RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 YEATS4O95619 227 aa18.97■□□□□ 0.63
SNX17-209ENST00000494893 PLA2G4BP0C869 781 aa18.97■□□□□ 0.63
SNX17-209ENST00000494893 DNM1Q05193 864 aaKnown RBP18.97■□□□□ 0.63
SNX17-209ENST00000494893 TFDP1Q14186 410 aa18.97■□□□□ 0.63
SNX17-209ENST00000494893 ADGRE1Q14246 886 aa18.97■□□□□ 0.63
SNX17-209ENST00000494893 STK38Q15208 465 aa18.97■□□□□ 0.63
SNX17-209ENST00000494893 ARSHQ5FYA8 562 aa18.97■□□□□ 0.63
SNX17-209ENST00000494893 CDCA2Q69YH5 1023 aaPredicted RBP18.97■□□□□ 0.63
SNX17-209ENST00000494893 ZNF598Q86UK7 904 aaKnown RBP18.97■□□□□ 0.63
SNX17-209ENST00000494893 ECHDC2Q86YB7 292 aa18.97■□□□□ 0.63
SNX17-209ENST00000494893 KCTD17Q8N5Z5 321 aa18.97■□□□□ 0.63
SNX17-209ENST00000494893 KRI1Q8N9T8 703 aaKnown RBP18.97■□□□□ 0.63
SNX17-209ENST00000494893 CDK5RAP3Q96JB5 506 aa18.97■□□□□ 0.63
SNX17-209ENST00000494893 C17orf80Q9BSJ5 609 aa18.97■□□□□ 0.63
SNX17-209ENST00000494893 CHST12Q9NRB3 414 aa18.97■□□□□ 0.63
SNX17-209ENST00000494893 PIN4Q9Y237 131 aaKnown RBP18.97■□□□□ 0.63
SNX17-209ENST00000494893 TCHHQ07283 1943 aa18.96■□□□□ 0.63
SNX17-209ENST00000494893 TRANK1O15050 2925 aa18.96■□□□□ 0.63
SNX17-209ENST00000494893 A0A087X0B3 334 aa18.96■□□□□ 0.63
SNX17-209ENST00000494893 LRRIQ4A6NIV6 560 aa18.96■□□□□ 0.63
SNX17-209ENST00000494893 SPTLC2O15270 562 aa18.96■□□□□ 0.63
SNX17-209ENST00000494893 TSPAN1O60635 241 aa18.96■□□□□ 0.63
SNX17-209ENST00000494893 HIP1RO75146 1068 aa18.96■□□□□ 0.63
SNX17-209ENST00000494893 EDN1P05305 212 aa18.96■□□□□ 0.63
SNX17-209ENST00000494893 ZSCAN20P17040 1043 aaPredicted RBP18.96■□□□□ 0.63
SNX17-209ENST00000494893 ERVK-21P61565 698 aa18.96■□□□□ 0.63
SNX17-209ENST00000494893 UBXN11Q5T124 520 aa18.96■□□□□ 0.63
SNX17-209ENST00000494893 CALML4Q96GE6 196 aa18.96■□□□□ 0.63
SNX17-209ENST00000494893 KIFC3Q9BVG8 833 aa18.96■□□□□ 0.63
SNX17-209ENST00000494893 TRAIPQ9BWF2 469 aa18.96■□□□□ 0.63
SNX17-209ENST00000494893 ELAC1Q9H777 363 aaKnown RBP18.96■□□□□ 0.63
SNX17-209ENST00000494893 TMEM161AQ9NX61 479 aa18.96■□□□□ 0.63
SNX17-209ENST00000494893 NPHP3-ACAD11A0A0J9YXS1 232 aa18.95■□□□□ 0.62
SNX17-209ENST00000494893 A0A0U1RQF3 1178 aa18.95■□□□□ 0.62
SNX17-209ENST00000494893 TTLL13PA6NNM8 815 aa18.95■□□□□ 0.62
SNX17-209ENST00000494893 INO80B-WBP1J3KQ70 363 aa18.95■□□□□ 0.62
SNX17-209ENST00000494893 B4GALT5O43286 388 aa18.95■□□□□ 0.62
SNX17-209ENST00000494893 PPP6R2O75170 966 aa18.95■□□□□ 0.62
SNX17-209ENST00000494893 SSBP05455 408 aaKnown RBP eCLIP18.95■□□□□ 0.62
SNX17-209ENST00000494893 STAG3L1P0CL83 205 aa18.95■□□□□ 0.62
SNX17-209ENST00000494893 FGFR1P11362 822 aa18.95■□□□□ 0.62
SNX17-209ENST00000494893 GUCY2CP25092 1073 aa18.95■□□□□ 0.62
SNX17-209ENST00000494893 MCM6Q14566 821 aa18.95■□□□□ 0.62
SNX17-209ENST00000494893 NAALADL2Q58DX5 795 aa18.95■□□□□ 0.62
SNX17-209ENST00000494893 AXDND1Q5T1B0 1012 aaPredicted RBP18.95■□□□□ 0.62
SNX17-209ENST00000494893 ARNTL2Q8WYA1 636 aa18.95■□□□□ 0.62
SNX17-209ENST00000494893 RAD54LQ92698 747 aa18.95■□□□□ 0.62
SNX17-209ENST00000494893 KIFAP3Q92845 792 aa18.95■□□□□ 0.62
SNX17-209ENST00000494893 GBP4Q96PP9 640 aa18.95■□□□□ 0.62
SNX17-209ENST00000494893 CCDC113Q9H0I3 377 aa18.95■□□□□ 0.62
SNX17-209ENST00000494893 HCSTQ9UBK5 93 aa18.95■□□□□ 0.62
SNX17-209ENST00000494893 MTUS1Q9ULD2 1270 aa18.95■□□□□ 0.62
SNX17-209ENST00000494893 PCDHB7Q9Y5E2 793 aa18.95■□□□□ 0.62
SNX17-209ENST00000494893 MEIS3P2A8K0S8 358 aa18.94■□□□□ 0.62
SNX17-209ENST00000494893 SFI1A8K8P3 1242 aa18.94■□□□□ 0.62
SNX17-209ENST00000494893 LPXNO60711 386 aa18.94■□□□□ 0.62
SNX17-209ENST00000494893 NAMPTP43490 491 aa18.94■□□□□ 0.62
SNX17-209ENST00000494893 RAD51AP2Q09MP3 1159 aa18.94■□□□□ 0.62
SNX17-209ENST00000494893 PAN2Q504Q3 1202 aaKnown RBP18.94■□□□□ 0.62
SNX17-209ENST00000494893 CPB2Q96IY4 423 aa18.94■□□□□ 0.62
SNX17-209ENST00000494893 TGS1Q96RS0 853 aaKnown RBP18.94■□□□□ 0.62
SNX17-209ENST00000494893 FZD8Q9H461 694 aa18.94■□□□□ 0.62
SNX17-209ENST00000494893 LRFN2Q9ULH4 789 aa18.94■□□□□ 0.62
SNX17-209ENST00000494893 USP20Q9Y2K6 914 aa18.94■□□□□ 0.62
SNX17-209ENST00000494893 MRPL42Q9Y6G3 142 aaKnown RBP18.94■□□□□ 0.62
SNX17-209ENST00000494893 ARF4P18085 180 aaPredicted RBP18.93■□□□□ 0.62
SNX17-209ENST00000494893 CACNB1Q02641 598 aaPredicted RBP18.93■□□□□ 0.62
SNX17-209ENST00000494893 BTG3Q14201 252 aaPredicted RBP18.93■□□□□ 0.62
SNX17-209ENST00000494893 CLLU1OSQ5K130 101 aa18.93■□□□□ 0.62
SNX17-209ENST00000494893 TWF2Q6IBS0 349 aaKnown RBP18.93■□□□□ 0.62
SNX17-209ENST00000494893 SHC4Q6S5L8 630 aa18.93■□□□□ 0.62
SNX17-209ENST00000494893 PPP4R3CPQ6ZMV5 832 aa18.93■□□□□ 0.62
SNX17-209ENST00000494893 CMTR2Q8IYT2 770 aaKnown RBP18.93■□□□□ 0.62
SNX17-209ENST00000494893 LPPQ93052 612 aa18.93■□□□□ 0.62
SNX17-209ENST00000494893 FAM105AQ9NUU6 356 aa18.93■□□□□ 0.62
SNX17-209ENST00000494893 DACT1Q9NYF0 836 aa18.93■□□□□ 0.62
SNX17-209ENST00000494893 RCOR1Q9UKL0 485 aa18.93■□□□□ 0.62
SNX17-209ENST00000494893 STXBP5LQ9Y2K9 1186 aa18.93■□□□□ 0.62
SNX17-209ENST00000494893 COL4A4P53420 1690 aaPredicted RBP18.92■□□□□ 0.62
SNX17-209ENST00000494893 ZNF623O75123 536 aa18.92■□□□□ 0.62
SNX17-209ENST00000494893 NPTX2P47972 431 aa18.92■□□□□ 0.62
SNX17-209ENST00000494893 DHX8Q14562 1220 aaKnown RBP18.92■□□□□ 0.62
SNX17-209ENST00000494893 PCBP1Q15365 356 aaKnown RBP eCLIP18.92■□□□□ 0.62
SNX17-209ENST00000494893 FAM187BQ17R55 369 aa18.92■□□□□ 0.62
SNX17-209ENST00000494893 ATL3Q6DD88 541 aa18.92■□□□□ 0.62
SNX17-209ENST00000494893 TAS1R3Q7RTX0 852 aa18.92■□□□□ 0.62
SNX17-209ENST00000494893 GPBP1Q86WP2 473 aa18.92■□□□□ 0.62
SNX17-209ENST00000494893 CDR2LQ86X02 465 aaPredicted RBP18.92■□□□□ 0.62
SNX17-209ENST00000494893 FIBCD1Q8N539 461 aa18.92■□□□□ 0.62
SNX17-209ENST00000494893 LARP4BQ92615 738 aaKnown RBP18.92■□□□□ 0.62
SNX17-209ENST00000494893 CLP1Q92989 425 aaKnown RBP18.92■□□□□ 0.62
SNX17-209ENST00000494893 CASD1Q96PB1 797 aa18.92■□□□□ 0.62
SNX17-209ENST00000494893 EIF2AQ9BY44 585 aaKnown RBP18.92■□□□□ 0.62
SNX17-209ENST00000494893 PCDHA7Q9UN72 937 aa18.92■□□□□ 0.62
SNX17-209ENST00000494893 COL6A3P12111 3177 aa18.91■□□□□ 0.62
SNX17-209ENST00000494893 TBKBP1A7MCY6 615 aa18.91■□□□□ 0.62
SNX17-209ENST00000494893 CUTAO60888 179 aa18.91■□□□□ 0.62
SNX17-209ENST00000494893 ERLIN2O94905 339 aa18.91■□□□□ 0.62
SNX17-209ENST00000494893 EOMESO95936 686 aa18.91■□□□□ 0.62
SNX17-209ENST00000494893 PEX3P56589 373 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms