RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 RRN3Q9NYV6 651 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 DOLKQ9UPQ8 538 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 TAF6LQ9Y6J9 622 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 SHPRHQ149N8 1683 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 RASA4BC9J798 803 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 RASA4O43374 803 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 FKBP6O75344 327 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 TPPPO94811 219 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 PGM3O95394 542 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 AFPP02771 609 aaKnown RBP8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 BMP6P22004 513 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 CA4P22748 312 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 SLC1A4P43007 532 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 MXI1P50539 228 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 CHN2P52757 468 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 ATP1A4Q13733 1029 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 CNGA2Q16280 664 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 MEA1Q16626 185 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 TRMT5Q32P41 509 aaKnown RBP8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 DNAL1Q4LDG9 190 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 CLEC4GQ6UXB4 293 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 NACAP1Q9BZK3 213 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 KIAA1683Q9H0B3 1180 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 NAPBQ9H115 298 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 DENND2DQ9H6A0 471 aaPredicted RBP8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 SAR1AQ9NR31 198 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 ZBTB21Q9ULJ3 1066 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 SSX2IPQ9Y2D8 614 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 MAP3K2Q9Y2U5 619 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 MAST1Q9Y2H9 1570 aa8.73□□□□□ -1.01
CRNKL1-205ENST00000496549 RNF17Q9BXT8 1623 aaKnown RBP8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 MED23Q9ULK4 1368 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 A0A1W2PQJ5 194 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 SSU72P8A0A1W2PR75 194 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 GRM8O00222 908 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 CEP152O94986 1710 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 H2AFZP0C0S5 128 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 HSPD1P10809 573 aaKnown RBP8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 KRT5P13647 590 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 FUT4P22083 530 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 TKTP29401 623 aaKnown RBP8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 CASP1P29466 404 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 TUBA3CQ13748 450 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 DHX34Q14147 1143 aaKnown RBP8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 TMED2Q15363 201 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 TRIP10Q15642 601 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 ANKRD20A4Q4UJ75 823 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 TTC38Q5R3I4 469 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 ACAD11Q709F0 780 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 H2AFVQ71UI9 128 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 SUPT20HQ8NEM7 779 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 LRGUKQ96M69 825 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 RILPQ96NA2 401 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 SLC39A3Q9BRY0 314 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 BTBD10Q9BSF8 475 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 DCTN4Q9UJW0 460 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 USP20Q9Y2K6 914 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 DIS3Q9Y2L1 958 aaKnown RBP8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 AK5Q9Y6K8 562 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 PDS5AQ29RF7 1337 aaKnown RBP8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 LRRC7Q96NW7 1537 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 FAM237AA0A1B0GTK4 181 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 ATP9BO43861 1147 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 TRMUO75648 421 aaKnown RBP8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 GFAPP14136 432 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 CPA3P15088 417 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 C21orf59P57076 290 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 PTPAQ15257 358 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 MTFR1Q15390 333 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 RABGAP1LQ5R372 815 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 LMBRD2Q68DH5 695 aaPredicted RBP8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 TMC5Q6UXY8 1006 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 BARGINQ6ZT62 677 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 MIGA2Q7L4E1 593 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 KSR1Q8IVT5 923 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 CATSPER1Q8NEC5 780 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 FNDC8Q8TC99 324 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 SLC26A7Q8TE54 656 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 ITPKCQ96DU7 683 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 CALML4Q96GE6 196 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 AIFM3Q96NN9 605 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 HOMER2Q9NSB8 354 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 FAIMQ9NVQ4 179 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 IVNS1ABPQ9Y6Y0 642 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 IQGAP1P46940 1657 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 LRRC10BA6NIK2 292 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 LRRC53A6NM62 1247 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 PPP1R3GB7ZBB8 358 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 DDHD2O94830 711 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 PABPC4LP0CB38 370 aaKnown RBP8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 GSTT2P0CG29 244 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 GSTT2BP0CG30 244 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 MYCLP1P12525 358 aaPredicted RBP8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 CCNB1P14635 433 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 MCM7P33993 719 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 RAP1GDS1P52306 607 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 ARFIP2P53365 341 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 MAN2A1Q16706 1144 aa8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 TAF1BQ53T94 588 aaPredicted RBP8.72□□□□□ -1.01
CRNKL1-205ENST00000496549 NELFCDQ8IXH7 590 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms