RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 UBA7P41226 1012 aa18.51■□□□□ 0.55
ABCF3-218ENST00000498136 POU5F1BQ06416 359 aa18.51■□□□□ 0.55
ABCF3-218ENST00000498136 LONRF3Q496Y0 759 aa18.51■□□□□ 0.55
ABCF3-218ENST00000498136 FOXD4L5Q5VV16 416 aaPredicted RBP18.51■□□□□ 0.55
ABCF3-218ENST00000498136 CABP7Q86V35 215 aa18.51■□□□□ 0.55
ABCF3-218ENST00000498136 ZBTB8OSQ8IWT0 167 aa18.51■□□□□ 0.55
ABCF3-218ENST00000498136 FOXD4L4Q8WXT5 416 aaPredicted RBP18.51■□□□□ 0.55
ABCF3-218ENST00000498136 C11orf84Q9BUA3 381 aaPredicted RBP18.51■□□□□ 0.55
ABCF3-218ENST00000498136 POLD4Q9HCU8 107 aa18.51■□□□□ 0.55
ABCF3-218ENST00000498136 FAM105AQ9NUU6 356 aa18.51■□□□□ 0.55
ABCF3-218ENST00000498136 RB1P06400 928 aa18.5■□□□□ 0.55
ABCF3-218ENST00000498136 POU3F3P20264 500 aaPredicted RBP18.5■□□□□ 0.55
ABCF3-218ENST00000498136 LONP1P36776 959 aaKnown RBP18.5■□□□□ 0.55
ABCF3-218ENST00000498136 RAB27AP51159 221 aa18.5■□□□□ 0.55
ABCF3-218ENST00000498136 MBTD1Q05BQ5 628 aa18.5■□□□□ 0.55
ABCF3-218ENST00000498136 PCBP1Q15365 356 aaKnown RBP eCLIP18.5■□□□□ 0.55
ABCF3-218ENST00000498136 PTPROQ16827 1216 aa18.5■□□□□ 0.55
ABCF3-218ENST00000498136 HELQQ8TDG4 1101 aa18.5■□□□□ 0.55
ABCF3-218ENST00000498136 CALML4Q96GE6 196 aa18.5■□□□□ 0.55
ABCF3-218ENST00000498136 CPB2Q96IY4 423 aa18.5■□□□□ 0.55
ABCF3-218ENST00000498136 IFT74Q96LB3 600 aa18.5■□□□□ 0.55
ABCF3-218ENST00000498136 TMEM117Q9H0C3 514 aa18.5■□□□□ 0.55
ABCF3-218ENST00000498136 PRRC2BQ5JSZ5 2229 aaKnown RBP18.49■□□□□ 0.55
ABCF3-218ENST00000498136 TRANK1O15050 2925 aa18.49■□□□□ 0.55
ABCF3-218ENST00000498136 TSPAN1O60635 241 aa18.49■□□□□ 0.55
ABCF3-218ENST00000498136 CSPG5O95196 566 aa18.49■□□□□ 0.55
ABCF3-218ENST00000498136 LINC00271P0C7V0 271 aa18.49■□□□□ 0.55
ABCF3-218ENST00000498136 LIG1P18858 919 aa18.49■□□□□ 0.55
ABCF3-218ENST00000498136 MARCKSP29966 332 aaPredicted RBP18.49■□□□□ 0.55
ABCF3-218ENST00000498136 AXLP30530 894 aa18.49■□□□□ 0.55
ABCF3-218ENST00000498136 GRIN1Q05586 938 aa18.49■□□□□ 0.55
ABCF3-218ENST00000498136 PPP2R5AQ15172 486 aa18.49■□□□□ 0.55
ABCF3-218ENST00000498136 HYIQ5T013 277 aa18.49■□□□□ 0.55
ABCF3-218ENST00000498136 NOTUMQ6P988 496 aa18.49■□□□□ 0.55
ABCF3-218ENST00000498136 KCNK18Q7Z418 384 aa18.49■□□□□ 0.55
ABCF3-218ENST00000498136 IFNLR1Q8IU57 520 aaPredicted RBP18.49■□□□□ 0.55
ABCF3-218ENST00000498136 DEPTORQ8TB45 409 aa18.49■□□□□ 0.55
ABCF3-218ENST00000498136 KIFAP3Q92845 792 aa18.49■□□□□ 0.55
ABCF3-218ENST00000498136 LPPQ93052 612 aa18.49■□□□□ 0.55
ABCF3-218ENST00000498136 CASD1Q96PB1 797 aa18.49■□□□□ 0.55
ABCF3-218ENST00000498136 PNMA5Q96PV4 448 aa18.49■□□□□ 0.55
ABCF3-218ENST00000498136 NFKBIZQ9BYH8 718 aa18.49■□□□□ 0.55
ABCF3-218ENST00000498136 AAASQ9NRG9 546 aa18.49■□□□□ 0.55
ABCF3-218ENST00000498136 TYW1Q9NV66 732 aaKnown RBP18.49■□□□□ 0.55
ABCF3-218ENST00000498136 LMCD1Q9NZU5 365 aa18.49■□□□□ 0.55
ABCF3-218ENST00000498136 C5orf67F2Z3F1 127 aa18.48■□□□□ 0.55
ABCF3-218ENST00000498136 ATF7P17544 494 aaPredicted RBP18.48■□□□□ 0.55
ABCF3-218ENST00000498136 HOXA11P31270 313 aaPredicted RBP18.48■□□□□ 0.55
ABCF3-218ENST00000498136 NAMPTP43490 491 aa18.48■□□□□ 0.55
ABCF3-218ENST00000498136 TMEM132AQ24JP5 1023 aa18.48■□□□□ 0.55
ABCF3-218ENST00000498136 ZNF598Q86UK7 904 aaKnown RBP18.48■□□□□ 0.55
ABCF3-218ENST00000498136 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.48■□□□□ 0.55
ABCF3-218ENST00000498136 LRRC43Q8N309 656 aa18.48■□□□□ 0.55
ABCF3-218ENST00000498136 BSNDQ8WZ55 320 aa18.48■□□□□ 0.55
ABCF3-218ENST00000498136 PGBD4Q96DM1 585 aa18.48■□□□□ 0.55
ABCF3-218ENST00000498136 MRPL38Q96DV4 380 aaKnown RBP18.48■□□□□ 0.55
ABCF3-218ENST00000498136 TRAIPQ9BWF2 469 aa18.48■□□□□ 0.55
ABCF3-218ENST00000498136 PLVAPQ9BX97 442 aa18.48■□□□□ 0.55
ABCF3-218ENST00000498136 C2orf40Q9H1Z8 148 aa18.48■□□□□ 0.55
ABCF3-218ENST00000498136 RNF19AQ9NV58 838 aa18.48■□□□□ 0.55
ABCF3-218ENST00000498136 HCSTQ9UBK5 93 aa18.48■□□□□ 0.55
ABCF3-218ENST00000498136 PCDHB2Q9Y5E7 798 aa18.48■□□□□ 0.55
ABCF3-218ENST00000498136 PCDHB12Q9Y5F1 795 aa18.48■□□□□ 0.55
ABCF3-218ENST00000498136 MYH11P35749 1972 aa18.48■□□□□ 0.55
ABCF3-218ENST00000498136 HIP1RO75146 1068 aa18.47■□□□□ 0.55
ABCF3-218ENST00000498136 PDIA4P13667 645 aaKnown RBP18.47■□□□□ 0.55
ABCF3-218ENST00000498136 RAD51AP2Q09MP3 1159 aa18.47■□□□□ 0.55
ABCF3-218ENST00000498136 PTPAQ15257 358 aa18.47■□□□□ 0.55
ABCF3-218ENST00000498136 CLLU1OSQ5K130 101 aa18.47■□□□□ 0.55
ABCF3-218ENST00000498136 RINT1Q6NUQ1 792 aa18.47■□□□□ 0.55
ABCF3-218ENST00000498136 KCTD17Q8N5Z5 321 aa18.47■□□□□ 0.55
ABCF3-218ENST00000498136 USP28Q96RU2 1077 aa18.47■□□□□ 0.55
ABCF3-218ENST00000498136 RUSC1Q9BVN2 902 aa18.47■□□□□ 0.55
ABCF3-218ENST00000498136 TRIM6Q9C030 488 aaPredicted RBP18.47■□□□□ 0.55
ABCF3-218ENST00000498136 ALG13Q9NP73 1137 aaKnown RBP18.47■□□□□ 0.55
ABCF3-218ENST00000498136 PRDM6Q9NQX0 595 aa18.47■□□□□ 0.55
ABCF3-218ENST00000498136 PRMT7Q9NVM4 692 aaPredicted RBP18.47■□□□□ 0.55
ABCF3-218ENST00000498136 INPP5FQ9Y2H2 1132 aa18.47■□□□□ 0.55
ABCF3-218ENST00000498136 CCDC169A6NNP5 214 aa18.46■□□□□ 0.55
ABCF3-218ENST00000498136 GRM6O15303 877 aa18.46■□□□□ 0.55
ABCF3-218ENST00000498136 B4GALT5O43286 388 aa18.46■□□□□ 0.55
ABCF3-218ENST00000498136 SLC26A4O43511 780 aa18.46■□□□□ 0.55
ABCF3-218ENST00000498136 PLA2G4BP0C869 781 aa18.46■□□□□ 0.55
ABCF3-218ENST00000498136 ARF4P18085 180 aaPredicted RBP18.46■□□□□ 0.55
ABCF3-218ENST00000498136 LAG3P18627 525 aa18.46■□□□□ 0.55
ABCF3-218ENST00000498136 DHX8Q14562 1220 aaKnown RBP18.46■□□□□ 0.55
ABCF3-218ENST00000498136 KARSQ15046 597 aaKnown RBP18.46■□□□□ 0.55
ABCF3-218ENST00000498136 TMEM119Q4V9L6 283 aa18.46■□□□□ 0.55
ABCF3-218ENST00000498136 SPECC1Q5M775 1068 aa18.46■□□□□ 0.55
ABCF3-218ENST00000498136 CDCA2Q69YH5 1023 aaPredicted RBP18.46■□□□□ 0.55
ABCF3-218ENST00000498136 GLB1LQ6UWU2 654 aa18.46■□□□□ 0.55
ABCF3-218ENST00000498136 THNSL1Q8IYQ7 743 aa18.46■□□□□ 0.55
ABCF3-218ENST00000498136 KLHL23Q8NBE8 558 aa18.46■□□□□ 0.55
ABCF3-218ENST00000498136 COLGALT1Q8NBJ5 622 aa18.46■□□□□ 0.55
ABCF3-218ENST00000498136 P2RX5Q93086 422 aa18.46■□□□□ 0.55
ABCF3-218ENST00000498136 DRC1Q96MC2 740 aa18.46■□□□□ 0.55
ABCF3-218ENST00000498136 ZNF396Q96N95 335 aaPredicted RBP18.46■□□□□ 0.55
ABCF3-218ENST00000498136 MRPL9Q9BYD2 267 aaKnown RBP18.46■□□□□ 0.55
ABCF3-218ENST00000498136 CSRNP2Q9H175 543 aa18.46■□□□□ 0.55
ABCF3-218ENST00000498136 SRPRBQ9Y5M8 271 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms