RNA–Protein interactions for RNA: ENST00000496172.5

ERGIC3-219, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-219ENST00000496172 SMRP1Q8NCR6 262 aa11.7□□□□□ -0.54
ERGIC3-219ENST00000496172 PSPC1Q8WXF1 523 aaKnown RBP11.7□□□□□ -0.54
ERGIC3-219ENST00000496172 ATOH1Q92858 354 aaPredicted RBP11.7□□□□□ -0.54
ERGIC3-219ENST00000496172 NLRP4Q96MN2 994 aa11.7□□□□□ -0.54
ERGIC3-219ENST00000496172 MTMR9Q96QG7 549 aa11.7□□□□□ -0.54
ERGIC3-219ENST00000496172 CEP89Q96ST8 783 aa11.7□□□□□ -0.54
ERGIC3-219ENST00000496172 EIF2AK1Q9BQI3 630 aaKnown RBP11.7□□□□□ -0.54
ERGIC3-219ENST00000496172 ELAC1Q9H777 363 aaKnown RBP11.7□□□□□ -0.54
ERGIC3-219ENST00000496172 CHST12Q9NRB3 414 aa11.7□□□□□ -0.54
ERGIC3-219ENST00000496172 TMEM161AQ9NX61 479 aa11.7□□□□□ -0.54
ERGIC3-219ENST00000496172 DACT1Q9NYF0 836 aa11.7□□□□□ -0.54
ERGIC3-219ENST00000496172 MRPL42Q9Y6G3 142 aaKnown RBP11.7□□□□□ -0.54
ERGIC3-219ENST00000496172 TTC3P53804 2025 aa11.7□□□□□ -0.54
ERGIC3-219ENST00000496172 LOXHD1Q8IVV2 1947 aa11.7□□□□□ -0.54
ERGIC3-219ENST00000496172 A0A087WZ62 844 aa11.69□□□□□ -0.54
ERGIC3-219ENST00000496172 PRR23AA6NEV1 266 aa11.69□□□□□ -0.54
ERGIC3-219ENST00000496172 TBKBP1A7MCY6 615 aa11.69□□□□□ -0.54
ERGIC3-219ENST00000496172 ASAP2O43150 1006 aa11.69□□□□□ -0.54
ERGIC3-219ENST00000496172 AVPR2P30518 371 aa11.69□□□□□ -0.54
ERGIC3-219ENST00000496172 NBL1P41271 181 aa11.69□□□□□ -0.54
ERGIC3-219ENST00000496172 TRAPPC10P48553 1259 aa11.69□□□□□ -0.54
ERGIC3-219ENST00000496172 COASYQ13057 564 aa11.69□□□□□ -0.54
ERGIC3-219ENST00000496172 DSC3Q14574 896 aa11.69□□□□□ -0.54
ERGIC3-219ENST00000496172 ZNF174Q15697 407 aa11.69□□□□□ -0.54
ERGIC3-219ENST00000496172 CLUL1Q15846 466 aa11.69□□□□□ -0.54
ERGIC3-219ENST00000496172 TTC38Q5R3I4 469 aa11.69□□□□□ -0.54
ERGIC3-219ENST00000496172 NOSTRINQ8IVI9 506 aa11.69□□□□□ -0.54
ERGIC3-219ENST00000496172 ERMNQ8TAM6 284 aa11.69□□□□□ -0.54
ERGIC3-219ENST00000496172 HSD17B14Q9BPX1 270 aa11.69□□□□□ -0.54
ERGIC3-219ENST00000496172 FDXACB1Q9BRP7 624 aaPredicted RBP11.69□□□□□ -0.54
ERGIC3-219ENST00000496172 DHX33Q9H6R0 707 aaKnown RBP11.69□□□□□ -0.54
ERGIC3-219ENST00000496172 ANKEF1Q9NU02 776 aa11.69□□□□□ -0.54
ERGIC3-219ENST00000496172 WRAP73Q9P2S5 460 aaPredicted RBP11.69□□□□□ -0.54
ERGIC3-219ENST00000496172 PCDHB12Q9Y5F1 795 aa11.69□□□□□ -0.54
ERGIC3-219ENST00000496172 COL4A3BPQ9Y5P4 624 aa11.69□□□□□ -0.54
ERGIC3-219ENST00000496172 KMT2BQ9UMN6 2715 aaPredicted RBP11.69□□□□□ -0.54
ERGIC3-219ENST00000496172 LYPLA2O95372 231 aa11.68□□□□□ -0.54
ERGIC3-219ENST00000496172 EOMESO95936 686 aa11.68□□□□□ -0.54
ERGIC3-219ENST00000496172 OR52Z1P0C646 297 aa11.68□□□□□ -0.54
ERGIC3-219ENST00000496172 SRGAP2CP0DJJ0 459 aa11.68□□□□□ -0.54
ERGIC3-219ENST00000496172 SKIP12755 728 aa11.68□□□□□ -0.54
ERGIC3-219ENST00000496172 FGFR4P22455 802 aa11.68□□□□□ -0.54
ERGIC3-219ENST00000496172 GATMP50440 423 aa11.68□□□□□ -0.54
ERGIC3-219ENST00000496172 ADAM15Q13444 863 aa11.68□□□□□ -0.54
ERGIC3-219ENST00000496172 EMC2Q15006 297 aa11.68□□□□□ -0.54
ERGIC3-219ENST00000496172 FAM102BQ5T8I3 360 aa11.68□□□□□ -0.54
ERGIC3-219ENST00000496172 ASCL5Q7RTU5 278 aa11.68□□□□□ -0.54
ERGIC3-219ENST00000496172 ZNF579Q8NAF0 562 aaKnown RBP11.68□□□□□ -0.54
ERGIC3-219ENST00000496172 RNF169Q8NCN4 708 aa11.68□□□□□ -0.54
ERGIC3-219ENST00000496172 PRPF31Q8WWY3 499 aaKnown RBP11.68□□□□□ -0.54
ERGIC3-219ENST00000496172 P2RX5Q93086 422 aa11.68□□□□□ -0.54
ERGIC3-219ENST00000496172 TMEM143Q96AN5 459 aa11.68□□□□□ -0.54
ERGIC3-219ENST00000496172 MTRQ99707 1265 aa11.68□□□□□ -0.54
ERGIC3-219ENST00000496172 KIAA1671Q9BY89 1806 aa11.67□□□□□ -0.54
ERGIC3-219ENST00000496172 A0A0U1RQF3 1178 aa11.67□□□□□ -0.54
ERGIC3-219ENST00000496172 WNT7AO00755 349 aa11.67□□□□□ -0.54
ERGIC3-219ENST00000496172 GRM6O15303 877 aa11.67□□□□□ -0.54
ERGIC3-219ENST00000496172 GALR2O43603 387 aaPredicted RBP11.67□□□□□ -0.54
ERGIC3-219ENST00000496172 CSDE1O75534 798 aaKnown RBP11.67□□□□□ -0.54
ERGIC3-219ENST00000496172 DGAT1O75907 488 aa11.67□□□□□ -0.54
ERGIC3-219ENST00000496172 FGFR1P11362 822 aa11.67□□□□□ -0.54
ERGIC3-219ENST00000496172 XRCC6P12956 609 aaKnown RBP eCLIP11.67□□□□□ -0.54
ERGIC3-219ENST00000496172 TECP42680 631 aa11.67□□□□□ -0.54
ERGIC3-219ENST00000496172 LAMTOR4Q0VGL1 99 aa11.67□□□□□ -0.54
ERGIC3-219ENST00000496172 TFDP1Q14186 410 aa11.67□□□□□ -0.54
ERGIC3-219ENST00000496172 MXD4Q14582 209 aaPredicted RBP11.67□□□□□ -0.54
ERGIC3-219ENST00000496172 TWF2Q6IBS0 349 aaKnown RBP11.67□□□□□ -0.54
ERGIC3-219ENST00000496172 CATSPER4Q7RTX7 472 aa11.67□□□□□ -0.54
ERGIC3-219ENST00000496172 SRGAP1Q7Z6B7 1085 aa11.67□□□□□ -0.54
ERGIC3-219ENST00000496172 ECHDC2Q86YB7 292 aa11.67□□□□□ -0.54
ERGIC3-219ENST00000496172 KSR1Q8IVT5 923 aa11.67□□□□□ -0.54
ERGIC3-219ENST00000496172 PPP2R3CQ969Q6 453 aa11.67□□□□□ -0.54
ERGIC3-219ENST00000496172 TMX3Q96JJ7 454 aa11.67□□□□□ -0.54
ERGIC3-219ENST00000496172 TBC1D32Q96NH3 1257 aa11.67□□□□□ -0.54
ERGIC3-219ENST00000496172 TMEM117Q9H0C3 514 aa11.67□□□□□ -0.54
ERGIC3-219ENST00000496172 TMEM60Q9H2L4 133 aa11.67□□□□□ -0.54
ERGIC3-219ENST00000496172 TUFT1Q9NNX1 390 aa11.67□□□□□ -0.54
ERGIC3-219ENST00000496172 BMP2KQ9NSY1 1161 aaPredicted RBP11.67□□□□□ -0.54
ERGIC3-219ENST00000496172 PLAGL2Q9UPG8 496 aa11.67□□□□□ -0.54
ERGIC3-219ENST00000496172 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.67□□□□□ -0.54
ERGIC3-219ENST00000496172 DMXL1Q9Y485 3027 aa11.67□□□□□ -0.54
ERGIC3-219ENST00000496172 WDR87Q6ZQQ6 2873 aa11.66□□□□□ -0.54
ERGIC3-219ENST00000496172 POTEMA6NI47 508 aa11.66□□□□□ -0.54
ERGIC3-219ENST00000496172 H3BQV1 296 aa11.66□□□□□ -0.54
ERGIC3-219ENST00000496172 ZBTB39O15060 712 aa11.66□□□□□ -0.54
ERGIC3-219ENST00000496172 LINC01565O15544 149 aa11.66□□□□□ -0.54
ERGIC3-219ENST00000496172 LAG3P18627 525 aa11.66□□□□□ -0.54
ERGIC3-219ENST00000496172 U2AF2P26368 475 aaKnown RBP eCLIP11.66□□□□□ -0.547e-6■■□□□ 14.4
ERGIC3-219ENST00000496172 PHKA2P46019 1235 aa11.66□□□□□ -0.54
ERGIC3-219ENST00000496172 ID4P47928 161 aa11.66□□□□□ -0.54
ERGIC3-219ENST00000496172 NDUFV1P49821 464 aa11.66□□□□□ -0.54
ERGIC3-219ENST00000496172 NCBP1Q09161 790 aaKnown RBP11.66□□□□□ -0.54
ERGIC3-219ENST00000496172 HAUS3Q68CZ6 603 aa11.66□□□□□ -0.54
ERGIC3-219ENST00000496172 MCTP1Q6DN14 999 aa11.66□□□□□ -0.54
ERGIC3-219ENST00000496172 FERMT3Q86UX7 667 aa11.66□□□□□ -0.54
ERGIC3-219ENST00000496172 EFHBQ8N7U6 833 aa11.66□□□□□ -0.54
ERGIC3-219ENST00000496172 KLHL23Q8NBE8 558 aa11.66□□□□□ -0.54
ERGIC3-219ENST00000496172 RSPH1Q8WYR4 309 aa11.66□□□□□ -0.54
ERGIC3-219ENST00000496172 NACC1Q96RE7 527 aa11.66□□□□□ -0.54
ERGIC3-219ENST00000496172 POLR3CQ9BUI4 534 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms