RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 ENTPD7Q9NQZ7 604 aa25.24■■□□□ 1.63
CDKN2A-208ENST00000498124 PIN4Q9Y237 131 aaKnown RBP25.24■■□□□ 1.63
CDKN2A-208ENST00000498124 FSD2A1L4K1 749 aa25.23■■□□□ 1.63
CDKN2A-208ENST00000498124 JAK2O60674 1132 aa25.23■■□□□ 1.63
CDKN2A-208ENST00000498124 HMGN5P82970 282 aaKnown RBP25.23■■□□□ 1.63
CDKN2A-208ENST00000498124 CBX2Q14781 532 aaPredicted RBP25.23■■□□□ 1.63
CDKN2A-208ENST00000498124 EPHA7Q15375 998 aa25.23■■□□□ 1.63
CDKN2A-208ENST00000498124 TWF2Q6IBS0 349 aaKnown RBP25.23■■□□□ 1.63
CDKN2A-208ENST00000498124 TMEM173Q86WV6 379 aaPredicted RBP25.23■■□□□ 1.63
CDKN2A-208ENST00000498124 C4orf19Q8IY42 314 aa25.23■■□□□ 1.63
CDKN2A-208ENST00000498124 CEP170P1Q96L14 293 aa25.23■■□□□ 1.63
CDKN2A-208ENST00000498124 JPH2Q9BR39 696 aaPredicted RBP25.23■■□□□ 1.63
CDKN2A-208ENST00000498124 MRPL9Q9BYD2 267 aaKnown RBP25.23■■□□□ 1.63
CDKN2A-208ENST00000498124 NGRNQ9NPE2 291 aaKnown RBP25.23■■□□□ 1.63
CDKN2A-208ENST00000498124 RGL1Q9NZL6 768 aa25.23■■□□□ 1.63
CDKN2A-208ENST00000498124 PUF60Q9UHX1 559 aaKnown RBP25.23■■□□□ 1.63
CDKN2A-208ENST00000498124 COL4A3BPQ9Y5P4 624 aa25.23■■□□□ 1.63
CDKN2A-208ENST00000498124 TECTAO75443 2155 aa25.22■■□□□ 1.63
CDKN2A-208ENST00000498124 BCAR1P56945 870 aa25.22■■□□□ 1.63
CDKN2A-208ENST00000498124 SYCE2Q6PIF2 218 aa25.22■■□□□ 1.63
CDKN2A-208ENST00000498124 CATSPER4Q7RTX7 472 aa25.22■■□□□ 1.63
CDKN2A-208ENST00000498124 SLC7A3Q8WY07 619 aa25.22■■□□□ 1.63
CDKN2A-208ENST00000498124 TMEM143Q96AN5 459 aa25.22■■□□□ 1.63
CDKN2A-208ENST00000498124 NAP1L4Q99733 375 aaKnown RBP25.22■■□□□ 1.63
CDKN2A-208ENST00000498124 INO80BQ9C086 356 aaPredicted RBP25.22■■□□□ 1.63
CDKN2A-208ENST00000498124 S1PR5Q9H228 398 aa25.22■■□□□ 1.63
CDKN2A-208ENST00000498124 MINDY3Q9H8M7 445 aa25.22■■□□□ 1.63
CDKN2A-208ENST00000498124 AGPAT5Q9NUQ2 364 aa25.22■■□□□ 1.63
CDKN2A-208ENST00000498124 FAM105AQ9NUU6 356 aa25.22■■□□□ 1.63
CDKN2A-208ENST00000498124 PPME1Q9Y570 386 aa25.22■■□□□ 1.63
CDKN2A-208ENST00000498124 WNT7AO00755 349 aa25.21■■□□□ 1.63
CDKN2A-208ENST00000498124 ZBTB39O15060 712 aa25.21■■□□□ 1.63
CDKN2A-208ENST00000498124 DKC1O60832 514 aaKnown RBP eCLIP25.21■■□□□ 1.63
CDKN2A-208ENST00000498124 YWHABP31946 246 aaKnown RBP25.21■■□□□ 1.63
CDKN2A-208ENST00000498124 KRT2P35908 639 aa25.21■■□□□ 1.63
CDKN2A-208ENST00000498124 LONRF3Q496Y0 759 aa25.21■■□□□ 1.63
CDKN2A-208ENST00000498124 NCAPH2Q6IBW4 605 aa25.21■■□□□ 1.63
CDKN2A-208ENST00000498124 ANKRD54Q6NXT1 300 aa25.21■■□□□ 1.63
CDKN2A-208ENST00000498124 PRPF31Q8WWY3 499 aaKnown RBP25.21■■□□□ 1.63
CDKN2A-208ENST00000498124 SNX21Q969T3 373 aa25.21■■□□□ 1.63
CDKN2A-208ENST00000498124 DYDC2Q96IM9 177 aa25.21■■□□□ 1.63
CDKN2A-208ENST00000498124 BMP2KQ9NSY1 1161 aaPredicted RBP25.21■■□□□ 1.63
CDKN2A-208ENST00000498124 ZNF318Q5VUA4 2279 aa25.21■■□□□ 1.63
CDKN2A-208ENST00000498124 NT5C1B-RDH14C9J2C7 533 aa25.2■■□□□ 1.62
CDKN2A-208ENST00000498124 B4GALT3O60512 393 aa25.2■■□□□ 1.62
CDKN2A-208ENST00000498124 ZNF623O75123 536 aa25.2■■□□□ 1.62
CDKN2A-208ENST00000498124 RFC5P40937 340 aa25.2■■□□□ 1.62
CDKN2A-208ENST00000498124 POLGP54098 1239 aaPredicted RBP25.2■■□□□ 1.62
CDKN2A-208ENST00000498124 KRT17Q04695 432 aa25.2■■□□□ 1.62
CDKN2A-208ENST00000498124 LLGL2Q6P1M3 1020 aa25.2■■□□□ 1.62
CDKN2A-208ENST00000498124 BCL7CQ8WUZ0 217 aaPredicted RBP25.2■■□□□ 1.62
CDKN2A-208ENST00000498124 PHF7Q9BWX1 381 aaPredicted RBP25.2■■□□□ 1.62
CDKN2A-208ENST00000498124 TBC1D13Q9NVG8 400 aa25.2■■□□□ 1.62
CDKN2A-208ENST00000498124 C2orf71A6NGG8 1288 aa25.19■■□□□ 1.62
CDKN2A-208ENST00000498124 TECP42680 631 aa25.19■■□□□ 1.62
CDKN2A-208ENST00000498124 CYP4A11Q02928 519 aa25.19■■□□□ 1.62
CDKN2A-208ENST00000498124 LAMTOR4Q0VGL1 99 aa25.19■■□□□ 1.62
CDKN2A-208ENST00000498124 CTTNQ14247 550 aaKnown RBP25.19■■□□□ 1.62
CDKN2A-208ENST00000498124 EMC2Q15006 297 aa25.19■■□□□ 1.62
CDKN2A-208ENST00000498124 TMC7Q7Z402 723 aa25.19■■□□□ 1.62
CDKN2A-208ENST00000498124 MRPL43Q8N983 215 aaKnown RBP25.19■■□□□ 1.62
CDKN2A-208ENST00000498124 PSPC1Q8WXF1 523 aaKnown RBP25.19■■□□□ 1.62
CDKN2A-208ENST00000498124 RSPH1Q8WYR4 309 aa25.19■■□□□ 1.62
CDKN2A-208ENST00000498124 XPNPEP1Q9NQW7 623 aa25.19■■□□□ 1.62
CDKN2A-208ENST00000498124 ZC3H11AO75152 810 aaKnown RBP eCLIP25.18■■□□□ 1.62
CDKN2A-208ENST00000498124 OFD1O75665 1012 aa25.18■■□□□ 1.62
CDKN2A-208ENST00000498124 SKIP12755 728 aa25.18■■□□□ 1.62
CDKN2A-208ENST00000498124 HOXA11P31270 313 aaPredicted RBP25.18■■□□□ 1.62
CDKN2A-208ENST00000498124 RAB27AP51159 221 aa25.18■■□□□ 1.62
CDKN2A-208ENST00000498124 SMC1AQ14683 1233 aaKnown RBP25.18■■□□□ 1.62
CDKN2A-208ENST00000498124 NOMO2Q5JPE7 1267 aa25.18■■□□□ 1.62
CDKN2A-208ENST00000498124 UBXN11Q5T124 520 aa25.18■■□□□ 1.62
CDKN2A-208ENST00000498124 GLB1LQ6UWU2 654 aa25.18■■□□□ 1.62
CDKN2A-208ENST00000498124 HFE2Q6ZVN8 426 aa25.18■■□□□ 1.62
CDKN2A-208ENST00000498124 SLFN12Q8IYM2 578 aa25.18■■□□□ 1.62
CDKN2A-208ENST00000498124 FAM184AQ8NB25 1140 aa25.18■■□□□ 1.62
CDKN2A-208ENST00000498124 ZSWIM4Q9H7M6 989 aa25.18■■□□□ 1.62
CDKN2A-208ENST00000498124 NRDE2Q9H7Z3 1164 aa25.18■■□□□ 1.62
CDKN2A-208ENST00000498124 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.18■■□□□ 1.62
CDKN2A-208ENST00000498124 PCDHB2Q9Y5E7 798 aa25.18■■□□□ 1.62
CDKN2A-208ENST00000498124 SLITRK3O94933 977 aa25.17■■□□□ 1.62
CDKN2A-208ENST00000498124 SRGAP2CP0DJJ0 459 aa25.17■■□□□ 1.62
CDKN2A-208ENST00000498124 AGMOQ6ZNB7 445 aa25.17■■□□□ 1.62
CDKN2A-208ENST00000498124 SRGAP1Q7Z6B7 1085 aa25.17■■□□□ 1.62
CDKN2A-208ENST00000498124 APOL5Q9BWW9 433 aa25.17■■□□□ 1.62
CDKN2A-208ENST00000498124 VN1R3Q9BXE9 311 aa25.17■■□□□ 1.62
CDKN2A-208ENST00000498124 ZBP1Q9H171 429 aa25.17■■□□□ 1.62
CDKN2A-208ENST00000498124 CDH22Q9UJ99 828 aa25.17■■□□□ 1.62
CDKN2A-208ENST00000498124 INPP5FQ9Y2H2 1132 aa25.17■■□□□ 1.62
CDKN2A-208ENST00000498124 KIF3AQ9Y496 699 aa25.17■■□□□ 1.62
CDKN2A-208ENST00000498124 HCFC2Q9Y5Z7 792 aa25.17■■□□□ 1.62
CDKN2A-208ENST00000498124 BTBD18B2RXH4 712 aa25.16■■□□□ 1.62
CDKN2A-208ENST00000498124 K7ELQ4 463 aaPredicted RBP25.16■■□□□ 1.62
CDKN2A-208ENST00000498124 MARCH6O60337 910 aa25.16■■□□□ 1.62
CDKN2A-208ENST00000498124 CLASP2O75122 1294 aaKnown RBP25.16■■□□□ 1.62
CDKN2A-208ENST00000498124 SRGAP2BP0DMP2 458 aa25.16■■□□□ 1.62
CDKN2A-208ENST00000498124 HOXD11P31277 338 aaPredicted RBP25.16■■□□□ 1.62
CDKN2A-208ENST00000498124 ALDH7A1P49419 539 aaKnown RBP25.16■■□□□ 1.62
CDKN2A-208ENST00000498124 AFF1P51825 1210 aaKnown RBP25.16■■□□□ 1.62
CDKN2A-208ENST00000498124 TRIM29Q14134 588 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms