RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 CRIPAKQ8N1N5 446 aa17.64■□□□□ 0.41
LIME1-209ENST00000494776 DEPTORQ8TB45 409 aa17.64■□□□□ 0.41
LIME1-209ENST00000494776 NFKBIZQ9BYH8 718 aa17.64■□□□□ 0.41
LIME1-209ENST00000494776 C2orf40Q9H1Z8 148 aa17.64■□□□□ 0.41
LIME1-209ENST00000494776 TFIP11Q9UBB9 837 aaKnown RBP17.64■□□□□ 0.41
LIME1-209ENST00000494776 DAXXQ9UER7 740 aaPredicted RBP17.64■□□□□ 0.41
LIME1-209ENST00000494776 FBXO2Q9UK22 296 aaPredicted RBP17.64■□□□□ 0.41
LIME1-209ENST00000494776 RWDD3Q9Y3V2 267 aa17.64■□□□□ 0.41
LIME1-209ENST00000494776 EPOPA6NHQ4 379 aa17.63■□□□□ 0.41
LIME1-209ENST00000494776 EOMESO95936 686 aa17.63■□□□□ 0.41
LIME1-209ENST00000494776 PLA2G4BP0C869 781 aa17.63■□□□□ 0.41
LIME1-209ENST00000494776 FGFR1P11362 822 aa17.63■□□□□ 0.41
LIME1-209ENST00000494776 CTNNB1P35222 781 aa17.63■□□□□ 0.41
LIME1-209ENST00000494776 RAB27AP51159 221 aa17.63■□□□□ 0.41
LIME1-209ENST00000494776 MBTD1Q05BQ5 628 aa17.63■□□□□ 0.41
LIME1-209ENST00000494776 KARSQ15046 597 aaKnown RBP17.63■□□□□ 0.41
LIME1-209ENST00000494776 TMEM132AQ24JP5 1023 aa17.63■□□□□ 0.41
LIME1-209ENST00000494776 TMEM119Q4V9L6 283 aa17.63■□□□□ 0.41
LIME1-209ENST00000494776 EPC2Q52LR7 807 aa17.63■□□□□ 0.41
LIME1-209ENST00000494776 RINT1Q6NUQ1 792 aa17.63■□□□□ 0.41
LIME1-209ENST00000494776 IFNLR1Q8IU57 520 aaPredicted RBP17.63■□□□□ 0.41
LIME1-209ENST00000494776 MICALL1Q8N3F8 863 aa17.63■□□□□ 0.41
LIME1-209ENST00000494776 SYT2Q8N9I0 419 aaPredicted RBP17.63■□□□□ 0.41
LIME1-209ENST00000494776 KRI1Q8N9T8 703 aaKnown RBP17.63■□□□□ 0.41
LIME1-209ENST00000494776 MAFAQ8NHW3 353 aaPredicted RBP17.63■□□□□ 0.41
LIME1-209ENST00000494776 CLIC6Q96NY7 704 aa17.63■□□□□ 0.41
LIME1-209ENST00000494776 RUSC1Q9BVN2 902 aa17.63■□□□□ 0.41
LIME1-209ENST00000494776 RC3H2Q9HBD1 1191 aaKnown RBP17.63■□□□□ 0.41
LIME1-209ENST00000494776 FAM105AQ9NUU6 356 aa17.63■□□□□ 0.41
LIME1-209ENST00000494776 CCDC39Q9UFE4 941 aa17.63■□□□□ 0.41
LIME1-209ENST00000494776 COL6A3P12111 3177 aa17.63■□□□□ 0.41
LIME1-209ENST00000494776 HIP1RO75146 1068 aa17.62■□□□□ 0.41
LIME1-209ENST00000494776 LIG1P18858 919 aa17.62■□□□□ 0.41
LIME1-209ENST00000494776 AXLP30530 894 aa17.62■□□□□ 0.41
LIME1-209ENST00000494776 NAMPTP43490 491 aa17.62■□□□□ 0.41
LIME1-209ENST00000494776 NASPP49321 788 aaPredicted RBP17.62■□□□□ 0.41
LIME1-209ENST00000494776 PKP1Q13835 747 aa17.62■□□□□ 0.41
LIME1-209ENST00000494776 ADGRE1Q14246 886 aa17.62■□□□□ 0.41
LIME1-209ENST00000494776 DHX8Q14562 1220 aaKnown RBP17.62■□□□□ 0.41
LIME1-209ENST00000494776 NOTUMQ6P988 496 aa17.62■□□□□ 0.41
LIME1-209ENST00000494776 C1orf186Q6ZWK4 172 aa17.62■□□□□ 0.41
LIME1-209ENST00000494776 GDPD5Q8WTR4 605 aa17.62■□□□□ 0.41
LIME1-209ENST00000494776 PPM1EQ8WY54 764 aa17.62■□□□□ 0.41
LIME1-209ENST00000494776 BSNDQ8WZ55 320 aa17.62■□□□□ 0.41
LIME1-209ENST00000494776 SYMPKQ92797 1274 aaKnown RBP17.62■□□□□ 0.41
LIME1-209ENST00000494776 CPB2Q96IY4 423 aa17.62■□□□□ 0.41
LIME1-209ENST00000494776 EPSTI1Q96J88 318 aa17.62■□□□□ 0.41
LIME1-209ENST00000494776 DRC1Q96MC2 740 aa17.62■□□□□ 0.41
LIME1-209ENST00000494776 TIPINQ9BVW5 301 aa17.62■□□□□ 0.41
LIME1-209ENST00000494776 CCSER1Q9C0I3 900 aa17.62■□□□□ 0.41
LIME1-209ENST00000494776 MRPL42Q9Y6G3 142 aaKnown RBP17.62■□□□□ 0.41
LIME1-209ENST00000494776 CCDC169A6NNP5 214 aa17.61■□□□□ 0.41
LIME1-209ENST00000494776 SPTLC2O15270 562 aa17.61■□□□□ 0.41
LIME1-209ENST00000494776 TSPAN1O60635 241 aa17.61■□□□□ 0.41
LIME1-209ENST00000494776 PLCG1P19174 1290 aa17.61■□□□□ 0.41
LIME1-209ENST00000494776 HOXA11P31270 313 aaPredicted RBP17.61■□□□□ 0.41
LIME1-209ENST00000494776 BMPR1AP36894 532 aa17.61■□□□□ 0.41
LIME1-209ENST00000494776 RAD51AP2Q09MP3 1159 aa17.61■□□□□ 0.41
LIME1-209ENST00000494776 LONRF3Q496Y0 759 aa17.61■□□□□ 0.41
LIME1-209ENST00000494776 LINC00301Q8NCQ3 95 aa17.61■□□□□ 0.41
LIME1-209ENST00000494776 PGBD4Q96DM1 585 aa17.61■□□□□ 0.41
LIME1-209ENST00000494776 TRAIPQ9BWF2 469 aa17.61■□□□□ 0.41
LIME1-209ENST00000494776 TMEM117Q9H0C3 514 aa17.61■□□□□ 0.41
LIME1-209ENST00000494776 PRMT7Q9NVM4 692 aaPredicted RBP17.61■□□□□ 0.41
LIME1-209ENST00000494776 KCND2Q9NZV8 630 aa17.61■□□□□ 0.41
LIME1-209ENST00000494776 PCDHB2Q9Y5E7 798 aa17.61■□□□□ 0.41
LIME1-209ENST00000494776 YEATS4O95619 227 aa17.6■□□□□ 0.41
LIME1-209ENST00000494776 KRT18P05783 430 aaKnown RBP17.6■□□□□ 0.41
LIME1-209ENST00000494776 SLC12A3P55017 1021 aa17.6■□□□□ 0.41
LIME1-209ENST00000494776 PEX3P56589 373 aa17.6■□□□□ 0.41
LIME1-209ENST00000494776 DMP1Q13316 513 aaPredicted RBP17.6■□□□□ 0.41
LIME1-209ENST00000494776 GPM6BQ13491 265 aa17.6■□□□□ 0.41
LIME1-209ENST00000494776 CCDC85BQ15834 202 aaPredicted RBP17.6■□□□□ 0.41
LIME1-209ENST00000494776 MAPK6Q16659 721 aa17.6■□□□□ 0.41
LIME1-209ENST00000494776 CDCA2Q69YH5 1023 aaPredicted RBP17.6■□□□□ 0.41
LIME1-209ENST00000494776 HELQQ8TDG4 1101 aa17.6■□□□□ 0.41
LIME1-209ENST00000494776 CLP1Q92989 425 aaKnown RBP17.6■□□□□ 0.41
LIME1-209ENST00000494776 CCDC51Q96ER9 411 aa17.6■□□□□ 0.41
LIME1-209ENST00000494776 C11orf84Q9BUA3 381 aaPredicted RBP17.6■□□□□ 0.41
LIME1-209ENST00000494776 TRIM6Q9C030 488 aaPredicted RBP17.6■□□□□ 0.41
LIME1-209ENST00000494776 AAASQ9NRG9 546 aa17.6■□□□□ 0.41
LIME1-209ENST00000494776 CFAP45Q9UL16 551 aa17.6■□□□□ 0.41
LIME1-209ENST00000494776 MORC2Q9Y6X9 1032 aaPredicted RBP17.6■□□□□ 0.41
LIME1-209ENST00000494776 COL4A6Q14031 1691 aa17.6■□□□□ 0.41
LIME1-209ENST00000494776 SFI1A8K8P3 1242 aa17.59■□□□□ 0.41
LIME1-209ENST00000494776 H3BNC9 293 aa17.59■□□□□ 0.41
LIME1-209ENST00000494776 B4GALT5O43286 388 aa17.59■□□□□ 0.41
LIME1-209ENST00000494776 ZNF623O75123 536 aa17.59■□□□□ 0.41
LIME1-209ENST00000494776 PPP6R2O75170 966 aa17.59■□□□□ 0.41
LIME1-209ENST00000494776 PRKCBP05771 671 aa17.59■□□□□ 0.41
LIME1-209ENST00000494776 RB1P06400 928 aa17.59■□□□□ 0.41
LIME1-209ENST00000494776 ARF4P18085 180 aaPredicted RBP17.59■□□□□ 0.41
LIME1-209ENST00000494776 GUCY2CP25092 1073 aa17.59■□□□□ 0.41
LIME1-209ENST00000494776 EFNA5P52803 228 aa17.59■□□□□ 0.41
LIME1-209ENST00000494776 RRAGBQ5VZM2 374 aa17.59■□□□□ 0.41
LIME1-209ENST00000494776 ATL3Q6DD88 541 aa17.59■□□□□ 0.41
LIME1-209ENST00000494776 USP49Q70CQ1 688 aa17.59■□□□□ 0.41
LIME1-209ENST00000494776 ZNF598Q86UK7 904 aaKnown RBP17.59■□□□□ 0.41
LIME1-209ENST00000494776 GPBP1Q86WP2 473 aa17.59■□□□□ 0.41
LIME1-209ENST00000494776 CNNM3Q8NE01 707 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms