 aa16.45■□□□□ 0.22
SEC61A1-207ENST00000498837 PCDHB2Q9Y5E7 798 aa16.45■□□□□ 0.22
SEC61A1-207ENST00000498837 NARSO43776 548 aaKnown RBP16.44■□□□□ 0.22
SEC61A1-207ENST00000498837 N4BP1O75113 896 aaKnown RBP16.44■□□□□ 0.22
SEC61A1-207ENST00000498837 IFNAR1P17181 557 aa16.44■□□□□ 0.22
SEC61A1-207ENST00000498837 NLRP5P59047 1200 aa16.44■□□□□ 0.22
SEC61A1-207ENST00000498837 CCT2P78371 535 aaKnown RBP16.44■□□□□ 0.22
SEC61A1-207ENST00000498837 LETM2Q2VYF4 491 aa16.44■□□□□ 0.22
SEC61A1-207ENST00000498837 BLOC1S2Q6QNY1 142 aa16.44■□□□□ 0.22
SEC61A1-207ENST00000498837 ADSSL1Q8N142 457 aa16.44■□□□□ 0.22
SEC61A1-207ENST00000498837 KCNB2Q92953 911 aa16.44■□□□□ 0.22
SEC61A1-207ENST00000498837 PGBD4Q96DM1 585 aa16.44■□□□□ 0.22
SEC61A1-207ENST00000498837 EMILIN2Q9BXX0 1053 aa16.44■□□□□ 0.22
SEC61A1-207ENST00000498837 FAN1Q9Y2M0 1017 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms