RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 CSDE1O75534 798 aaKnown RBP16.42■□□□□ 0.22
PCCB-219ENST00000494742 BRD1O95696 1058 aa16.42■□□□□ 0.22
PCCB-219ENST00000494742 GALTP07902 379 aa16.42■□□□□ 0.22
PCCB-219ENST00000494742 CA8P35219 290 aa16.42■□□□□ 0.22
PCCB-219ENST00000494742 RARS2Q5T160 578 aaKnown RBP16.42■□□□□ 0.22
PCCB-219ENST00000494742 RHPN2Q8IUC4 686 aa16.42■□□□□ 0.22
PCCB-219ENST00000494742 EXOC8Q8IYI6 725 aa16.42■□□□□ 0.22
PCCB-219ENST00000494742 DAGLBQ8NCG7 672 aa16.42■□□□□ 0.22
PCCB-219ENST00000494742 SLC22A17Q8WUG5 538 aa16.42■□□□□ 0.22
PCCB-219ENST00000494742 NRDE2Q9H7Z3 1164 aa16.42■□□□□ 0.22
PCCB-219ENST00000494742 TBC1D13Q9NVG8 400 aa16.42■□□□□ 0.22
PCCB-219ENST00000494742 CDH22Q9UJ99 828 aa16.42■□□□□ 0.22
PCCB-219ENST00000494742 PIN4Q9Y237 131 aaKnown RBP16.42■□□□□ 0.22
PCCB-219ENST00000494742 PPME1Q9Y570 386 aa16.42■□□□□ 0.22
PCCB-219ENST00000494742 DDX11L8A8MPP1 907 aa16.41■□□□□ 0.22
PCCB-219ENST00000494742 DKC1O60832 514 aaKnown RBP eCLIP16.41■□□□□ 0.22
PCCB-219ENST00000494742 OFD1O75665 1012 aa16.41■□□□□ 0.22
PCCB-219ENST00000494742 PDGFBP01127 241 aaPredicted RBP16.41■□□□□ 0.22
PCCB-219ENST00000494742 PSMC5P62195 406 aa16.41■□□□□ 0.22
PCCB-219ENST00000494742 RNASELQ05823 741 aaKnown RBP16.41■□□□□ 0.22
PCCB-219ENST00000494742 CATSPER4Q7RTX7 472 aa16.41■□□□□ 0.22
PCCB-219ENST00000494742 TMEM173Q86WV6 379 aaPredicted RBP16.41■□□□□ 0.22
PCCB-219ENST00000494742 BLIDQ8IZY5 108 aa16.41■□□□□ 0.22
PCCB-219ENST00000494742 ETNPPLQ8TBG4 499 aa16.41■□□□□ 0.22
PCCB-219ENST00000494742 GJA10Q969M2 543 aa16.41■□□□□ 0.22
PCCB-219ENST00000494742 DBR1Q9UK59 544 aaKnown RBP16.41■□□□□ 0.22
PCCB-219ENST00000494742 CACNA1HO95180 2353 aa16.41■□□□□ 0.22
PCCB-219ENST00000494742 M0R2N6 131 aa16.4■□□□□ 0.22
PCCB-219ENST00000494742 REC8O95072 547 aa16.4■□□□□ 0.22
PCCB-219ENST00000494742 DEXIO95424 95 aa16.4■□□□□ 0.22
PCCB-219ENST00000494742 TDP2O95551 362 aa16.4■□□□□ 0.22
PCCB-219ENST00000494742 EPCAMP16422 314 aa16.4■□□□□ 0.22
PCCB-219ENST00000494742 CLCN5P51795 746 aa16.4■□□□□ 0.22
PCCB-219ENST00000494742 CCT2P78371 535 aaKnown RBP16.4■□□□□ 0.22
PCCB-219ENST00000494742 SSRP1Q08945 709 aaKnown RBP16.4■□□□□ 0.22
PCCB-219ENST00000494742 ANO5Q75V66 913 aa16.4■□□□□ 0.22
PCCB-219ENST00000494742 CABP7Q86V35 215 aa16.4■□□□□ 0.22
PCCB-219ENST00000494742 SKAP1Q86WV1 359 aa16.4■□□□□ 0.22
PCCB-219ENST00000494742 URGCPQ8TCY9 931 aa16.4■□□□□ 0.22
PCCB-219ENST00000494742 LPPQ93052 612 aa16.4■□□□□ 0.22
PCCB-219ENST00000494742 EMILIN2Q9BXX0 1053 aa16.4■□□□□ 0.22
PCCB-219ENST00000494742 SFXN1Q9H9B4 322 aa16.4■□□□□ 0.22
PCCB-219ENST00000494742 IFT122Q9HBG6 1241 aa16.4■□□□□ 0.22
PCCB-219ENST00000494742 NCOA5Q9HCD5 579 aaKnown RBP16.4■□□□□ 0.22
PCCB-219ENST00000494742 CYP26B1Q9NR63 512 aa16.4■□□□□ 0.22
PCCB-219ENST00000494742 AGPAT5Q9NUQ2 364 aa16.4■□□□□ 0.22
PCCB-219ENST00000494742 FAM86C1Q9NVL1 165 aa16.4■□□□□ 0.22
PCCB-219ENST00000494742 KANSL3Q9P2N6 904 aa16.4■□□□□ 0.22
PCCB-219ENST00000494742 CNTNAP2Q9UHC6 1331 aa16.4■□□□□ 0.22
PCCB-219ENST00000494742 PLXNA3P51805 1871 aa16.39■□□□□ 0.22
PCCB-219ENST00000494742 TMEM150BA6NC51 233 aa16.39■□□□□ 0.21
PCCB-219ENST00000494742 H0Y858 1186 aa16.39■□□□□ 0.21
PCCB-219ENST00000494742 EPB41L2O43491 1005 aaKnown RBP16.39■□□□□ 0.21
PCCB-219ENST00000494742 PPP2R5CQ13362 524 aa16.39■□□□□ 0.21
PCCB-219ENST00000494742 PTPN14Q15678 1187 aa16.39■□□□□ 0.21
PCCB-219ENST00000494742 ASTLQ6HA08 431 aaPredicted RBP16.39■□□□□ 0.21
PCCB-219ENST00000494742 SRGAP1Q7Z6B7 1085 aa16.39■□□□□ 0.21
PCCB-219ENST00000494742 MRPL10Q7Z7H8 261 aaKnown RBP16.39■□□□□ 0.21
PCCB-219ENST00000494742 GPR149Q86SP6 731 aa16.39■□□□□ 0.21
PCCB-219ENST00000494742 C12orf76Q8N812 135 aaPredicted RBP16.39■□□□□ 0.21
PCCB-219ENST00000494742 BCL7CQ8WUZ0 217 aaPredicted RBP16.39■□□□□ 0.21
PCCB-219ENST00000494742 AUTS2Q8WXX7 1259 aa16.39■□□□□ 0.21
PCCB-219ENST00000494742 SLC7A3Q8WY07 619 aa16.39■□□□□ 0.21
PCCB-219ENST00000494742 ACSF2Q96CM8 615 aaPredicted RBP16.39■□□□□ 0.21
PCCB-219ENST00000494742 ZNF274Q96GC6 653 aaPredicted RBP16.39■□□□□ 0.21
PCCB-219ENST00000494742 NLRP4Q96MN2 994 aa16.39■□□□□ 0.21
PCCB-219ENST00000494742 TMEM175Q9BSA9 504 aa16.39■□□□□ 0.21
PCCB-219ENST00000494742 LIMD1Q9UGP4 676 aa16.39■□□□□ 0.21
PCCB-219ENST00000494742 DDX25Q9UHL0 483 aaKnown RBP16.39■□□□□ 0.21
PCCB-219ENST00000494742 INPP5FQ9Y2H2 1132 aa16.39■□□□□ 0.21
PCCB-219ENST00000494742 PCDHB2Q9Y5E7 798 aa16.39■□□□□ 0.21
PCCB-219ENST00000494742 CPLX1O14810 134 aa16.38■□□□□ 0.21
PCCB-219ENST00000494742 ALDH2P05091 517 aa16.38■□□□□ 0.21
PCCB-219ENST00000494742 WEE2P0C1S8 567 aa16.38■□□□□ 0.21
PCCB-219ENST00000494742 QARSP47897 775 aaKnown RBP16.38■□□□□ 0.21
PCCB-219ENST00000494742 SLC11A1P49279 550 aa16.38■□□□□ 0.21
PCCB-219ENST00000494742 NONOQ15233 471 aaKnown RBP eCLIP16.38■□□□□ 0.21
PCCB-219ENST00000494742 CPLX2Q6PUV4 134 aaKnown RBP16.38■□□□□ 0.21
PCCB-219ENST00000494742 C15orf39Q6ZRI6 1047 aa16.38■□□□□ 0.21
PCCB-219ENST00000494742 RUFY3Q7L099 469 aa16.38■□□□□ 0.21
PCCB-219ENST00000494742 OTOP3Q7RTS5 596 aa16.38■□□□□ 0.21
PCCB-219ENST00000494742 KRT25Q7Z3Z0 450 aa16.38■□□□□ 0.21
PCCB-219ENST00000494742 KSR1Q8IVT5 923 aa16.38■□□□□ 0.21
PCCB-219ENST00000494742 TMEM105Q8N8V8 129 aa16.38■□□□□ 0.21
PCCB-219ENST00000494742 CNNM3Q8NE01 707 aa16.38■□□□□ 0.21
PCCB-219ENST00000494742 FAM20AQ96MK3 541 aa16.38■□□□□ 0.21
PCCB-219ENST00000494742 SH2D3AQ9BRG2 576 aa16.38■□□□□ 0.21
PCCB-219ENST00000494742 UBN1Q9NPG3 1134 aa16.38■□□□□ 0.21
PCCB-219ENST00000494742 DNAJB4Q9UDY4 337 aa16.38■□□□□ 0.21
PCCB-219ENST00000494742 SSX2IPQ9Y2D8 614 aa16.38■□□□□ 0.21
PCCB-219ENST00000494742 COL4A3BPQ9Y5P4 624 aa16.38■□□□□ 0.21
PCCB-219ENST00000494742 MEIS3P2A8K0S8 358 aa16.37■□□□□ 0.21
PCCB-219ENST00000494742 ASAP2O43150 1006 aa16.37■□□□□ 0.21
PCCB-219ENST00000494742 GAS2O43903 313 aaKnown RBP16.37■□□□□ 0.21
PCCB-219ENST00000494742 ASGR2P07307 311 aa16.37■□□□□ 0.21
PCCB-219ENST00000494742 RFC5P40937 340 aa16.37■□□□□ 0.21
PCCB-219ENST00000494742 NBL1P41271 181 aa16.37■□□□□ 0.21
PCCB-219ENST00000494742 CLCN4P51793 760 aa16.37■□□□□ 0.21
PCCB-219ENST00000494742 PCBP1Q15365 356 aaKnown RBP eCLIP16.37■□□□□ 0.21
PCCB-219ENST00000494742 NPY5RQ15761 445 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms