RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 RPS6KA1Q15418 735 aa13.53□□□□□ -0.24
AFF3-215ENST00000498090 RNF207Q6ZRF8 634 aa13.53□□□□□ -0.24
AFF3-215ENST00000498090 IRF2BP2Q7Z5L9 587 aa13.53□□□□□ -0.24
AFF3-215ENST00000498090 NCAPG2Q86XI2 1143 aa13.53□□□□□ -0.24
AFF3-215ENST00000498090 SFR1Q86XK3 245 aa13.53□□□□□ -0.24
AFF3-215ENST00000498090 PORCNQ9H237 461 aa13.53□□□□□ -0.24
AFF3-215ENST00000498090 RBM12Q9NTZ6 932 aaKnown RBP13.53□□□□□ -0.24
AFF3-215ENST00000498090 CYP39A1Q9NYL5 469 aa13.53□□□□□ -0.24
AFF3-215ENST00000498090 ADAMTS1Q9UHI8 967 aa13.53□□□□□ -0.24
AFF3-215ENST00000498090 VAV3Q9UKW4 847 aa13.53□□□□□ -0.24
AFF3-215ENST00000498090 LCTP09848 1927 aa13.53□□□□□ -0.24
AFF3-215ENST00000498090 MSH4O15457 936 aa13.53□□□□□ -0.24
AFF3-215ENST00000498090 SLC25A27O95847 323 aa13.53□□□□□ -0.24
AFF3-215ENST00000498090 FERP16591 822 aa13.53□□□□□ -0.24
AFF3-215ENST00000498090 PON1P27169 355 aa13.53□□□□□ -0.24
AFF3-215ENST00000498090 ZNF76P36508 570 aa13.53□□□□□ -0.24
AFF3-215ENST00000498090 TM4SF4P48230 202 aa13.53□□□□□ -0.24
AFF3-215ENST00000498090 INHBEP58166 350 aa13.53□□□□□ -0.24
AFF3-215ENST00000498090 UBXN2AP68543 259 aa13.53□□□□□ -0.24
AFF3-215ENST00000498090 SREBF2Q12772 1141 aa13.53□□□□□ -0.24
AFF3-215ENST00000498090 EPHA7Q15375 998 aa13.53□□□□□ -0.24
AFF3-215ENST00000498090 TAF1CQ15572 869 aaPredicted RBP13.53□□□□□ -0.24
AFF3-215ENST00000498090 DPY19L2P1Q6NXN4 242 aa13.53□□□□□ -0.24
AFF3-215ENST00000498090 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.53□□□□□ -0.24
AFF3-215ENST00000498090 SRLQ86TD4 932 aa13.53□□□□□ -0.24
AFF3-215ENST00000498090 SAMD3Q8N6K7 520 aa13.53□□□□□ -0.24
AFF3-215ENST00000498090 IL31RAQ8NI17 732 aa13.53□□□□□ -0.24
AFF3-215ENST00000498090 ACTRT1Q8TDG2 376 aa13.53□□□□□ -0.24
AFF3-215ENST00000498090 GJA10Q969M2 543 aa13.53□□□□□ -0.24
AFF3-215ENST00000498090 INPP4AQ96PE3 977 aaPredicted RBP13.53□□□□□ -0.24
AFF3-215ENST00000498090 TAAR1Q96RJ0 339 aa13.53□□□□□ -0.24
AFF3-215ENST00000498090 EFCC1Q9HA90 598 aa13.53□□□□□ -0.24
AFF3-215ENST00000498090 FAM86B1E9PN63 330 aa13.52□□□□□ -0.25
AFF3-215ENST00000498090 NCK2O43639 380 aa13.52□□□□□ -0.25
AFF3-215ENST00000498090 FAM86B2P0C5J1 330 aa13.52□□□□□ -0.25
AFF3-215ENST00000498090 BCRP11274 1271 aa13.52□□□□□ -0.25
AFF3-215ENST00000498090 CXCR5P32302 372 aa13.52□□□□□ -0.25
AFF3-215ENST00000498090 PSMC2P35998 433 aaKnown RBP13.52□□□□□ -0.25
AFF3-215ENST00000498090 MAP2K2P36507 400 aa13.52□□□□□ -0.25
AFF3-215ENST00000498090 MATR3P43243 847 aaKnown RBP eCLIP13.52□□□□□ -0.25
AFF3-215ENST00000498090 PTK2Q05397 1052 aa13.52□□□□□ -0.25
AFF3-215ENST00000498090 NOGQ13253 232 aa13.52□□□□□ -0.25
AFF3-215ENST00000498090 CLUL1Q15846 466 aa13.52□□□□□ -0.25
AFF3-215ENST00000498090 LRRC31Q6UY01 552 aa13.52□□□□□ -0.25
AFF3-215ENST00000498090 CD302Q8IX05 232 aa13.52□□□□□ -0.25
AFF3-215ENST00000498090 SHCBP1Q8NEM2 672 aa13.52□□□□□ -0.25
AFF3-215ENST00000498090 GPRC5AQ8NFJ5 357 aa13.52□□□□□ -0.25
AFF3-215ENST00000498090 HDAC7Q8WUI4 952 aa13.52□□□□□ -0.25
AFF3-215ENST00000498090 VTI1AQ96AJ9 217 aa13.52□□□□□ -0.25
AFF3-215ENST00000498090 EIF2AK1Q9BQI3 630 aaKnown RBP13.52□□□□□ -0.25
AFF3-215ENST00000498090 WBP1LQ9NX94 342 aa13.52□□□□□ -0.25
AFF3-215ENST00000498090 MAP3K20Q9NYL2 800 aaKnown RBP13.52□□□□□ -0.25
AFF3-215ENST00000498090 FBXO40Q9UH90 709 aa13.52□□□□□ -0.25
AFF3-215ENST00000498090 CPA4Q9UI42 421 aa13.52□□□□□ -0.25
AFF3-215ENST00000498090 NAGPAQ9UK23 515 aa13.52□□□□□ -0.25
AFF3-215ENST00000498090 TMEM59LQ9UK28 342 aa13.52□□□□□ -0.25
AFF3-215ENST00000498090 ASTN1O14525 1302 aa13.51□□□□□ -0.25
AFF3-215ENST00000498090 MYH7BA7E2Y1 1941 aa13.51□□□□□ -0.25
AFF3-215ENST00000498090 CCDC188H7C350 402 aa13.51□□□□□ -0.25
AFF3-215ENST00000498090 RFX1P22670 979 aa13.51□□□□□ -0.25
AFF3-215ENST00000498090 COPB2P35606 906 aa13.51□□□□□ -0.25
AFF3-215ENST00000498090 CASP5P51878 434 aa13.51□□□□□ -0.25
AFF3-215ENST00000498090 JAM2P57087 298 aa13.51□□□□□ -0.25
AFF3-215ENST00000498090 PPP2R5CQ13362 524 aa13.51□□□□□ -0.25
AFF3-215ENST00000498090 CUL1Q13616 776 aa13.51□□□□□ -0.25
AFF3-215ENST00000498090 MYBPC2Q14324 1141 aa13.51□□□□□ -0.25
AFF3-215ENST00000498090 FAM110CQ1W6H9 321 aa13.51□□□□□ -0.25
AFF3-215ENST00000498090 GSPT2Q8IYD1 628 aaKnown RBP13.51□□□□□ -0.25
AFF3-215ENST00000498090 USP38Q8NB14 1042 aa13.51□□□□□ -0.25
AFF3-215ENST00000498090 HSD17B14Q9BPX1 270 aa13.51□□□□□ -0.25
AFF3-215ENST00000498090 ODF2LQ9ULJ1 636 aa13.51□□□□□ -0.25
AFF3-215ENST00000498090 NENFQ9UMX5 172 aa13.51□□□□□ -0.25
AFF3-215ENST00000498090 DIS3Q9Y2L1 958 aaKnown RBP13.51□□□□□ -0.25
AFF3-215ENST00000498090 AKAP3O75969 853 aa13.5□□□□□ -0.25
AFF3-215ENST00000498090 FAM13AO94988 1023 aa13.5□□□□□ -0.25
AFF3-215ENST00000498090 HEXIM1O94992 359 aaKnown RBP13.5□□□□□ -0.25
AFF3-215ENST00000498090 KIF4AO95239 1232 aa13.5□□□□□ -0.25
AFF3-215ENST00000498090 GCNT3O95395 438 aa13.5□□□□□ -0.25
AFF3-215ENST00000498090 EIF2AK2P19525 551 aaKnown RBP13.5□□□□□ -0.25
AFF3-215ENST00000498090 HOXD13P35453 343 aa13.5□□□□□ -0.25
AFF3-215ENST00000498090 STAT1P42224 750 aa13.5□□□□□ -0.25
AFF3-215ENST00000498090 PSMC6P62333 389 aa13.5□□□□□ -0.25
AFF3-215ENST00000498090 SKOR1P84550 965 aa13.5□□□□□ -0.25
AFF3-215ENST00000498090 CNTN2Q02246 1040 aa13.5□□□□□ -0.25
AFF3-215ENST00000498090 CRHR2Q13324 411 aa13.5□□□□□ -0.25
AFF3-215ENST00000498090 PPP2R5AQ15172 486 aa13.5□□□□□ -0.25
AFF3-215ENST00000498090 EMC10Q5UCC4 262 aa13.5□□□□□ -0.25
AFF3-215ENST00000498090 ALKBH5Q6P6C2 394 aaKnown RBP13.5□□□□□ -0.25
AFF3-215ENST00000498090 ZNF571Q7Z3V5 609 aaPredicted RBP13.5□□□□□ -0.25
AFF3-215ENST00000498090 SLC35C1Q96A29 364 aa13.5□□□□□ -0.25
AFF3-215ENST00000498090 ZFP91Q96JP5 570 aaPredicted RBP13.5□□□□□ -0.25
AFF3-215ENST00000498090 PSMB7Q99436 277 aa13.5□□□□□ -0.25
AFF3-215ENST00000498090 WDR11Q9BZH6 1224 aa13.5□□□□□ -0.25
AFF3-215ENST00000498090 BHMT2Q9H2M3 363 aa13.5□□□□□ -0.25
AFF3-215ENST00000498090 PXMP2Q9NR77 195 aa13.5□□□□□ -0.25
AFF3-215ENST00000498090 RRP15Q9Y3B9 282 aaKnown RBP13.5□□□□□ -0.25
AFF3-215ENST00000498090 FTCDO95954 541 aa13.5□□□□□ -0.25
AFF3-215ENST00000498090 H2AFZP0C0S5 128 aa13.5□□□□□ -0.25
AFF3-215ENST00000498090 HSPA1AP0DMV8 641 aaKnown RBP13.5□□□□□ -0.25
AFF3-215ENST00000498090 HSPA1BP0DMV9 641 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms