RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899		A0A0U1RQF3	1178 aa		13.73	□□□□□ -0.21
MRPL55-233	ENST00000495899	USO1	O60763	962 aa	Known RBP	13.73	□□□□□ -0.21
MRPL55-233	ENST00000495899	CSDE1	O75534	798 aa	Known RBP	13.73	□□□□□ -0.21
MRPL55-233	ENST00000495899	EOMES	O95936	686 aa		13.73	□□□□□ -0.21
MRPL55-233	ENST00000495899	SKI	P12755	728 aa		13.73	□□□□□ -0.21
MRPL55-233	ENST00000495899	LONP1	P36776	959 aa	Known RBP	13.73	□□□□□ -0.21
MRPL55-233	ENST00000495899	PTEN	P60484	403 aa		13.73	□□□□□ -0.21
MRPL55-233	ENST00000495899	HYI	Q5T013	277 aa		13.73	□□□□□ -0.21
MRPL55-233	ENST00000495899	CATSPER4	Q7RTX7	472 aa		13.73	□□□□□ -0.21
MRPL55-233	ENST00000495899	CMTR2	Q8IYT2	770 aa	Known RBP	13.73	□□□□□ -0.21
MRPL55-233	ENST00000495899	ARNTL2	Q8WYA1	636 aa		13.73	□□□□□ -0.21
MRPL55-233	ENST00000495899	MMTAG2	Q9BU76	263 aa	Known RBP	13.73	□□□□□ -0.21
MRPL55-233	ENST00000495899	NT5C3A	Q9H0P0	336 aa		13.73	□□□□□ -0.21
MRPL55-233	ENST00000495899	RWDD3	Q9Y3V2	267 aa		13.73	□□□□□ -0.21
MRPL55-233	ENST00000495899	SI	P14410	1827 aa		13.73	□□□□□ -0.21
MRPL55-233	ENST00000495899	WDR81	Q562E7	1941 aa		13.72	□□□□□ -0.21
MRPL55-233	ENST00000495899	PP2D1	A8MPX8	630 aa		13.72	□□□□□ -0.21
MRPL55-233	ENST00000495899	HOXA2	O43364	376 aa		13.72	□□□□□ -0.21
MRPL55-233	ENST00000495899	EYA4	O95677	639 aa		13.72	□□□□□ -0.21
MRPL55-233	ENST00000495899	FGFR4	P22455	802 aa		13.72	□□□□□ -0.21
MRPL55-233	ENST00000495899	GLRA2	P23416	452 aa		13.72	□□□□□ -0.21
MRPL55-233	ENST00000495899	CDC25A	P30304	524 aa		13.72	□□□□□ -0.21
MRPL55-233	ENST00000495899	NCBP1	Q09161	790 aa	Known RBP	13.72	□□□□□ -0.21
MRPL55-233	ENST00000495899	BTG3	Q14201	252 aa	Predicted RBP	13.72	□□□□□ -0.21
MRPL55-233	ENST00000495899	ADGRE1	Q14246	886 aa		13.72	□□□□□ -0.21
MRPL55-233	ENST00000495899	RSPH1	Q8WYR4	309 aa		13.72	□□□□□ -0.21
MRPL55-233	ENST00000495899	CLP1	Q92989	425 aa	Known RBP	13.72	□□□□□ -0.21
MRPL55-233	ENST00000495899	BHMT2	Q9H2M3	363 aa		13.72	□□□□□ -0.21
MRPL55-233	ENST00000495899	CERS4	Q9HA82	394 aa		13.72	□□□□□ -0.21
MRPL55-233	ENST00000495899	LMCD1	Q9NZU5	365 aa		13.72	□□□□□ -0.21
MRPL55-233	ENST00000495899	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.72	□□□□□ -0.21
MRPL55-233	ENST00000495899	MICAL3	Q7RTP6	2002 aa		13.71	□□□□□ -0.21
MRPL55-233	ENST00000495899	C5orf67	F2Z3F1	127 aa		13.71	□□□□□ -0.21
MRPL55-233	ENST00000495899	ZNF623	O75123	536 aa		13.71	□□□□□ -0.21
MRPL55-233	ENST00000495899	RB1	P06400	928 aa		13.71	□□□□□ -0.21
MRPL55-233	ENST00000495899	AXL	P30530	894 aa		13.71	□□□□□ -0.21
MRPL55-233	ENST00000495899	UBA7	P41226	1012 aa		13.71	□□□□□ -0.21
MRPL55-233	ENST00000495899	CAPS	Q13938	189 aa		13.71	□□□□□ -0.21
MRPL55-233	ENST00000495899	PTPA	Q15257	358 aa		13.71	□□□□□ -0.21
MRPL55-233	ENST00000495899	EPC2	Q52LR7	807 aa		13.71	□□□□□ -0.21
MRPL55-233	ENST00000495899	FAM102B	Q5T8I3	360 aa		13.71	□□□□□ -0.21
MRPL55-233	ENST00000495899	ECHDC2	Q86YB7	292 aa		13.71	□□□□□ -0.21
MRPL55-233	ENST00000495899	TMEM192	Q8IY95	271 aa		13.71	□□□□□ -0.21
MRPL55-233	ENST00000495899	MAFA	Q8NHW3	353 aa	Predicted RBP	13.71	□□□□□ -0.21
MRPL55-233	ENST00000495899	ASAP3	Q8TDY4	903 aa		13.71	□□□□□ -0.21
MRPL55-233	ENST00000495899	PTCD2	Q8WV60	388 aa	Known RBP	13.71	□□□□□ -0.21
MRPL55-233	ENST00000495899	KIFAP3	Q92845	792 aa		13.71	□□□□□ -0.21
MRPL55-233	ENST00000495899	C17orf80	Q9BSJ5	609 aa		13.71	□□□□□ -0.21
MRPL55-233	ENST00000495899	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.71	□□□□□ -0.21
MRPL55-233	ENST00000495899	MINDY3	Q9H8M7	445 aa		13.71	□□□□□ -0.21
MRPL55-233	ENST00000495899	AGPAT5	Q9NUQ2	364 aa		13.71	□□□□□ -0.21
MRPL55-233	ENST00000495899	PIN4	Q9Y237	131 aa	Known RBP	13.71	□□□□□ -0.21
MRPL55-233	ENST00000495899	CLIC4	Q9Y696	253 aa		13.71	□□□□□ -0.21
MRPL55-233	ENST00000495899	EVPL	Q92817	2033 aa		13.71	□□□□□ -0.22
MRPL55-233	ENST00000495899	EPOP	A6NHQ4	379 aa		13.7	□□□□□ -0.22
MRPL55-233	ENST00000495899		E9PMD0	336 aa		13.7	□□□□□ -0.22
MRPL55-233	ENST00000495899	LINC00271	P0C7V0	271 aa		13.7	□□□□□ -0.22
MRPL55-233	ENST00000495899	IGFBP4	P22692	258 aa		13.7	□□□□□ -0.22
MRPL55-233	ENST00000495899	HOXA11	P31270	313 aa	Predicted RBP	13.7	□□□□□ -0.22
MRPL55-233	ENST00000495899	BMPR1A	P36894	532 aa		13.7	□□□□□ -0.22
MRPL55-233	ENST00000495899	RAB27A	P51159	221 aa		13.7	□□□□□ -0.22
MRPL55-233	ENST00000495899	GRB10	Q13322	594 aa		13.7	□□□□□ -0.22
MRPL55-233	ENST00000495899	PPP2R5A	Q15172	486 aa		13.7	□□□□□ -0.22
MRPL55-233	ENST00000495899	SMYD5	Q6GMV2	418 aa		13.7	□□□□□ -0.22
MRPL55-233	ENST00000495899	TWF2	Q6IBS0	349 aa	Known RBP	13.7	□□□□□ -0.22
MRPL55-233	ENST00000495899	CABP7	Q86V35	215 aa		13.7	□□□□□ -0.22
MRPL55-233	ENST00000495899	CDK5RAP3	Q96JB5	506 aa		13.7	□□□□□ -0.22
MRPL55-233	ENST00000495899	TIPIN	Q9BVW5	301 aa		13.7	□□□□□ -0.22
MRPL55-233	ENST00000495899	PLVAP	Q9BX97	442 aa		13.7	□□□□□ -0.22
MRPL55-233	ENST00000495899	GPRC5C	Q9NQ84	441 aa		13.7	□□□□□ -0.22
MRPL55-233	ENST00000495899	KCND2	Q9NZV8	630 aa		13.7	□□□□□ -0.22
MRPL55-233	ENST00000495899	SRPRB	Q9Y5M8	271 aa	Known RBP	13.7	□□□□□ -0.22
MRPL55-233	ENST00000495899	TRANK1	O15050	2925 aa		13.7	□□□□□ -0.22
MRPL55-233	ENST00000495899	PTPRS	Q13332	1948 aa		13.69	□□□□□ -0.22
MRPL55-233	ENST00000495899		H3BNC9	293 aa		13.69	□□□□□ -0.22
MRPL55-233	ENST00000495899	INO80B-WBP1	J3KQ70	363 aa		13.69	□□□□□ -0.22
MRPL55-233	ENST00000495899	RFXAP	O00287	272 aa		13.69	□□□□□ -0.22
MRPL55-233	ENST00000495899	LPXN	O60711	386 aa		13.69	□□□□□ -0.22
MRPL55-233	ENST00000495899	ERLIN2	O94905	339 aa		13.69	□□□□□ -0.22
MRPL55-233	ENST00000495899	NAMPT	P43490	491 aa		13.69	□□□□□ -0.22
MRPL55-233	ENST00000495899	MBTD1	Q05BQ5	628 aa		13.69	□□□□□ -0.22
MRPL55-233	ENST00000495899	SLC39A14	Q15043	492 aa		13.69	□□□□□ -0.22
MRPL55-233	ENST00000495899	TMEM119	Q4V9L6	283 aa		13.69	□□□□□ -0.22
MRPL55-233	ENST00000495899	NAALADL2	Q58DX5	795 aa		13.69	□□□□□ -0.22
MRPL55-233	ENST00000495899	FAM173B	Q6P4H8	233 aa		13.69	□□□□□ -0.22
MRPL55-233	ENST00000495899	MAEA	Q7L5Y9	396 aa		13.69	□□□□□ -0.22
MRPL55-233	ENST00000495899	SPRED2	Q7Z698	418 aa		13.69	□□□□□ -0.22
MRPL55-233	ENST00000495899	ZNF598	Q86UK7	904 aa	Known RBP	13.69	□□□□□ -0.22
MRPL55-233	ENST00000495899	SYT2	Q8N9I0	419 aa	Predicted RBP	13.69	□□□□□ -0.22
MRPL55-233	ENST00000495899	CCDC51	Q96ER9	411 aa		13.69	□□□□□ -0.22
MRPL55-233	ENST00000495899	CALML4	Q96GE6	196 aa		13.69	□□□□□ -0.22
MRPL55-233	ENST00000495899	IFT74	Q96LB3	600 aa		13.69	□□□□□ -0.22
MRPL55-233	ENST00000495899	ZNF396	Q96N95	335 aa	Predicted RBP	13.69	□□□□□ -0.22
MRPL55-233	ENST00000495899	PNMA5	Q96PV4	448 aa		13.69	□□□□□ -0.22
MRPL55-233	ENST00000495899	TMEM117	Q9H0C3	514 aa		13.69	□□□□□ -0.22
MRPL55-233	ENST00000495899	C2orf40	Q9H1Z8	148 aa		13.69	□□□□□ -0.22
MRPL55-233	ENST00000495899	C17orf75	Q9HAS0	396 aa		13.69	□□□□□ -0.22
MRPL55-233	ENST00000495899	KCNG1	Q9UIX4	513 aa		13.69	□□□□□ -0.22
MRPL55-233	ENST00000495899	MTUS1	Q9ULD2	1270 aa		13.69	□□□□□ -0.22
MRPL55-233	ENST00000495899	MTCH2	Q9Y6C9	303 aa		13.69	□□□□□ -0.22

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