RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 KCNG1Q9UIX4 513 aa17.2■□□□□ 0.34
CPNE1-228ENST00000498814 HPSEQ9Y251 543 aa17.2■□□□□ 0.34
CPNE1-228ENST00000498814 DENND3A2RUS2 1198 aa17.19■□□□□ 0.34
CPNE1-228ENST00000498814 SFI1A8K8P3 1242 aa17.19■□□□□ 0.34
CPNE1-228ENST00000498814 INO80B-WBP1J3KQ70 363 aa17.19■□□□□ 0.34
CPNE1-228ENST00000498814 MGEA5O60502 916 aa17.19■□□□□ 0.34
CPNE1-228ENST00000498814 KRT18P05783 430 aaKnown RBP17.19■□□□□ 0.34
CPNE1-228ENST00000498814 PLS3P13797 630 aa17.19■□□□□ 0.34
CPNE1-228ENST00000498814 PFKFB1P16118 471 aa17.19■□□□□ 0.34
CPNE1-228ENST00000498814 ZSCAN20P17040 1043 aaPredicted RBP17.19■□□□□ 0.34
CPNE1-228ENST00000498814 NPTX2P47972 431 aa17.19■□□□□ 0.34
CPNE1-228ENST00000498814 ZNF131P52739 623 aa17.19■□□□□ 0.34
CPNE1-228ENST00000498814 EFNA5P52803 228 aa17.19■□□□□ 0.34
CPNE1-228ENST00000498814 PEX3P56589 373 aa17.19■□□□□ 0.34
CPNE1-228ENST00000498814 DMP1Q13316 513 aaPredicted RBP17.19■□□□□ 0.34
CPNE1-228ENST00000498814 HERC6Q8IVU3 1022 aa17.19■□□□□ 0.34
CPNE1-228ENST00000498814 ZBTB8OSQ8IWT0 167 aa17.19■□□□□ 0.34
CPNE1-228ENST00000498814 SPIRE2Q8WWL2 714 aa17.19■□□□□ 0.34
CPNE1-228ENST00000498814 TOP1MTQ969P6 601 aa17.19■□□□□ 0.34
CPNE1-228ENST00000498814 NTPCRQ9BSD7 190 aaKnown RBP17.19■□□□□ 0.34
CPNE1-228ENST00000498814 TNMDQ9H2S6 317 aa17.19■□□□□ 0.34
CPNE1-228ENST00000498814 MAGEF1Q9HAY2 307 aa17.19■□□□□ 0.34
CPNE1-228ENST00000498814 C1orf112Q9NSG2 853 aa17.19■□□□□ 0.34
CPNE1-228ENST00000498814 AGPAT5Q9NUQ2 364 aa17.19■□□□□ 0.34
CPNE1-228ENST00000498814 KBTBD4Q9NVX7 518 aa17.19■□□□□ 0.34
CPNE1-228ENST00000498814 A0A1B0GVL5 298 aa17.18■□□□□ 0.34
CPNE1-228ENST00000498814 MYMKA6NI61 221 aa17.18■□□□□ 0.34
CPNE1-228ENST00000498814 GRXCR1A8MXD5 290 aa17.18■□□□□ 0.34
CPNE1-228ENST00000498814 C9IYK1 514 aa17.18■□□□□ 0.34
CPNE1-228ENST00000498814 ERLIN2O94905 339 aa17.18■□□□□ 0.34
CPNE1-228ENST00000498814 CACNB1Q02641 598 aaPredicted RBP17.18■□□□□ 0.34
CPNE1-228ENST00000498814 AMHR2Q16671 573 aa17.18■□□□□ 0.34
CPNE1-228ENST00000498814 FAM187BQ17R55 369 aa17.18■□□□□ 0.34
CPNE1-228ENST00000498814 CSPP1Q1MSJ5 1256 aa17.18■□□□□ 0.34
CPNE1-228ENST00000498814 PPP4R3CPQ6ZMV5 832 aa17.18■□□□□ 0.34
CPNE1-228ENST00000498814 SLC24A5Q71RS6 500 aa17.18■□□□□ 0.34
CPNE1-228ENST00000498814 MYOCDQ8IZQ8 938 aa17.18■□□□□ 0.34
CPNE1-228ENST00000498814 DDX12PQ92771 950 aa17.18■□□□□ 0.34
CPNE1-228ENST00000498814 TRAIPQ9BWF2 469 aa17.18■□□□□ 0.34
CPNE1-228ENST00000498814 LRRC27Q9C0I9 530 aa17.18■□□□□ 0.34
CPNE1-228ENST00000498814 FZD8Q9H461 694 aa17.18■□□□□ 0.34
CPNE1-228ENST00000498814 KMT5AQ9NQR1 393 aa17.18■□□□□ 0.34
CPNE1-228ENST00000498814 DACT1Q9NYF0 836 aa17.18■□□□□ 0.34
CPNE1-228ENST00000498814 LARSQ9P2J5 1176 aaKnown RBP17.18■□□□□ 0.34
CPNE1-228ENST00000498814 USP25Q9UHP3 1055 aa17.18■□□□□ 0.34
CPNE1-228ENST00000498814 ADGRA3Q8IWK6 1321 aa17.18■□□□□ 0.34
CPNE1-228ENST00000498814 CCDC169A6NNP5 214 aa17.17■□□□□ 0.34
CPNE1-228ENST00000498814 TSPAN1O60635 241 aa17.17■□□□□ 0.34
CPNE1-228ENST00000498814 FAM13AO94988 1023 aa17.17■□□□□ 0.34
CPNE1-228ENST00000498814 GJB5O95377 273 aa17.17■□□□□ 0.34
CPNE1-228ENST00000498814 AXLP30530 894 aa17.17■□□□□ 0.34
CPNE1-228ENST00000498814 HOXA11P31270 313 aaPredicted RBP17.17■□□□□ 0.34
CPNE1-228ENST00000498814 SARSP49591 514 aaKnown RBP17.17■□□□□ 0.34
CPNE1-228ENST00000498814 SMTNP53814 917 aa17.17■□□□□ 0.34
CPNE1-228ENST00000498814 FAM189BP81408 668 aa17.17■□□□□ 0.34
CPNE1-228ENST00000498814 AMPD3Q01432 767 aa17.17■□□□□ 0.34
CPNE1-228ENST00000498814 NCBP1Q09161 790 aaKnown RBP17.17■□□□□ 0.34
CPNE1-228ENST00000498814 MAPK6Q16659 721 aa17.17■□□□□ 0.34
CPNE1-228ENST00000498814 DYMQ7RTS9 669 aa17.17■□□□□ 0.34
CPNE1-228ENST00000498814 CRIPAKQ8N1N5 446 aa17.17■□□□□ 0.34
CPNE1-228ENST00000498814 MRPS27Q92552 414 aaKnown RBP17.17■□□□□ 0.34
CPNE1-228ENST00000498814 DNAJC19Q96DA6 116 aa17.17■□□□□ 0.34
CPNE1-228ENST00000498814 PRIMPOLQ96LW4 560 aa17.17■□□□□ 0.34
CPNE1-228ENST00000498814 CCDC113Q9H0I3 377 aa17.17■□□□□ 0.34
CPNE1-228ENST00000498814 PARVGQ9HBI0 331 aa17.17■□□□□ 0.34
CPNE1-228ENST00000498814 PRMT7Q9NVM4 692 aaPredicted RBP17.17■□□□□ 0.34
CPNE1-228ENST00000498814 RNF216Q9NWF9 866 aaPredicted RBP17.17■□□□□ 0.34
CPNE1-228ENST00000498814 ARHGAP28Q9P2N2 729 aa17.17■□□□□ 0.34
CPNE1-228ENST00000498814 PIN4Q9Y237 131 aaKnown RBP17.17■□□□□ 0.34
CPNE1-228ENST00000498814 PCDHA11Q9Y5I1 949 aa17.17■□□□□ 0.34
CPNE1-228ENST00000498814 PHLPP2Q6ZVD8 1323 aa17.17■□□□□ 0.34
CPNE1-228ENST00000498814 GOLGA6L4A6NEF3 574 aa17.16■□□□□ 0.34
CPNE1-228ENST00000498814 SOX1O00570 391 aaPredicted RBP17.16■□□□□ 0.34
CPNE1-228ENST00000498814 TBCAO75347 108 aaKnown RBP17.16■□□□□ 0.34
CPNE1-228ENST00000498814 SLFN14P0C7P3 912 aa17.16■□□□□ 0.34
CPNE1-228ENST00000498814 SYKP43405 635 aa17.16■□□□□ 0.34
CPNE1-228ENST00000498814 NDUFA8P51970 172 aa17.16■□□□□ 0.34
CPNE1-228ENST00000498814 RAB30Q15771 203 aa17.16■□□□□ 0.34
CPNE1-228ENST00000498814 TMCO2Q7Z6W1 182 aaPredicted RBP17.16■□□□□ 0.34
CPNE1-228ENST00000498814 NPAS4Q8IUM7 802 aa17.16■□□□□ 0.34
CPNE1-228ENST00000498814 MYCT1Q8N699 235 aa17.16■□□□□ 0.34
CPNE1-228ENST00000498814 FSIP1Q8NA03 581 aa17.16■□□□□ 0.34
CPNE1-228ENST00000498814 KCNN1Q92952 543 aa17.16■□□□□ 0.34
CPNE1-228ENST00000498814 CCDC51Q96ER9 411 aa17.16■□□□□ 0.34
CPNE1-228ENST00000498814 KIFC3Q9BVG8 833 aa17.16■□□□□ 0.34
CPNE1-228ENST00000498814 TMEM134Q9H6X4 195 aa17.16■□□□□ 0.34
CPNE1-228ENST00000498814 A0A0U1RQF3 1178 aa17.15■□□□□ 0.34
CPNE1-228ENST00000498814 K7ERI5 159 aa17.15■□□□□ 0.34
CPNE1-228ENST00000498814 ACKR2O00590 384 aa17.15■□□□□ 0.34
CPNE1-228ENST00000498814 SLC16A4O15374 487 aa17.15■□□□□ 0.34
CPNE1-228ENST00000498814 ACTN4O43707 911 aaKnown RBP17.15■□□□□ 0.34
CPNE1-228ENST00000498814 PRKCBP05771 671 aa17.15■□□□□ 0.34
CPNE1-228ENST00000498814 STAG3L1P0CL83 205 aa17.15■□□□□ 0.34
CPNE1-228ENST00000498814 ARF4P18085 180 aaPredicted RBP17.15■□□□□ 0.34
CPNE1-228ENST00000498814 SCP2P22307 547 aa17.15■□□□□ 0.34
CPNE1-228ENST00000498814 RABGGTBP53611 331 aa17.15■□□□□ 0.34
CPNE1-228ENST00000498814 NCKAP1LP55160 1127 aa17.15■□□□□ 0.34
CPNE1-228ENST00000498814 HTRA4P83105 476 aaPredicted RBP17.15■□□□□ 0.34
CPNE1-228ENST00000498814 CNNM4Q6P4Q7 775 aa17.15■□□□□ 0.34
CPNE1-228ENST00000498814 CEP57L1Q8IYX8 460 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms