RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 PHKA2P46019 1235 aa10.3□□□□□ -0.76
CCDC171-209ENST00000498725 AK2P54819 239 aa10.3□□□□□ -0.76
CCDC171-209ENST00000498725 PRKCEQ02156 737 aa10.3□□□□□ -0.76
CCDC171-209ENST00000498725 TBC1D8BQ0IIM8 1120 aa10.3□□□□□ -0.76
CCDC171-209ENST00000498725 AP3B2Q13367 1082 aa10.3□□□□□ -0.76
CCDC171-209ENST00000498725 DRP2Q13474 957 aa10.3□□□□□ -0.76
CCDC171-209ENST00000498725 GIT2Q14161 759 aa10.3□□□□□ -0.76
CCDC171-209ENST00000498725 PUM1Q14671 1186 aaKnown RBP eCLIP10.3□□□□□ -0.76
CCDC171-209ENST00000498725 UGCGQ16739 394 aa10.3□□□□□ -0.76
CCDC171-209ENST00000498725 RSPO4Q2I0M5 234 aaPredicted RBP10.3□□□□□ -0.76
CCDC171-209ENST00000498725 MTERF2Q49AM1 385 aa10.3□□□□□ -0.76
CCDC171-209ENST00000498725 PRR16Q569H4 304 aa10.3□□□□□ -0.76
CCDC171-209ENST00000498725 ZNF746Q6NUN9 644 aaPredicted RBP10.3□□□□□ -0.76
CCDC171-209ENST00000498725 GLB1LQ6UWU2 654 aa10.3□□□□□ -0.76
CCDC171-209ENST00000498725 SPATA31D4Q6ZUB0 917 aa10.3□□□□□ -0.76
CCDC171-209ENST00000498725 PPFIBP1Q86W92 1011 aa10.3□□□□□ -0.76
CCDC171-209ENST00000498725 GLYCTKQ8IVS8 523 aa10.3□□□□□ -0.76
CCDC171-209ENST00000498725 LINC01465Q8N7H1 131 aa10.3□□□□□ -0.76
CCDC171-209ENST00000498725 GPR152Q8TDT2 470 aa10.3□□□□□ -0.76
CCDC171-209ENST00000498725 FAM167AQ96KS9 214 aa10.3□□□□□ -0.76
CCDC171-209ENST00000498725 TCEANC2Q96MN5 208 aa10.3□□□□□ -0.76
CCDC171-209ENST00000498725 NRBP2Q9NSY0 501 aa10.3□□□□□ -0.76
CCDC171-209ENST00000498725 TBC1D22BQ9NU19 505 aa10.3□□□□□ -0.76
CCDC171-209ENST00000498725 IGSF9Q9P2J2 1179 aa10.3□□□□□ -0.76
CCDC171-209ENST00000498725 ZNF292O60281 2723 aa10.3□□□□□ -0.76
CCDC171-209ENST00000498725 PATJQ8NI35 1801 aa10.3□□□□□ -0.76
CCDC171-209ENST00000498725 A0A087WZ62 844 aa10.29□□□□□ -0.76
CCDC171-209ENST00000498725 SLC27A2O14975 620 aa10.29□□□□□ -0.76
CCDC171-209ENST00000498725 INPPL1O15357 1258 aa10.29□□□□□ -0.76
CCDC171-209ENST00000498725 LRRN2O75325 713 aa10.29□□□□□ -0.76
CCDC171-209ENST00000498725 RFPL2O75678 378 aa10.29□□□□□ -0.76
CCDC171-209ENST00000498725 DDHD2O94830 711 aa10.29□□□□□ -0.76
CCDC171-209ENST00000498725 SP9P0CG40 484 aa10.29□□□□□ -0.76
CCDC171-209ENST00000498725 CLK2P49760 499 aaKnown RBP10.29□□□□□ -0.76
CCDC171-209ENST00000498725 RTN1Q16799 776 aa10.29□□□□□ -0.76
CCDC171-209ENST00000498725 PPP1R18Q6NYC8 613 aa10.29□□□□□ -0.76
CCDC171-209ENST00000498725 SMAP1Q8IYB5 467 aaPredicted RBP10.29□□□□□ -0.76
CCDC171-209ENST00000498725 SLC44A3Q8N4M1 653 aa10.29□□□□□ -0.76
CCDC171-209ENST00000498725 RUBCNQ92622 972 aa10.29□□□□□ -0.76
CCDC171-209ENST00000498725 GJA10Q969M2 543 aa10.29□□□□□ -0.76
CCDC171-209ENST00000498725 FAM193BQ96PV7 902 aaPredicted RBP10.29□□□□□ -0.76
CCDC171-209ENST00000498725 MYADMQ96S97 322 aa10.29□□□□□ -0.76
CCDC171-209ENST00000498725 FDXACB1Q9BRP7 624 aaPredicted RBP10.29□□□□□ -0.76
CCDC171-209ENST00000498725 GCOM2Q9BZD3 368 aaPredicted RBP10.29□□□□□ -0.76
CCDC171-209ENST00000498725 FOXQ1Q9C009 403 aa10.29□□□□□ -0.76
CCDC171-209ENST00000498725 SEMA4AQ9H3S1 761 aa10.29□□□□□ -0.76
CCDC171-209ENST00000498725 PIDD1Q9HB75 910 aa10.29□□□□□ -0.76
CCDC171-209ENST00000498725 MRPL17Q9NRX2 175 aaKnown RBP10.29□□□□□ -0.76
CCDC171-209ENST00000498725 BARHL2Q9NY43 387 aa10.29□□□□□ -0.76
CCDC171-209ENST00000498725 WNT16Q9UBV4 365 aa10.29□□□□□ -0.76
CCDC171-209ENST00000498725 SEPT9Q9UHD8 586 aaPredicted RBP10.29□□□□□ -0.76
CCDC171-209ENST00000498725 SIT1Q9Y3P8 196 aa10.29□□□□□ -0.76
CCDC171-209ENST00000498725 IRAK3Q9Y616 596 aa10.29□□□□□ -0.76
CCDC171-209ENST00000498725 FRYLO94915 3013 aa10.29□□□□□ -0.76
CCDC171-209ENST00000498725 CLUHO75153 1309 aa10.29□□□□□ -0.76
CCDC171-209ENST00000498725 DOCK8Q8NF50 2099 aa10.29□□□□□ -0.76
CCDC171-209ENST00000498725 CACNA1AO00555 2505 aa10.28□□□□□ -0.76
CCDC171-209ENST00000498725 POTEMA6NI47 508 aa10.28□□□□□ -0.76
CCDC171-209ENST00000498725 GOLGA8AA7E2F4 631 aa10.28□□□□□ -0.76
CCDC171-209ENST00000498725 GOLGA8BA8MQT2 603 aa10.28□□□□□ -0.76
CCDC171-209ENST00000498725 OFD1O75665 1012 aa10.28□□□□□ -0.76
CCDC171-209ENST00000498725 AFF1P51825 1210 aaKnown RBP10.28□□□□□ -0.76
CCDC171-209ENST00000498725 NONOQ15233 471 aaKnown RBP eCLIP10.28□□□□□ -0.76
CCDC171-209ENST00000498725 ZC3H14Q6PJT7 736 aaKnown RBP10.28□□□□□ -0.76
CCDC171-209ENST00000498725 APOA5Q6Q788 366 aa10.28□□□□□ -0.76
CCDC171-209ENST00000498725 POTEGQ6S5H5 508 aa10.28□□□□□ -0.76
CCDC171-209ENST00000498725 GET4Q7L5D6 327 aaPredicted RBP10.28□□□□□ -0.76
CCDC171-209ENST00000498725 TAS1R1Q7RTX1 841 aa10.28□□□□□ -0.76
CCDC171-209ENST00000498725 CATSPER4Q7RTX7 472 aa10.28□□□□□ -0.76
CCDC171-209ENST00000498725 RHPN2Q8IUC4 686 aa10.28□□□□□ -0.76
CCDC171-209ENST00000498725 KSR1Q8IVT5 923 aa10.28□□□□□ -0.76
CCDC171-209ENST00000498725 URGCPQ8TCY9 931 aa10.28□□□□□ -0.76
CCDC171-209ENST00000498725 SMG7Q92540 1137 aaKnown RBP10.28□□□□□ -0.76
CCDC171-209ENST00000498725 NLRP4Q96MN2 994 aa10.28□□□□□ -0.76
CCDC171-209ENST00000498725 MTA3Q9BTC8 594 aa10.28□□□□□ -0.76
CCDC171-209ENST00000498725 DISC1Q9NRI5 854 aa10.28□□□□□ -0.76
CCDC171-209ENST00000498725 FAM105AQ9NUU6 356 aa10.28□□□□□ -0.76
CCDC171-209ENST00000498725 RBM28Q9NW13 759 aaKnown RBP10.28□□□□□ -0.76
CCDC171-209ENST00000498725 NCDNQ9UBB6 729 aa10.28□□□□□ -0.76
CCDC171-209ENST00000498725 BRPF3Q9ULD4 1205 aa10.28□□□□□ -0.76
CCDC171-209ENST00000498725 FAN1Q9Y2M0 1017 aa10.28□□□□□ -0.76
CCDC171-209ENST00000498725 PRG3Q9Y2Y8 225 aaPredicted RBP10.28□□□□□ -0.76
CCDC171-209ENST00000498725 GVINP1Q7Z2Y8 2422 aa10.27□□□□□ -0.76
CCDC171-209ENST00000498725 WDR64B1ANS9 1081 aa10.27□□□□□ -0.77
CCDC171-209ENST00000498725 NRP1O14786 923 aa10.27□□□□□ -0.77
CCDC171-209ENST00000498725 ZBTB43O43298 467 aa10.27□□□□□ -0.77
CCDC171-209ENST00000498725 POMCP01189 267 aa10.27□□□□□ -0.77
CCDC171-209ENST00000498725 ALDH2P05091 517 aa10.27□□□□□ -0.77
CCDC171-209ENST00000498725 URODP06132 367 aa10.27□□□□□ -0.77
CCDC171-209ENST00000498725 CYP3A4P08684 503 aa10.27□□□□□ -0.77
CCDC171-209ENST00000498725 SRFP11831 508 aa10.27□□□□□ -0.77
CCDC171-209ENST00000498725 SFPQP23246 707 aaKnown RBP eCLIP10.27□□□□□ -0.77
CCDC171-209ENST00000498725 DNM2P50570 870 aa10.27□□□□□ -0.77
CCDC171-209ENST00000498725 SETQ01105 290 aaPredicted RBP10.27□□□□□ -0.77
CCDC171-209ENST00000498725 FUT2Q10981 343 aa10.27□□□□□ -0.77
CCDC171-209ENST00000498725 CREB3L3Q68CJ9 461 aa10.27□□□□□ -0.77
CCDC171-209ENST00000498725 DCLRE1AQ6PJP8 1040 aa10.27□□□□□ -0.77
CCDC171-209ENST00000498725 C15orf39Q6ZRI6 1047 aa10.27□□□□□ -0.77
CCDC171-209ENST00000498725 PALB2Q86YC2 1186 aa10.27□□□□□ -0.77
CCDC171-209ENST00000498725 C1orf210Q8IVY1 113 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms