RNA–Protein interactions for RNA: ENST00000495546.1

C2orf88-209, Transcript of chromosome 2 open reading frame 88, humanhuman

TSL 4

Gene C2orf88, Length 387 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-209ENST00000495546 ARHGAP28Q9P2N2 729 aa17.06■□□□□ 0.32
C2orf88-209ENST00000495546 LAMA2P24043 3122 aaKnown RBP17.05■□□□□ 0.32
C2orf88-209ENST00000495546 LRRIQ4A6NIV6 560 aa17.05■□□□□ 0.32
C2orf88-209ENST00000495546 SFI1A8K8P3 1242 aa17.05■□□□□ 0.32
C2orf88-209ENST00000495546 ACTN4O43707 911 aaKnown RBP17.05■□□□□ 0.32
C2orf88-209ENST00000495546 PLS3P13797 630 aa17.05■□□□□ 0.32
C2orf88-209ENST00000495546 HOXA11P31270 313 aaPredicted RBP17.05■□□□□ 0.32
C2orf88-209ENST00000495546 NDUFA8P51970 172 aa17.05■□□□□ 0.32
C2orf88-209ENST00000495546 FAM187BQ17R55 369 aa17.05■□□□□ 0.32
C2orf88-209ENST00000495546 FAM109BQ6ICB4 259 aaPredicted RBP17.05■□□□□ 0.32
C2orf88-209ENST00000495546 CNNM4Q6P4Q7 775 aa17.05■□□□□ 0.32
C2orf88-209ENST00000495546 PPP4R3CPQ6ZMV5 832 aa17.05■□□□□ 0.32
C2orf88-209ENST00000495546 SPIRE2Q8WWL2 714 aa17.05■□□□□ 0.32
C2orf88-209ENST00000495546 MRPS27Q92552 414 aaKnown RBP17.05■□□□□ 0.32
C2orf88-209ENST00000495546 DDX12PQ92771 950 aa17.05■□□□□ 0.32
C2orf88-209ENST00000495546 C2orf40Q9H1Z8 148 aa17.05■□□□□ 0.32
C2orf88-209ENST00000495546 FZD8Q9H461 694 aa17.05■□□□□ 0.32
C2orf88-209ENST00000495546 MAGEF1Q9HAY2 307 aa17.05■□□□□ 0.32
C2orf88-209ENST00000495546 CHST12Q9NRB3 414 aa17.05■□□□□ 0.32
C2orf88-209ENST00000495546 RGS18Q9NS28 235 aa17.05■□□□□ 0.32
C2orf88-209ENST00000495546 AGPAT5Q9NUQ2 364 aa17.05■□□□□ 0.32
C2orf88-209ENST00000495546 PTPRSQ13332 1948 aa17.05■□□□□ 0.32
C2orf88-209ENST00000495546 FRMD3A2A2Y4 597 aa17.04■□□□□ 0.32
C2orf88-209ENST00000495546 INO80B-WBP1J3KQ70 363 aa17.04■□□□□ 0.32
C2orf88-209ENST00000495546 TSPAN1O60635 241 aa17.04■□□□□ 0.32
C2orf88-209ENST00000495546 SLFN14P0C7P3 912 aa17.04■□□□□ 0.32
C2orf88-209ENST00000495546 ATP2A2P16615 1042 aaKnown RBP17.04■□□□□ 0.32
C2orf88-209ENST00000495546 KCNJ6P48051 423 aa17.04■□□□□ 0.32
C2orf88-209ENST00000495546 PEX3P56589 373 aa17.04■□□□□ 0.32
C2orf88-209ENST00000495546 DMP1Q13316 513 aaPredicted RBP17.04■□□□□ 0.32
C2orf88-209ENST00000495546 HABP4Q5JVS0 413 aaKnown RBP17.04■□□□□ 0.32
C2orf88-209ENST00000495546 CATSPER4Q7RTX7 472 aa17.04■□□□□ 0.32
C2orf88-209ENST00000495546 FSIP1Q8NA03 581 aa17.04■□□□□ 0.32
C2orf88-209ENST00000495546 TOP1MTQ969P6 601 aa17.04■□□□□ 0.32
C2orf88-209ENST00000495546 FIZ1Q96SL8 496 aa17.04■□□□□ 0.32
C2orf88-209ENST00000495546 ADAM2Q99965 735 aa17.04■□□□□ 0.32
C2orf88-209ENST00000495546 KIFC3Q9BVG8 833 aa17.04■□□□□ 0.32
C2orf88-209ENST00000495546 TRAIPQ9BWF2 469 aa17.04■□□□□ 0.32
C2orf88-209ENST00000495546 TTC3P53804 2025 aa17.03■□□□□ 0.32
C2orf88-209ENST00000495546 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.03■□□□□ 0.32
C2orf88-209ENST00000495546 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.03■□□□□ 0.32
C2orf88-209ENST00000495546 C9IYK1 514 aa17.03■□□□□ 0.32
C2orf88-209ENST00000495546 AMHP03971 560 aa17.03■□□□□ 0.32
C2orf88-209ENST00000495546 EFNA5P52803 228 aa17.03■□□□□ 0.32
C2orf88-209ENST00000495546 FAM189BP81408 668 aa17.03■□□□□ 0.32
C2orf88-209ENST00000495546 DYMQ7RTS9 669 aa17.03■□□□□ 0.32
C2orf88-209ENST00000495546 TAS1R3Q7RTX0 852 aa17.03■□□□□ 0.32
C2orf88-209ENST00000495546 HERC6Q8IVU3 1022 aa17.03■□□□□ 0.32
C2orf88-209ENST00000495546 ZBTB8OSQ8IWT0 167 aa17.03■□□□□ 0.32
C2orf88-209ENST00000495546 DEPTORQ8TB45 409 aa17.03■□□□□ 0.32
C2orf88-209ENST00000495546 STAMQ92783 540 aa17.03■□□□□ 0.32
C2orf88-209ENST00000495546 PRIMPOLQ96LW4 560 aa17.03■□□□□ 0.32
C2orf88-209ENST00000495546 TRIM9Q9C026 710 aa17.03■□□□□ 0.32
C2orf88-209ENST00000495546 LRRC27Q9C0I9 530 aa17.03■□□□□ 0.32
C2orf88-209ENST00000495546 PARVGQ9HBI0 331 aa17.03■□□□□ 0.32
C2orf88-209ENST00000495546 C1orf112Q9NSG2 853 aa17.03■□□□□ 0.32
C2orf88-209ENST00000495546 LARSQ9P2J5 1176 aaKnown RBP17.03■□□□□ 0.32
C2orf88-209ENST00000495546 USP25Q9UHP3 1055 aa17.03■□□□□ 0.32
C2orf88-209ENST00000495546 SERTAD1Q9UHV2 236 aa17.03■□□□□ 0.32
C2orf88-209ENST00000495546 KCNG1Q9UIX4 513 aa17.03■□□□□ 0.32
C2orf88-209ENST00000495546 CCDC169A6NNP5 214 aa17.02■□□□□ 0.32
C2orf88-209ENST00000495546 TBCAO75347 108 aaKnown RBP17.02■□□□□ 0.32
C2orf88-209ENST00000495546 GJB5O95377 273 aa17.02■□□□□ 0.32
C2orf88-209ENST00000495546 EDN1P05305 212 aa17.02■□□□□ 0.32
C2orf88-209ENST00000495546 KRT18P05783 430 aaKnown RBP17.02■□□□□ 0.32
C2orf88-209ENST00000495546 AXLP30530 894 aa17.02■□□□□ 0.32
C2orf88-209ENST00000495546 SYKP43405 635 aa17.02■□□□□ 0.32
C2orf88-209ENST00000495546 NCKAP1LP55160 1127 aa17.02■□□□□ 0.32
C2orf88-209ENST00000495546 SMAD3P84022 425 aaKnown RBP17.02■□□□□ 0.32
C2orf88-209ENST00000495546 CSPP1Q1MSJ5 1256 aa17.02■□□□□ 0.32
C2orf88-209ENST00000495546 LONRF3Q496Y0 759 aa17.02■□□□□ 0.32
C2orf88-209ENST00000495546 SLC24A5Q71RS6 500 aa17.02■□□□□ 0.32
C2orf88-209ENST00000495546 TMCO2Q7Z6W1 182 aaPredicted RBP17.02■□□□□ 0.32
C2orf88-209ENST00000495546 MYOCDQ8IZQ8 938 aa17.02■□□□□ 0.32
C2orf88-209ENST00000495546 TMEM161BQ8NDZ6 487 aa17.02■□□□□ 0.32
C2orf88-209ENST00000495546 ENGASEQ8NFI3 743 aa17.02■□□□□ 0.32
C2orf88-209ENST00000495546 C7orf25Q9BPX7 421 aa17.02■□□□□ 0.32
C2orf88-209ENST00000495546 TMEM134Q9H6X4 195 aa17.02■□□□□ 0.32
C2orf88-209ENST00000495546 RC3H2Q9HBD1 1191 aaKnown RBP17.02■□□□□ 0.32
C2orf88-209ENST00000495546 KMT5AQ9NQR1 393 aa17.02■□□□□ 0.32
C2orf88-209ENST00000495546 PRMT7Q9NVM4 692 aaPredicted RBP17.02■□□□□ 0.32
C2orf88-209ENST00000495546 PIN4Q9Y237 131 aaKnown RBP17.02■□□□□ 0.32
C2orf88-209ENST00000495546 PHLPP2Q6ZVD8 1323 aa17.01■□□□□ 0.31
C2orf88-209ENST00000495546 CNTNAP2Q9UHC6 1331 aa17.01■□□□□ 0.31
C2orf88-209ENST00000495546 DENND3A2RUS2 1198 aa17.01■□□□□ 0.31
C2orf88-209ENST00000495546 GRXCR1A8MXD5 290 aa17.01■□□□□ 0.31
C2orf88-209ENST00000495546 SOX1O00570 391 aaPredicted RBP17.01■□□□□ 0.31
C2orf88-209ENST00000495546 ACKR2O00590 384 aa17.01■□□□□ 0.31
C2orf88-209ENST00000495546 SLC16A4O15374 487 aa17.01■□□□□ 0.31
C2orf88-209ENST00000495546 B4GALT5O43286 388 aa17.01■□□□□ 0.31
C2orf88-209ENST00000495546 ERLIN2O94905 339 aa17.01■□□□□ 0.31
C2orf88-209ENST00000495546 FAM13AO94988 1023 aa17.01■□□□□ 0.31
C2orf88-209ENST00000495546 ZSCAN20P17040 1043 aaPredicted RBP17.01■□□□□ 0.31
C2orf88-209ENST00000495546 ARF4P18085 180 aaPredicted RBP17.01■□□□□ 0.31
C2orf88-209ENST00000495546 SARSP49591 514 aaKnown RBP17.01■□□□□ 0.31
C2orf88-209ENST00000495546 AMPD3Q01432 767 aa17.01■□□□□ 0.31
C2orf88-209ENST00000495546 SNW1Q13573 536 aaKnown RBP17.01■□□□□ 0.31
C2orf88-209ENST00000495546 MAPK6Q16659 721 aa17.01■□□□□ 0.31
C2orf88-209ENST00000495546 UBXN11Q5T124 520 aa17.01■□□□□ 0.31
C2orf88-209ENST00000495546 FMR1NBQ8N0W7 255 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms